RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 CDK2AP2O75956 126 aa3.79□□□□□ -1.8
SCN3A-210ENST00000640652 PRR34Q9NV39 138 aa3.79□□□□□ -1.8
SCN3A-210ENST00000640652 SNURFQ9Y675 71 aa3.79□□□□□ -1.8
SCN3A-210ENST00000640652 KRTAP1-3Q8IUG1 177 aa3.79□□□□□ -1.8
SCN3A-210ENST00000640652 FBN1P35555 2871 aaKnown RBP3.78□□□□□ -1.8
SCN3A-210ENST00000640652 CELA1Q9UNI1 258 aa3.78□□□□□ -1.8
SCN3A-210ENST00000640652 TRAV10A0A0B4J240 114 aa3.78□□□□□ -1.8
SCN3A-210ENST00000640652 ERC2-IT1O76042 136 aa3.78□□□□□ -1.8
SCN3A-210ENST00000640652 LINC01556Q5JQF7 62 aa3.78□□□□□ -1.8
SCN3A-210ENST00000640652 SCXQ7RTU7 201 aa3.77□□□□□ -1.81
SCN3A-210ENST00000640652 KLKP1Q107X0 134 aa3.77□□□□□ -1.81
SCN3A-210ENST00000640652 TMEM254Q8TBM7 123 aa3.77□□□□□ -1.81
SCN3A-210ENST00000640652 SPATA3Q8NHX4 192 aa3.77□□□□□ -1.81
SCN3A-210ENST00000640652 SMIM26A0A096LP01 95 aa3.77□□□□□ -1.81
SCN3A-210ENST00000640652 MRPL55Q7Z7F7 128 aaKnown RBP3.77□□□□□ -1.81
SCN3A-210ENST00000640652 C1orf137Q5JT78 98 aa3.76□□□□□ -1.81
SCN3A-210ENST00000640652 KIAA0087Q14695 138 aa3.76□□□□□ -1.81
SCN3A-210ENST00000640652 C10orf25Q5T742 122 aa3.76□□□□□ -1.81
SCN3A-210ENST00000640652 REG3GQ6UW15 175 aa3.76□□□□□ -1.81
SCN3A-210ENST00000640652 WFDC10BQ8IUB3 73 aa3.76□□□□□ -1.81
SCN3A-210ENST00000640652 Q6ZTC4 211 aa3.76□□□□□ -1.81
SCN3A-210ENST00000640652 SMR3AQ99954 134 aa3.76□□□□□ -1.81
SCN3A-210ENST00000640652 Q6ZRX8 168 aa3.75□□□□□ -1.81
SCN3A-210ENST00000640652 B9D2Q9BPU9 175 aa3.75□□□□□ -1.81
SCN3A-210ENST00000640652 NANOS2P60321 138 aaKnown RBP3.75□□□□□ -1.81
SCN3A-210ENST00000640652 LINC00474Q9P2X8 69 aa3.75□□□□□ -1.81
SCN3A-210ENST00000640652 OTOGQ6ZRI0 2925 aa3.75□□□□□ -1.81
SCN3A-210ENST00000640652 TRBV7-4A0A0J9YYF1 115 aa3.74□□□□□ -1.81
SCN3A-210ENST00000640652 Q6ZRU5 148 aa3.74□□□□□ -1.81
SCN3A-210ENST00000640652 UBE2AP49459 152 aa3.74□□□□□ -1.81
SCN3A-210ENST00000640652 V9GYY9 64 aa3.74□□□□□ -1.81
SCN3A-210ENST00000640652 RPL37AP8A6NKH3 93 aa3.73□□□□□ -1.81
SCN3A-210ENST00000640652 DNAH10OSP0CZ25 163 aa3.73□□□□□ -1.81
SCN3A-210ENST00000640652 KRTAP1-1Q07627 177 aa3.73□□□□□ -1.81
SCN3A-210ENST00000640652 VPREB1P12018 145 aa3.73□□□□□ -1.81
SCN3A-210ENST00000640652 LINC00528Q8N1L1 170 aa3.73□□□□□ -1.81
SCN3A-210ENST00000640652 KCNQ1DNQ9H478 68 aa3.73□□□□□ -1.81
SCN3A-210ENST00000640652 C9orf129Q5T035 196 aaKnown RBP3.73□□□□□ -1.81
SCN3A-210ENST00000640652 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
SCN3A-210ENST00000640652 C22orf24Q9Y442 160 aa3.72□□□□□ -1.81
SCN3A-210ENST00000640652 HCG22E2RYF7 251 aa3.72□□□□□ -1.81
SCN3A-210ENST00000640652 HRCT1Q6UXD1 115 aa3.72□□□□□ -1.81
SCN3A-210ENST00000640652 C7orf33Q8WU49 177 aa3.72□□□□□ -1.81
SCN3A-210ENST00000640652 IGKV2-24A0A0C4DH68 120 aa3.71□□□□□ -1.82
SCN3A-210ENST00000640652 WIPF1O43516 503 aa3.71□□□□□ -1.82
SCN3A-210ENST00000640652 Q6ZRP5 223 aa3.71□□□□□ -1.82
SCN3A-210ENST00000640652 ESRGQ1W209 222 aa3.71□□□□□ -1.82
SCN3A-210ENST00000640652 Q8NBF4 154 aa3.71□□□□□ -1.82
SCN3A-210ENST00000640652 C15orf56Q8N910 161 aa3.71□□□□□ -1.82
SCN3A-210ENST00000640652 HIGD2AQ9BW72 106 aa3.71□□□□□ -1.82
SCN3A-210ENST00000640652 TM2D3Q9BRN9 247 aa3.71□□□□□ -1.82
SCN3A-210ENST00000640652 RETNQ9HD89 108 aa3.71□□□□□ -1.82
SCN3A-210ENST00000640652 PRO0628Q9UI54 55 aa3.71□□□□□ -1.82
SCN3A-210ENST00000640652 H7BZZ5 65 aa3.7□□□□□ -1.82
SCN3A-210ENST00000640652 OXLD1Q5BKU9 147 aa3.7□□□□□ -1.82
SCN3A-210ENST00000640652 H0Y9J4 135 aa3.7□□□□□ -1.82
SCN3A-210ENST00000640652 MPLKIPQ8TAP9 179 aa3.7□□□□□ -1.82
SCN3A-210ENST00000640652 PLA2G2DQ9UNK4 145 aa3.7□□□□□ -1.82
SCN3A-210ENST00000640652 ZNF706Q9Y5V0 76 aaPredicted RBP3.7□□□□□ -1.82
SCN3A-210ENST00000640652 FAM30AQ9NZY2 134 aa3.69□□□□□ -1.82
SCN3A-210ENST00000640652 TLX1NBP0CAT3 122 aa3.69□□□□□ -1.82
SCN3A-210ENST00000640652 Q8N9L7 120 aa3.69□□□□□ -1.82
SCN3A-210ENST00000640652 NDUFS5O43920 106 aa3.68□□□□□ -1.82
SCN3A-210ENST00000640652 KRTAP10-3P60369 221 aa3.68□□□□□ -1.82
SCN3A-210ENST00000640652 IGKV4-1P06312 121 aa3.67□□□□□ -1.82
SCN3A-210ENST00000640652 C16orf90A8MZG2 172 aa3.67□□□□□ -1.82
SCN3A-210ENST00000640652 C4orf26Q17RF5 130 aa3.67□□□□□ -1.82
SCN3A-210ENST00000640652 Q9BRP9 147 aa3.67□□□□□ -1.82
SCN3A-210ENST00000640652 SMIM29Q86T20 159 aa3.67□□□□□ -1.82
SCN3A-210ENST00000640652 hDV103S1A0JD37 113 aa3.66□□□□□ -1.82
SCN3A-210ENST00000640652 IGLV5-48A0A075B6I7 105 aa3.66□□□□□ -1.82
SCN3A-210ENST00000640652 NUPR2A6NF83 97 aa3.66□□□□□ -1.82
SCN3A-210ENST00000640652 WFDC13Q8IUB5 93 aa3.66□□□□□ -1.82
SCN3A-210ENST00000640652 H3BPC8 53 aa3.66□□□□□ -1.82
SCN3A-210ENST00000640652 SERTAD4-AS1Q5TG53 156 aa3.65□□□□□ -1.82
SCN3A-210ENST00000640652 IGLV5-37A0A075B6J1 123 aa3.65□□□□□ -1.82
SCN3A-210ENST00000640652 PRLHP81277 87 aa3.65□□□□□ -1.82
SCN3A-210ENST00000640652 IGLV1-50A0A075B6I6 118 aa3.65□□□□□ -1.83
SCN3A-210ENST00000640652 TP53AIP1Q9HCN2 124 aa3.65□□□□□ -1.83
SCN3A-210ENST00000640652 LINC00588Q9Y4M8 146 aa3.65□□□□□ -1.83
SCN3A-210ENST00000640652 CASC2Q6XLA1 102 aa3.65□□□□□ -1.83
SCN3A-210ENST00000640652 LINC00476Q8WZB0 136 aa3.65□□□□□ -1.83
SCN3A-210ENST00000640652 A0A087WSZ3 146 aa3.64□□□□□ -1.83
SCN3A-210ENST00000640652 Q8N377 158 aa3.64□□□□□ -1.83
SCN3A-210ENST00000640652 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.64□□□□□ -1.83
SCN3A-210ENST00000640652 FAM168BA1KXE4 195 aa3.64□□□□□ -1.83
SCN3A-210ENST00000640652 ANK2Q01484 3957 aa3.64□□□□□ -1.83
SCN3A-210ENST00000640652 OCR1Q9BZK8 76 aa3.63□□□□□ -1.83
SCN3A-210ENST00000640652 H0Y9P7 68 aa3.63□□□□□ -1.83
SCN3A-210ENST00000640652 Q8NDZ9 215 aa3.63□□□□□ -1.83
SCN3A-210ENST00000640652 FLG2Q5D862 2391 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-210ENST00000640652 KRTAP10-11P60412 298 aa3.63□□□□□ -1.83
SCN3A-210ENST00000640652 SPRR4Q96PI1 79 aa3.63□□□□□ -1.83
SCN3A-210ENST00000640652 LIMD2Q9BT23 127 aa3.62□□□□□ -1.83
SCN3A-210ENST00000640652 A0A0U1RQV1 116 aa3.62□□□□□ -1.83
SCN3A-210ENST00000640652 K7EQZ3 153 aa3.62□□□□□ -1.83
SCN3A-210ENST00000640652 SRRM2Q9UQ35 2752 aaKnown RBP3.62□□□□□ -1.83
SCN3A-210ENST00000640652 LINC00208Q96KT6 92 aa3.62□□□□□ -1.83
SCN3A-210ENST00000640652 CYSTM1Q9H1C7 97 aa3.61□□□□□ -1.83
SCN3A-210ENST00000640652 CNBPP62633 177 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms