RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 A8MUN3 132 aa6.2□□□□□ -1.42
CCDC113-201ENST00000219299 CD164Q04900 197 aa6.2□□□□□ -1.42
CCDC113-201ENST00000219299 SPENQ96T58 3664 aaKnown RBP6.2□□□□□ -1.42
CCDC113-201ENST00000219299 C15orf56Q8N910 161 aa6.19□□□□□ -1.42
CCDC113-201ENST00000219299 A0A087WTM6 91 aa6.19□□□□□ -1.42
CCDC113-201ENST00000219299 Q6ZRX8 168 aa6.19□□□□□ -1.42
CCDC113-201ENST00000219299 PHF5AQ7RTV0 110 aaKnown RBP6.19□□□□□ -1.42
CCDC113-201ENST00000219299 LINC00476Q8WZB0 136 aa6.19□□□□□ -1.42
CCDC113-201ENST00000219299 H7BZZ5 65 aa6.19□□□□□ -1.42
CCDC113-201ENST00000219299 CSMD2Q7Z408 3487 aa6.18□□□□□ -1.42
CCDC113-201ENST00000219299 ATP11AUNQ6ZP68 121 aa6.18□□□□□ -1.42
CCDC113-201ENST00000219299 IGLV6-57P01721 117 aa6.17□□□□□ -1.42
CCDC113-201ENST00000219299 TRBV7-4A0A0J9YYF1 115 aa6.17□□□□□ -1.42
CCDC113-201ENST00000219299 FAM168BA1KXE4 195 aa6.16□□□□□ -1.42
CCDC113-201ENST00000219299 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
CCDC113-201ENST00000219299 EIF4EBP3O60516 100 aaPredicted RBP6.15□□□□□ -1.42
CCDC113-201ENST00000219299 VWFP04275 2813 aa6.15□□□□□ -1.43
CCDC113-201ENST00000219299 C7orf65Q6ZTY9 151 aa6.15□□□□□ -1.43
CCDC113-201ENST00000219299 IGKV2D-30A0A075B6S6 120 aa6.14□□□□□ -1.43
CCDC113-201ENST00000219299 IGKV2-30P06310 120 aa6.14□□□□□ -1.43
CCDC113-201ENST00000219299 COA5Q86WW8 74 aa6.14□□□□□ -1.43
CCDC113-201ENST00000219299 C9orf163Q8N9P6 203 aa6.14□□□□□ -1.43
CCDC113-201ENST00000219299 LOC101927531A0A1B0GV80 90 aa6.13□□□□□ -1.43
CCDC113-201ENST00000219299 SVEP1Q4LDE5 3571 aa6.13□□□□□ -1.43
CCDC113-201ENST00000219299 LINC01600Q96MT4 127 aa6.13□□□□□ -1.43
CCDC113-201ENST00000219299 TNP2Q05952 138 aa6.12□□□□□ -1.43
CCDC113-201ENST00000219299 K7EQZ3 153 aa6.12□□□□□ -1.43
CCDC113-201ENST00000219299 MOBPQ13875 183 aa6.12□□□□□ -1.43
CCDC113-201ENST00000219299 ST20-AS1Q8NBB2 130 aa6.12□□□□□ -1.43
CCDC113-201ENST00000219299 PKD1L1Q8TDX9 2849 aa6.11□□□□□ -1.43
CCDC113-201ENST00000219299 KRTAP21-3Q3LHN1 58 aa6.11□□□□□ -1.43
CCDC113-201ENST00000219299 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
CCDC113-201ENST00000219299 A8MWP4 228 aa6.11□□□□□ -1.43
CCDC113-201ENST00000219299 RPL37AP61513 92 aaKnown RBP6.11□□□□□ -1.43
CCDC113-201ENST00000219299 BSNQ9UPA5 3926 aa6.1□□□□□ -1.43
CCDC113-201ENST00000219299 EPM2AB3EWF7 344 aa6.1□□□□□ -1.43
CCDC113-201ENST00000219299 TENM3Q9P273 2699 aa6.1□□□□□ -1.43
CCDC113-201ENST00000219299 TYMSOSQ8TAI1 123 aa6.09□□□□□ -1.43
CCDC113-201ENST00000219299 FAM104AQ969W3 186 aa6.09□□□□□ -1.43
CCDC113-201ENST00000219299 LINC00528Q8N1L1 170 aa6.09□□□□□ -1.43
CCDC113-201ENST00000219299 SMR3BP02814 79 aaPredicted RBP6.09□□□□□ -1.44
CCDC113-201ENST00000219299 C9orf129Q5T035 196 aaKnown RBP6.08□□□□□ -1.44
CCDC113-201ENST00000219299 SPACA4Q8TDM5 124 aa6.08□□□□□ -1.44
CCDC113-201ENST00000219299 LCA10Q71F78 164 aa6.07□□□□□ -1.44
CCDC113-201ENST00000219299 UQCR11O14957 56 aa6.07□□□□□ -1.44
CCDC113-201ENST00000219299 KRTAP1-5Q9BYS1 174 aa6.07□□□□□ -1.44
CCDC113-201ENST00000219299 KCNQ1DNQ9H478 68 aa6.06□□□□□ -1.44
CCDC113-201ENST00000219299 PRR15Q8IV56 129 aa6.06□□□□□ -1.44
CCDC113-201ENST00000219299 CNBPP62633 177 aaKnown RBP6.06□□□□□ -1.44
CCDC113-201ENST00000219299 A0A1W2PNN7 141 aa6.05□□□□□ -1.44
CCDC113-201ENST00000219299 MRPL34Q9BQ48 92 aaKnown RBP6.05□□□□□ -1.44
CCDC113-201ENST00000219299 LINC00313P59037 77 aa6.04□□□□□ -1.44
CCDC113-201ENST00000219299 OBSCN-AS1Q96MR7 158 aa6.04□□□□□ -1.44
CCDC113-201ENST00000219299 TLX1NBP0CAT3 122 aa6.04□□□□□ -1.44
CCDC113-201ENST00000219299 IGLV1-50A0A075B6I6 118 aa6.04□□□□□ -1.44
CCDC113-201ENST00000219299 PLA2G2DQ9UNK4 145 aa6.04□□□□□ -1.44
CCDC113-201ENST00000219299 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
CCDC113-201ENST00000219299 TGP01266 2768 aa6.03□□□□□ -1.44
CCDC113-201ENST00000219299 IGLV8-61A0A075B6I0 122 aa6.03□□□□□ -1.44
CCDC113-201ENST00000219299 SPANXA2-OT1Q8N9U9 137 aa6.02□□□□□ -1.45
CCDC113-201ENST00000219299 MIR22HGQ0VDD5 57 aa6.01□□□□□ -1.45
CCDC113-201ENST00000219299 IGFL1Q6UW32 110 aa6.01□□□□□ -1.45
CCDC113-201ENST00000219299 J3QL48 77 aa6.01□□□□□ -1.45
CCDC113-201ENST00000219299 Q8N377 158 aa6.01□□□□□ -1.45
CCDC113-201ENST00000219299 CUBNO60494 3623 aa6.01□□□□□ -1.45
CCDC113-201ENST00000219299 Q1T7F1 81 aa6□□□□□ -1.45
CCDC113-201ENST00000219299 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
CCDC113-201ENST00000219299 SSBP3-AS1Q7Z2R9 100 aa5.99□□□□□ -1.45
CCDC113-201ENST00000219299 C8orf17Q9NRJ1 99 aa5.99□□□□□ -1.45
CCDC113-201ENST00000219299 LCE6AA0A183 80 aa5.98□□□□□ -1.45
CCDC113-201ENST00000219299 PSORS1C2Q9UIG4 136 aa5.98□□□□□ -1.45
CCDC113-201ENST00000219299 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.98□□□□□ -1.45
CCDC113-201ENST00000219299 ZNF861PO60384 105 aa5.98□□□□□ -1.45
CCDC113-201ENST00000219299 DMBT1Q9UGM3 2413 aaPredicted RBP5.98□□□□□ -1.45
CCDC113-201ENST00000219299 TENM2Q9NT68 2774 aa5.97□□□□□ -1.45
CCDC113-201ENST00000219299 Q5XG85 94 aa5.96□□□□□ -1.46
CCDC113-201ENST00000219299 OCR1Q9BZK8 76 aa5.96□□□□□ -1.46
CCDC113-201ENST00000219299 ANAPC11Q9NYG5 84 aa5.95□□□□□ -1.46
CCDC113-201ENST00000219299 A0A1B0GVX0 72 aa5.95□□□□□ -1.46
CCDC113-201ENST00000219299 KRTAP26-1Q6PEX3 210 aa5.94□□□□□ -1.46
CCDC113-201ENST00000219299 A0A1W2PNM2 257 aa5.94□□□□□ -1.46
CCDC113-201ENST00000219299 LINC00304Q8N9R0 145 aa5.94□□□□□ -1.46
CCDC113-201ENST00000219299 Q96NJ1 140 aa5.93□□□□□ -1.46
CCDC113-201ENST00000219299 IGLV7-43P04211 117 aa5.93□□□□□ -1.46
CCDC113-201ENST00000219299 IGLV5-48A0A075B6I7 105 aa5.92□□□□□ -1.46
CCDC113-201ENST00000219299 Q6ZR54 194 aa5.91□□□□□ -1.46
CCDC113-201ENST00000219299 IGLV5-37A0A075B6J1 123 aa5.91□□□□□ -1.46
CCDC113-201ENST00000219299 KRTAP10-2P60368 255 aa5.9□□□□□ -1.46
CCDC113-201ENST00000219299 RBM12B-AS1Q9P1G2 102 aa5.89□□□□□ -1.47
CCDC113-201ENST00000219299 CRIPTQ9P021 101 aa5.89□□□□□ -1.47
CCDC113-201ENST00000219299 A0A0G2JQZ4 141 aa5.89□□□□□ -1.47
CCDC113-201ENST00000219299 Q8NDZ9 215 aa5.88□□□□□ -1.47
CCDC113-201ENST00000219299 FP248Q71RG6 208 aaPredicted RBP5.88□□□□□ -1.47
CCDC113-201ENST00000219299 FLG2Q5D862 2391 aaPredicted RBP5.88□□□□□ -1.47
CCDC113-201ENST00000219299 Q75L30 129 aa5.87□□□□□ -1.47
CCDC113-201ENST00000219299 DSCR10P59022 87 aa5.87□□□□□ -1.47
CCDC113-201ENST00000219299 CYSTM1Q9H1C7 97 aa5.86□□□□□ -1.47
CCDC113-201ENST00000219299 KRTAP10-1P60331 282 aa5.86□□□□□ -1.47
CCDC113-201ENST00000219299 SPRR4Q96PI1 79 aa5.86□□□□□ -1.47
CCDC113-201ENST00000219299 PLAC8Q9NZF1 115 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms