RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 PCP2Q8IVA1 136 aa8.14□□□□□ -1.11
NME3-201ENST00000219302 KRTAP9-8Q9BYQ0 159 aa8.14□□□□□ -1.11
NME3-201ENST00000219302 TRAV13-2A0A0B4J235 113 aa8.13□□□□□ -1.11
NME3-201ENST00000219302 TRBV7-7A0A0K0K1E9 115 aa8.13□□□□□ -1.11
NME3-201ENST00000219302 F8WEM9 126 aa8.12□□□□□ -1.11
NME3-201ENST00000219302 OBSCN-AS1Q96MR7 158 aa8.12□□□□□ -1.11
NME3-201ENST00000219302 Q6JHZ5 121 aa8.11□□□□□ -1.11
NME3-201ENST00000219302 IGFL1Q6UW32 110 aa8.11□□□□□ -1.11
NME3-201ENST00000219302 LINC00575Q6W349 94 aa8.11□□□□□ -1.11
NME3-201ENST00000219302 KRTDAPP60985 99 aa8.09□□□□□ -1.11
NME3-201ENST00000219302 CLEC2BQ92478 149 aa8.09□□□□□ -1.11
NME3-201ENST00000219302 CFC1P0CG37 223 aa8.08□□□□□ -1.12
NME3-201ENST00000219302 OCIAD2Q56VL3 154 aa8.08□□□□□ -1.12
NME3-201ENST00000219302 Q6ZQY7 126 aa8.08□□□□□ -1.12
NME3-201ENST00000219302 VAMP3Q15836 100 aa8.07□□□□□ -1.12
NME3-201ENST00000219302 COA6Q5JTJ3 125 aaKnown RBP8.07□□□□□ -1.12
NME3-201ENST00000219302 hADV29S1A0JD25 119 aa8.06□□□□□ -1.12
NME3-201ENST00000219302 ATOH7Q8N100 152 aa8.06□□□□□ -1.12
NME3-201ENST00000219302 C20orf202A1L168 122 aa8.04□□□□□ -1.12
NME3-201ENST00000219302 Q96NJ1 140 aa8.04□□□□□ -1.12
NME3-201ENST00000219302 C20orf166-AS1Q96NR2 134 aa8.02□□□□□ -1.13
NME3-201ENST00000219302 LST1O00453 97 aa8.01□□□□□ -1.13
NME3-201ENST00000219302 FCGBPQ9Y6R7 5405 aaPredicted RBP8.01□□□□□ -1.13
NME3-201ENST00000219302 A8MUU9 505 aa8□□□□□ -1.13
NME3-201ENST00000219302 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8□□□□□ -1.13
NME3-201ENST00000219302 PPDPFLQ8WWR9 84 aa7.98□□□□□ -1.13
NME3-201ENST00000219302 H3BUT2 72 aa7.97□□□□□ -1.13
NME3-201ENST00000219302 SNRPEP62304 92 aaKnown RBP7.97□□□□□ -1.13
NME3-201ENST00000219302 SNHG12Q9BXW3 62 aa7.97□□□□□ -1.13
NME3-201ENST00000219302 MT2AP02795 61 aa7.96□□□□□ -1.14
NME3-201ENST00000219302 TRBV20-1A0A075B6N2 111 aa7.95□□□□□ -1.14
NME3-201ENST00000219302 SCGB1D1O95968 90 aa7.94□□□□□ -1.14
NME3-201ENST00000219302 LCE2BO14633 110 aa7.93□□□□□ -1.14
NME3-201ENST00000219302 S100A1P23297 94 aa7.92□□□□□ -1.14
NME3-201ENST00000219302 SS18L2Q9UHA2 77 aa7.92□□□□□ -1.14
NME3-201ENST00000219302 KRTAP16-1A8MUX0 517 aa7.91□□□□□ -1.14
NME3-201ENST00000219302 BVES-AS1Q5T3Y7 98 aa7.91□□□□□ -1.14
NME3-201ENST00000219302 MT1FP04733 61 aa7.9□□□□□ -1.14
NME3-201ENST00000219302 TEN1Q86WV5 123 aa7.9□□□□□ -1.14
NME3-201ENST00000219302 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.14
NME3-201ENST00000219302 KRTAP9-3Q9BYQ3 159 aa7.89□□□□□ -1.15
NME3-201ENST00000219302 DSCR10P59022 87 aa7.87□□□□□ -1.15
NME3-201ENST00000219302 C12orf57Q99622 126 aa7.87□□□□□ -1.15
NME3-201ENST00000219302 A0A087WSZ3 146 aa7.86□□□□□ -1.15
NME3-201ENST00000219302 MPLKIPQ8TAP9 179 aa7.86□□□□□ -1.15
NME3-201ENST00000219302 NDUFV3P56181 108 aaKnown RBP7.85□□□□□ -1.15
NME3-201ENST00000219302 HSBP1L1C9JCN9 74 aa7.83□□□□□ -1.16
NME3-201ENST00000219302 HRES1P13985 223 aa7.82□□□□□ -1.16
NME3-201ENST00000219302 FAM218AQ96MZ4 157 aa7.82□□□□□ -1.16
NME3-201ENST00000219302 HIST1H4GQ99525 98 aa7.82□□□□□ -1.16
NME3-201ENST00000219302 MACF1Q9UPN3 7388 aaKnown RBP7.82□□□□□ -1.16
NME3-201ENST00000219302 FAM236DA0A1B0GTK5 79 aa7.81□□□□□ -1.16
NME3-201ENST00000219302 FAM236CP0DP71 79 aa7.81□□□□□ -1.16
NME3-201ENST00000219302 KRTAP10-10P60014 251 aa7.81□□□□□ -1.16
NME3-201ENST00000219302 HIST3H2BBQ8N257 126 aa7.81□□□□□ -1.16
NME3-201ENST00000219302 HIST1H2BLQ99880 126 aa7.81□□□□□ -1.16
NME3-201ENST00000219302 LINC00313P59037 77 aa7.8□□□□□ -1.16
NME3-201ENST00000219302 A0A1W2PNM2 257 aa7.79□□□□□ -1.16
NME3-201ENST00000219302 H0YGX0 51 aa7.79□□□□□ -1.16
NME3-201ENST00000219302 H3BMG7 143 aa7.79□□□□□ -1.16
NME3-201ENST00000219302 NOTCH2NLQ7Z3S9 236 aa7.78□□□□□ -1.16
NME3-201ENST00000219302 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
NME3-201ENST00000219302 SNCGO76070 127 aa7.77□□□□□ -1.17
NME3-201ENST00000219302 SYNE2Q8WXH0 6885 aaKnown RBP7.77□□□□□ -1.17
NME3-201ENST00000219302 SIGMAR1Q99720 223 aa7.76□□□□□ -1.17
NME3-201ENST00000219302 COX8AP10176 69 aa7.75□□□□□ -1.17
NME3-201ENST00000219302 IGKV4-1P06312 121 aa7.74□□□□□ -1.17
NME3-201ENST00000219302 DLEU1O43261 78 aa7.73□□□□□ -1.17
NME3-201ENST00000219302 S100A2P29034 98 aa7.73□□□□□ -1.17
NME3-201ENST00000219302 RAB37Q96AX2 223 aa7.73□□□□□ -1.17
NME3-201ENST00000219302 A0A0B4J2C4 111 aa7.72□□□□□ -1.17
NME3-201ENST00000219302 A0A1B0GX51 115 aa7.72□□□□□ -1.17
NME3-201ENST00000219302 FABP2P12104 132 aa7.72□□□□□ -1.17
NME3-201ENST00000219302 TRBV7-4A0A0J9YYF1 115 aa7.7□□□□□ -1.18
NME3-201ENST00000219302 GHRHP01286 108 aa7.7□□□□□ -1.18
NME3-201ENST00000219302 LINC00472Q9H8W2 130 aa7.7□□□□□ -1.18
NME3-201ENST00000219302 KRTAP19-6Q3LI70 58 aa7.69□□□□□ -1.18
NME3-201ENST00000219302 DEFB116Q30KQ4 102 aa7.67□□□□□ -1.18
NME3-201ENST00000219302 ANKRD29Q8N6D5 301 aa7.67□□□□□ -1.18
NME3-201ENST00000219302 HIGD1BQ9P298 99 aa7.67□□□□□ -1.18
NME3-201ENST00000219302 C14orf144Q96I85 54 aa7.65□□□□□ -1.18
NME3-201ENST00000219302 IGHV6-1A0A0B4J1U7 121 aa7.64□□□□□ -1.19
NME3-201ENST00000219302 LINC00846Q9NV44 126 aa7.64□□□□□ -1.19
NME3-201ENST00000219302 S100A6P06703 90 aa7.63□□□□□ -1.19
NME3-201ENST00000219302 C2orf91Q6ZV80 131 aa7.63□□□□□ -1.19
NME3-201ENST00000219302 PRO1854Q9UHT4 67 aa7.63□□□□□ -1.19
NME3-201ENST00000219302 MTURNQ8N3F0 131 aa7.62□□□□□ -1.19
NME3-201ENST00000219302 TRIAP1O43715 76 aa7.61□□□□□ -1.19
NME3-201ENST00000219302 A0A1B0GV72 72 aa7.6□□□□□ -1.19
NME3-201ENST00000219302 CEND1Q8N111 149 aa7.6□□□□□ -1.19
NME3-201ENST00000219302 CCKP06307 115 aa7.59□□□□□ -1.19
NME3-201ENST00000219302 SPINK7P58062 85 aa7.59□□□□□ -1.19
NME3-201ENST00000219302 C8orf87E5RJ46 101 aa7.58□□□□□ -1.2
NME3-201ENST00000219302 ZCCHC13Q8WW36 166 aaKnown RBP7.58□□□□□ -1.2
NME3-201ENST00000219302 ORMDL1Q9P0S3 153 aa7.58□□□□□ -1.2
NME3-201ENST00000219302 A0A1B0GVX0 72 aa7.57□□□□□ -1.2
NME3-201ENST00000219302 H3BQ85 93 aa7.57□□□□□ -1.2
NME3-201ENST00000219302 TRACP01848 142 aa7.57□□□□□ -1.2
NME3-201ENST00000219302 TMEM256-PLSCR3K7ERE1 68 aa7.56□□□□□ -1.2
NME3-201ENST00000219302 FXYD2P54710 66 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms