RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 NREPQ16612 68 aa10.72□□□□□ -0.69
VRK1-201ENST00000216639 TGP01266 2768 aa10.72□□□□□ -0.69
VRK1-201ENST00000216639 ALMS1Q8TCU4 4167 aa10.72□□□□□ -0.69
VRK1-201ENST00000216639 IGLV8-61A0A075B6I0 122 aa10.72□□□□□ -0.69
VRK1-201ENST00000216639 PSORS1C2Q9UIG4 136 aa10.7□□□□□ -0.7
VRK1-201ENST00000216639 KRTAP10-2P60368 255 aa10.7□□□□□ -0.7
VRK1-201ENST00000216639 SPRR4Q96PI1 79 aa10.7□□□□□ -0.7
VRK1-201ENST00000216639 DNAH2Q9P225 4427 aa10.69□□□□□ -0.7
VRK1-201ENST00000216639 A0A087WVE0 104 aa10.68□□□□□ -0.7
VRK1-201ENST00000216639 IGFL1Q6UW32 110 aa10.68□□□□□ -0.7
VRK1-201ENST00000216639 ZNF706Q9Y5V0 76 aaPredicted RBP10.68□□□□□ -0.7
VRK1-201ENST00000216639 ATOX1O00244 68 aa10.67□□□□□ -0.7
VRK1-201ENST00000216639 DNAH17Q9UFH2 4485 aa10.66□□□□□ -0.7
VRK1-201ENST00000216639 CRYGAP11844 174 aa10.66□□□□□ -0.7
VRK1-201ENST00000216639 ZNF861PO60384 105 aa10.64□□□□□ -0.71
VRK1-201ENST00000216639 HECTD4Q9Y4D8 3996 aa10.63□□□□□ -0.71
VRK1-201ENST00000216639 BPY2O14599 106 aa10.63□□□□□ -0.71
VRK1-201ENST00000216639 SCXQ7RTU7 201 aa10.61□□□□□ -0.71
VRK1-201ENST00000216639 CIRBP-AS1Q8TBR5 109 aa10.61□□□□□ -0.71
VRK1-201ENST00000216639 LINC00483Q53H64 154 aa10.6□□□□□ -0.71
VRK1-201ENST00000216639 FAM30AQ9NZY2 134 aa10.6□□□□□ -0.71
VRK1-201ENST00000216639 Q6ZSA8 131 aa10.59□□□□□ -0.71
VRK1-201ENST00000216639 IGLV7-43P04211 117 aa10.58□□□□□ -0.72
VRK1-201ENST00000216639 A0A0G2JQZ4 141 aa10.58□□□□□ -0.72
VRK1-201ENST00000216639 KRTAP10-1P60331 282 aa10.58□□□□□ -0.72
VRK1-201ENST00000216639 LCE6AA0A183 80 aa10.57□□□□□ -0.72
VRK1-201ENST00000216639 A0A087WSZ3 146 aa10.55□□□□□ -0.72
VRK1-201ENST00000216639 RPL37AP61513 92 aaKnown RBP10.55□□□□□ -0.72
VRK1-201ENST00000216639 C9orf153Q5TBE3 101 aa10.55□□□□□ -0.72
VRK1-201ENST00000216639 IGLV9-49A0A0B4J1Y8 123 aa10.54□□□□□ -0.72
VRK1-201ENST00000216639 CCDC179H3BU77 68 aa10.54□□□□□ -0.72
VRK1-201ENST00000216639 LINC00336Q6ZUF6 198 aa10.54□□□□□ -0.72
VRK1-201ENST00000216639 FRAS1Q86XX4 4008 aa10.54□□□□□ -0.72
VRK1-201ENST00000216639 HYDINQ4G0P3 5121 aa10.53□□□□□ -0.72
VRK1-201ENST00000216639 UQCRQO14949 82 aa10.52□□□□□ -0.73
VRK1-201ENST00000216639 IGKV4-1P06312 121 aa10.52□□□□□ -0.73
VRK1-201ENST00000216639 COX7CP15954 63 aa10.52□□□□□ -0.73
VRK1-201ENST00000216639 SERP2Q8N6R1 65 aa10.51□□□□□ -0.73
VRK1-201ENST00000216639 Q8N9L7 120 aa10.5□□□□□ -0.73
VRK1-201ENST00000216639 SMIM20Q8N5G0 67 aa10.49□□□□□ -0.73
VRK1-201ENST00000216639 MOBPQ13875 183 aa10.45□□□□□ -0.74
VRK1-201ENST00000216639 DNAH8Q96JB1 4490 aa10.45□□□□□ -0.74
VRK1-201ENST00000216639 DNAH11Q96DT5 4516 aa10.44□□□□□ -0.74
VRK1-201ENST00000216639 DSCR10P59022 87 aa10.44□□□□□ -0.74
VRK1-201ENST00000216639 ANAPC11Q9NYG5 84 aa10.43□□□□□ -0.74
VRK1-201ENST00000216639 DNAH5Q8TE73 4624 aa10.43□□□□□ -0.74
VRK1-201ENST00000216639 TRAV7A0A075B6U4 112 aa10.41□□□□□ -0.74
VRK1-201ENST00000216639 FAT2Q9NYQ8 4349 aa10.4□□□□□ -0.74
VRK1-201ENST00000216639 K7EQZ3 153 aa10.4□□□□□ -0.74
VRK1-201ENST00000216639 SS18L2Q9UHA2 77 aa10.4□□□□□ -0.74
VRK1-201ENST00000216639 DEFB116Q30KQ4 102 aa10.39□□□□□ -0.75
VRK1-201ENST00000216639 PKD1P98161 4303 aa10.38□□□□□ -0.75
VRK1-201ENST00000216639 LINC00472Q9H8W2 130 aa10.38□□□□□ -0.75
VRK1-201ENST00000216639 J3KT08 172 aa10.38□□□□□ -0.75
VRK1-201ENST00000216639 SRRM2Q9UQ35 2752 aaKnown RBP10.37□□□□□ -0.75
VRK1-201ENST00000216639 HRCT1Q6UXD1 115 aa10.37□□□□□ -0.75
VRK1-201ENST00000216639 SSBP3-AS1Q7Z2R9 100 aa10.35□□□□□ -0.75
VRK1-201ENST00000216639 A0A1B0GVY2 172 aa10.34□□□□□ -0.75
VRK1-201ENST00000216639 HCG22E2RYF7 251 aa10.33□□□□□ -0.76
VRK1-201ENST00000216639 A8MWP4 228 aa10.33□□□□□ -0.76
VRK1-201ENST00000216639 SACSQ9NZJ4 4579 aa10.32□□□□□ -0.76
VRK1-201ENST00000216639 FAM229BQ4G0N7 80 aa10.32□□□□□ -0.76
VRK1-201ENST00000216639 CD164Q04900 197 aa10.31□□□□□ -0.76
VRK1-201ENST00000216639 PRR15Q8IV56 129 aa10.3□□□□□ -0.76
VRK1-201ENST00000216639 NDUFB1O75438 58 aa10.3□□□□□ -0.76
VRK1-201ENST00000216639 OCR1Q9BZK8 76 aa10.29□□□□□ -0.76
VRK1-201ENST00000216639 C20orf197Q8N268 126 aa10.28□□□□□ -0.76
VRK1-201ENST00000216639 Q96NJ1 140 aa10.27□□□□□ -0.77
VRK1-201ENST00000216639 A0A087X002 238 aa10.24□□□□□ -0.77
VRK1-201ENST00000216639 CDK2AP2O75956 126 aa10.24□□□□□ -0.77
VRK1-201ENST00000216639 SPINK6Q6UWN8 80 aa10.24□□□□□ -0.77
VRK1-201ENST00000216639 WFDC13Q8IUB5 93 aa10.24□□□□□ -0.77
VRK1-201ENST00000216639 CASC2Q6XLA1 102 aa10.22□□□□□ -0.77
VRK1-201ENST00000216639 KMT2CQ8NEZ4 4911 aaKnown RBP10.22□□□□□ -0.77
VRK1-201ENST00000216639 KRTAP1-4P0C5Y4 121 aa10.21□□□□□ -0.77
VRK1-201ENST00000216639 KLKP1Q107X0 134 aa10.21□□□□□ -0.77
VRK1-201ENST00000216639 KRTAP13-2Q52LG2 175 aa10.21□□□□□ -0.77
VRK1-201ENST00000216639 CYSTM1Q9H1C7 97 aa10.2□□□□□ -0.78
VRK1-201ENST00000216639 KRTAP29-1A8MX34 341 aaPredicted RBP10.19□□□□□ -0.78
VRK1-201ENST00000216639 PLA2G1BP04054 148 aaKnown RBP10.19□□□□□ -0.78
VRK1-201ENST00000216639 TMEM254Q8TBM7 123 aa10.19□□□□□ -0.78
VRK1-201ENST00000216639 TMEM258P61165 79 aa10.18□□□□□ -0.78
VRK1-201ENST00000216639 LRP1BQ9NZR2 4599 aa10.18□□□□□ -0.78
VRK1-201ENST00000216639 ASB16-AS1Q495Z4 193 aa10.17□□□□□ -0.78
VRK1-201ENST00000216639 SMR3BP02814 79 aaPredicted RBP10.16□□□□□ -0.78
VRK1-201ENST00000216639 SNURFQ9Y675 71 aa10.16□□□□□ -0.78
VRK1-201ENST00000216639 RYR2Q92736 4967 aa10.16□□□□□ -0.78
VRK1-201ENST00000216639 MMP24-AS1A0A0U1RRL7 71 aa10.16□□□□□ -0.78
VRK1-201ENST00000216639 A0A1B0GVX0 72 aa10.16□□□□□ -0.78
VRK1-201ENST00000216639 NDUFC1O43677 76 aa10.15□□□□□ -0.78
VRK1-201ENST00000216639 hDV103S1A0JD37 113 aa10.13□□□□□ -0.79
VRK1-201ENST00000216639 C5orf47Q569G3 176 aa10.13□□□□□ -0.79
VRK1-201ENST00000216639 Q5XG85 94 aa10.13□□□□□ -0.79
VRK1-201ENST00000216639 IGHV6-1A0A0B4J1U7 121 aa10.13□□□□□ -0.79
VRK1-201ENST00000216639 TYMSOSQ8TAI1 123 aa10.13□□□□□ -0.79
VRK1-201ENST00000216639 C8orf17Q9NRJ1 99 aa10.13□□□□□ -0.79
VRK1-201ENST00000216639 C4orf48Q5BLP8 95 aa10.12□□□□□ -0.79
VRK1-201ENST00000216639 LIMD2Q9BT23 127 aa10.12□□□□□ -0.79
VRK1-201ENST00000216639 A0A0U1RQV1 116 aa10.11□□□□□ -0.79
VRK1-201ENST00000216639 PKHD1P08F94 4074 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms