RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 RPL13AP40429 203 aaKnown RBP15.74■□□□□ 0.11
VEGFA-231ENST00000640499 MUSTN1Q8IVN3 82 aa15.74■□□□□ 0.11
VEGFA-231ENST00000640499 PPDPFQ9H3Y8 114 aa15.74■□□□□ 0.11
VEGFA-231ENST00000640499 CRYGAP11844 174 aa15.73■□□□□ 0.11
VEGFA-231ENST00000640499 IFITM1P13164 125 aa15.72■□□□□ 0.11
VEGFA-231ENST00000640499 FAM229BQ4G0N7 80 aa15.72■□□□□ 0.11
VEGFA-231ENST00000640499 Q6ZVH6 145 aa15.72■□□□□ 0.11
VEGFA-231ENST00000640499 ERC2-IT1O76042 136 aa15.71■□□□□ 0.11
VEGFA-231ENST00000640499 S100A12P80511 92 aa15.71■□□□□ 0.11
VEGFA-231ENST00000640499 SPRR4Q96PI1 79 aa15.71■□□□□ 0.11
VEGFA-231ENST00000640499 Q9BRP9 147 aa15.71■□□□□ 0.11
VEGFA-231ENST00000640499 ZNF73O43830 326 aaPredicted RBP15.69■□□□□ 0.1
VEGFA-231ENST00000640499 Q6ZRX8 168 aa15.69■□□□□ 0.1
VEGFA-231ENST00000640499 OR13C6PQ8NH95 151 aa15.69■□□□□ 0.1
VEGFA-231ENST00000640499 LINC00518Q8N0U6 118 aa15.68■□□□□ 0.1
VEGFA-231ENST00000640499 JOSD1Q15040 202 aaPredicted RBP15.66■□□□□ 0.1
VEGFA-231ENST00000640499 COX8AP10176 69 aa15.65■□□□□ 0.1
VEGFA-231ENST00000640499 TYMSOSQ8TAI1 123 aa15.65■□□□□ 0.1
VEGFA-231ENST00000640499 COPS9Q8WXC6 57 aa15.64■□□□□ 0.09
VEGFA-231ENST00000640499 TMA7Q9Y2S6 64 aaKnown RBP15.62■□□□□ 0.09
VEGFA-231ENST00000640499 C3orf22Q8N5N4 141 aa15.61■□□□□ 0.09
VEGFA-231ENST00000640499 DLEU1O43261 78 aa15.59■□□□□ 0.09
VEGFA-231ENST00000640499 PAM16Q9Y3D7 125 aa15.59■□□□□ 0.09
VEGFA-231ENST00000640499 ZNF706Q9Y5V0 76 aaPredicted RBP15.59■□□□□ 0.09
VEGFA-231ENST00000640499 LINC00483Q53H64 154 aa15.58■□□□□ 0.08
VEGFA-231ENST00000640499 C14orf144Q96I85 54 aa15.58■□□□□ 0.08
VEGFA-231ENST00000640499 CBY1Q9Y3M2 126 aa15.58■□□□□ 0.08
VEGFA-231ENST00000640499 UBR4Q5T4S7 5183 aa15.57■□□□□ 0.08
VEGFA-231ENST00000640499 SPATA45Q537H7 98 aa15.57■□□□□ 0.08
VEGFA-231ENST00000640499 C6orf99Q4VX62 202 aa15.56■□□□□ 0.08
VEGFA-231ENST00000640499 LRP2P98164 4655 aa15.55■□□□□ 0.08
VEGFA-231ENST00000640499 PYY3Q5JQD4 70 aa15.55■□□□□ 0.08
VEGFA-231ENST00000640499 A6NDN8 102 aa15.54■□□□□ 0.08
VEGFA-231ENST00000640499 A4D1N5 150 aa15.53■□□□□ 0.08
VEGFA-231ENST00000640499 GAGE2AQ6NT46 116 aa15.53■□□□□ 0.08
VEGFA-231ENST00000640499 VAMP8Q9BV40 100 aa15.53■□□□□ 0.08
VEGFA-231ENST00000640499 ELOF1P60002 83 aaKnown RBP15.52■□□□□ 0.08
VEGFA-231ENST00000640499 ST20-AS1Q8NBB2 130 aa15.52■□□□□ 0.08
VEGFA-231ENST00000640499 TSPAN13O95857 204 aa15.51■□□□□ 0.07
VEGFA-231ENST00000640499 HINT1P49773 126 aaPredicted RBP15.51■□□□□ 0.07
VEGFA-231ENST00000640499 COX7BP24311 80 aa15.49■□□□□ 0.07
VEGFA-231ENST00000640499 TRAV13-2A0A0B4J235 113 aa15.48■□□□□ 0.07
VEGFA-231ENST00000640499 C2orf91Q6ZV80 131 aa15.48■□□□□ 0.07
VEGFA-231ENST00000640499 LINC00304Q8N9R0 145 aa15.47■□□□□ 0.07
VEGFA-231ENST00000640499 SMIM11BQ8TCY0 68 aa15.47■□□□□ 0.07
VEGFA-231ENST00000640499 HIST1H4GQ99525 98 aa15.47■□□□□ 0.07
VEGFA-231ENST00000640499 LPAP08519 4548 aa15.46■□□□□ 0.07
VEGFA-231ENST00000640499 TRBV7-6A0A0J9YX20 115 aa15.45■□□□□ 0.06
VEGFA-231ENST00000640499 HIGD1BQ9P298 99 aa15.45■□□□□ 0.06
VEGFA-231ENST00000640499 SLC25A34Q6PIV7 304 aa15.44■□□□□ 0.06
VEGFA-231ENST00000640499 DHRS4-AS1Q9P1J3 65 aa15.44■□□□□ 0.06
VEGFA-231ENST00000640499 C12orf57Q99622 126 aa15.41■□□□□ 0.06
VEGFA-231ENST00000640499 A0A1B0GWB2 263 aa15.39■□□□□ 0.05
VEGFA-231ENST00000640499 Q8NBF4 154 aa15.39■□□□□ 0.05
VEGFA-231ENST00000640499 SPRR1BP22528 89 aa15.38■□□□□ 0.05
VEGFA-231ENST00000640499 IGLV9-49A0A0B4J1Y8 123 aa15.37■□□□□ 0.05
VEGFA-231ENST00000640499 MOBPQ13875 183 aa15.36■□□□□ 0.05
VEGFA-231ENST00000640499 CFC1BP0CG36 223 aa15.34■□□□□ 0.05
VEGFA-231ENST00000640499 CFC1P0CG37 223 aa15.34■□□□□ 0.05
VEGFA-231ENST00000640499 PRR4Q16378 134 aa15.32■□□□□ 0.04
VEGFA-231ENST00000640499 SSBP3-AS1Q7Z2R9 100 aa15.32■□□□□ 0.04
VEGFA-231ENST00000640499 LINC01547P58512 204 aaPredicted RBP15.31■□□□□ 0.04
VEGFA-231ENST00000640499 CTAG1AP78358 180 aa15.31■□□□□ 0.04
VEGFA-231ENST00000640499 SPAG11AQ6PDA7 123 aa15.31■□□□□ 0.04
VEGFA-231ENST00000640499 TAL2Q16559 108 aa15.29■□□□□ 0.04
VEGFA-231ENST00000640499 RETNLBQ9BQ08 111 aa15.29■□□□□ 0.04
VEGFA-231ENST00000640499 CEND1Q8N111 149 aa15.28■□□□□ 0.04
VEGFA-231ENST00000640499 DEFB105AQ8NG35 78 aa15.27■□□□□ 0.04
VEGFA-231ENST00000640499 IGLV5-48A0A075B6I7 105 aa15.26■□□□□ 0.03
VEGFA-231ENST00000640499 LINC00575Q6W349 94 aa15.26■□□□□ 0.03
VEGFA-231ENST00000640499 SMIM29Q86T20 159 aa15.26■□□□□ 0.03
VEGFA-231ENST00000640499 A0A0B4J2C4 111 aa15.24■□□□□ 0.03
VEGFA-231ENST00000640499 FXYD2P54710 66 aa15.24■□□□□ 0.03
VEGFA-231ENST00000640499 C9orf153Q5TBE3 101 aa15.24■□□□□ 0.03
VEGFA-231ENST00000640499 TEX49A0A1B0GTD5 131 aa15.23■□□□□ 0.03
VEGFA-231ENST00000640499 VAMP3Q15836 100 aa15.23■□□□□ 0.03
VEGFA-231ENST00000640499 C4orf48Q5BLP8 95 aa15.23■□□□□ 0.03
VEGFA-231ENST00000640499 H7C2G1 150 aa15.21■□□□□ 0.03
VEGFA-231ENST00000640499 SPINK1P00995 79 aa15.2■□□□□ 0.02
VEGFA-231ENST00000640499 Q1RN00 199 aa15.2■□□□□ 0.02
VEGFA-231ENST00000640499 Q8N377 158 aa15.2■□□□□ 0.02
VEGFA-231ENST00000640499 RAB37Q96AX2 223 aa15.2■□□□□ 0.02
VEGFA-231ENST00000640499 NHP2Q9NX24 153 aaKnown RBP15.19■□□□□ 0.02
VEGFA-231ENST00000640499 LAMTOR3Q9UHA4 124 aa15.19■□□□□ 0.02
VEGFA-231ENST00000640499 UQCR10Q9UDW1 63 aa15.17■□□□□ 0.02
VEGFA-231ENST00000640499 RNF213Q63HN8 5207 aa15.16■□□□□ 0.02
VEGFA-231ENST00000640499 hADV29S1A0JD25 119 aa15.16■□□□□ 0.02
VEGFA-231ENST00000640499 HSD52Q0P140 79 aa15.16■□□□□ 0.02
VEGFA-231ENST00000640499 SLC25A20O43772 301 aa15.15■□□□□ 0.02
VEGFA-231ENST00000640499 BVES-AS1Q5T3Y7 98 aa15.14■□□□□ 0.01
VEGFA-231ENST00000640499 PRO1854Q9UHT4 67 aa15.13■□□□□ 0.01
VEGFA-231ENST00000640499 RPS29P62273 56 aaKnown RBP15.12■□□□□ 0.01
VEGFA-231ENST00000640499 Q6ZQY7 126 aa15.12■□□□□ 0.01
VEGFA-231ENST00000640499 TMEM238LA0A1B0GVL6 79 aa15.11■□□□□ 0.01
VEGFA-231ENST00000640499 A6NJY4 79 aa15.11■□□□□ 0.01
VEGFA-231ENST00000640499 IGLV7-46A0A075B6I9 117 aa15.08■□□□□ 0
VEGFA-231ENST00000640499 FAM218AQ96MZ4 157 aa15.08■□□□□ 0
VEGFA-231ENST00000640499 A0A0G2JQZ4 141 aa15.07■□□□□ 0
VEGFA-231ENST00000640499 PRO1933Q9H354 126 aa15.06■□□□□ 0
VEGFA-231ENST00000640499 K7ERJ3 54 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms