RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 A0A087WVE0 104 aa7.35□□□□□ -1.23
SCN1B-208ENST00000640135 IGLV6-57P01721 117 aa7.35□□□□□ -1.23
SCN1B-208ENST00000640135 SPAG11AQ6PDA7 123 aa7.35□□□□□ -1.23
SCN1B-208ENST00000640135 LOC110117498A0A087WWA1 95 aa7.35□□□□□ -1.23
SCN1B-208ENST00000640135 KCNQ1DNQ9H478 68 aa7.34□□□□□ -1.23
SCN1B-208ENST00000640135 SPEGQ15772 3267 aa7.34□□□□□ -1.23
SCN1B-208ENST00000640135 A6NED7 52 aa7.34□□□□□ -1.23
SCN1B-208ENST00000640135 TLX1NBP0CAT3 122 aa7.34□□□□□ -1.23
SCN1B-208ENST00000640135 APLNQ9ULZ1 77 aa7.34□□□□□ -1.23
SCN1B-208ENST00000640135 FLNAP21333 2647 aaKnown RBP7.34□□□□□ -1.23
SCN1B-208ENST00000640135 IGLV1-50A0A075B6I6 118 aa7.33□□□□□ -1.24
SCN1B-208ENST00000640135 SSBP3-AS1Q7Z2R9 100 aa7.33□□□□□ -1.24
SCN1B-208ENST00000640135 ITPR3Q14573 2671 aa7.33□□□□□ -1.24
SCN1B-208ENST00000640135 EYSQ5T1H1 3165 aa7.33□□□□□ -1.24
SCN1B-208ENST00000640135 RETNLBQ9BQ08 111 aa7.33□□□□□ -1.24
SCN1B-208ENST00000640135 SMIM26A0A096LP01 95 aa7.33□□□□□ -1.24
SCN1B-208ENST00000640135 TRBV7-4A0A0J9YYF1 115 aa7.32□□□□□ -1.24
SCN1B-208ENST00000640135 C8orf87E5RJ46 101 aa7.32□□□□□ -1.24
SCN1B-208ENST00000640135 PCOTHQ58A44 107 aa7.32□□□□□ -1.24
SCN1B-208ENST00000640135 IGKV2D-30A0A075B6S6 120 aa7.32□□□□□ -1.24
SCN1B-208ENST00000640135 IGKV2-30P06310 120 aa7.32□□□□□ -1.24
SCN1B-208ENST00000640135 LINC00313P59037 77 aa7.32□□□□□ -1.24
SCN1B-208ENST00000640135 TMEM254Q8TBM7 123 aa7.32□□□□□ -1.24
SCN1B-208ENST00000640135 C1orf64Q8NEQ6 169 aa7.32□□□□□ -1.24
SCN1B-208ENST00000640135 PLA2G2DQ9UNK4 145 aa7.32□□□□□ -1.24
SCN1B-208ENST00000640135 ATRQ13535 2644 aa7.32□□□□□ -1.24
SCN1B-208ENST00000640135 H3BPC8 53 aa7.31□□□□□ -1.24
SCN1B-208ENST00000640135 C1orf195Q5TG92 126 aa7.31□□□□□ -1.24
SCN1B-208ENST00000640135 ZNF861PO60384 105 aa7.31□□□□□ -1.24
SCN1B-208ENST00000640135 C15orf56Q8N910 161 aa7.3□□□□□ -1.24
SCN1B-208ENST00000640135 Q6ZQT0 140 aa7.3□□□□□ -1.24
SCN1B-208ENST00000640135 ZNF575Q86XF7 245 aa7.3□□□□□ -1.24
SCN1B-208ENST00000640135 ATP11AUNQ6ZP68 121 aa7.29□□□□□ -1.24
SCN1B-208ENST00000640135 CENPEQ02224 2701 aa7.29□□□□□ -1.24
SCN1B-208ENST00000640135 CNBPP62633 177 aaKnown RBP7.29□□□□□ -1.24
SCN1B-208ENST00000640135 FAM218AQ96MZ4 157 aa7.29□□□□□ -1.24
SCN1B-208ENST00000640135 ST20-AS1Q8NBB2 130 aa7.28□□□□□ -1.24
SCN1B-208ENST00000640135 LITAFQ99732 161 aa7.28□□□□□ -1.24
SCN1B-208ENST00000640135 SERTAD4-AS1Q5TG53 156 aa7.27□□□□□ -1.24
SCN1B-208ENST00000640135 SPINK1P00995 79 aa7.26□□□□□ -1.25
SCN1B-208ENST00000640135 LINC01600Q96MT4 127 aa7.26□□□□□ -1.25
SCN1B-208ENST00000640135 IGSF10Q6WRI0 2623 aa7.26□□□□□ -1.25
SCN1B-208ENST00000640135 LINC00528Q8N1L1 170 aa7.26□□□□□ -1.25
SCN1B-208ENST00000640135 FAM168BA1KXE4 195 aa7.26□□□□□ -1.25
SCN1B-208ENST00000640135 WDFY4Q6ZS81 3184 aa7.25□□□□□ -1.25
SCN1B-208ENST00000640135 SMIM29Q86T20 159 aa7.25□□□□□ -1.25
SCN1B-208ENST00000640135 LINC00304Q8N9R0 145 aa7.25□□□□□ -1.25
SCN1B-208ENST00000640135 CELSR3Q9NYQ7 3312 aa7.25□□□□□ -1.25
SCN1B-208ENST00000640135 ACYP2P14621 99 aa7.24□□□□□ -1.25
SCN1B-208ENST00000640135 C7orf65Q6ZTY9 151 aa7.24□□□□□ -1.25
SCN1B-208ENST00000640135 CHD6Q8TD26 2715 aa7.24□□□□□ -1.25
SCN1B-208ENST00000640135 C4orf26Q17RF5 130 aa7.24□□□□□ -1.25
SCN1B-208ENST00000640135 FRYLO94915 3013 aa7.24□□□□□ -1.25
SCN1B-208ENST00000640135 UNC79Q9P2D8 2635 aa7.22□□□□□ -1.25
SCN1B-208ENST00000640135 TRAV22A0A0B4J277 110 aa7.22□□□□□ -1.25
SCN1B-208ENST00000640135 A8MWP4 228 aa7.22□□□□□ -1.25
SCN1B-208ENST00000640135 Q96NJ1 140 aa7.22□□□□□ -1.25
SCN1B-208ENST00000640135 DSPP15924 2871 aaKnown RBP7.21□□□□□ -1.25
SCN1B-208ENST00000640135 IGLV7-43P04211 117 aa7.21□□□□□ -1.26
SCN1B-208ENST00000640135 MYO15AQ9UKN7 3530 aa7.21□□□□□ -1.26
SCN1B-208ENST00000640135 TEP1Q99973 2627 aaKnown RBP7.21□□□□□ -1.26
SCN1B-208ENST00000640135 LOC101927531A0A1B0GV80 90 aa7.2□□□□□ -1.26
SCN1B-208ENST00000640135 C9orf129Q5T035 196 aaKnown RBP7.2□□□□□ -1.26
SCN1B-208ENST00000640135 MGAQ8IWI9 3026 aa7.18□□□□□ -1.26
SCN1B-208ENST00000640135 TNRC18O15417 2968 aaPredicted RBP7.18□□□□□ -1.26
SCN1B-208ENST00000640135 MRPL34Q9BQ48 92 aaKnown RBP7.18□□□□□ -1.26
SCN1B-208ENST00000640135 AKAP13Q12802 2813 aa7.18□□□□□ -1.26
SCN1B-208ENST00000640135 NBEAQ8NFP9 2946 aa7.17□□□□□ -1.26
SCN1B-208ENST00000640135 FRYQ5TBA9 3013 aa7.17□□□□□ -1.26
SCN1B-208ENST00000640135 PSORS1C2Q9UIG4 136 aa7.16□□□□□ -1.26
SCN1B-208ENST00000640135 IGLV5-37A0A075B6J1 123 aa7.16□□□□□ -1.26
SCN1B-208ENST00000640135 CASC10Q5T4H9 136 aa7.15□□□□□ -1.26
SCN1B-208ENST00000640135 SMR3BP02814 79 aaPredicted RBP7.15□□□□□ -1.26
SCN1B-208ENST00000640135 IGFL1Q6UW32 110 aa7.15□□□□□ -1.26
SCN1B-208ENST00000640135 USP34Q70CQ2 3546 aa7.13□□□□□ -1.27
SCN1B-208ENST00000640135 SPRR4Q96PI1 79 aa7.13□□□□□ -1.27
SCN1B-208ENST00000640135 A0A1W2PNN7 141 aa7.13□□□□□ -1.27
SCN1B-208ENST00000640135 COX6B2Q6YFQ2 88 aa7.12□□□□□ -1.27
SCN1B-208ENST00000640135 Q8N377 158 aa7.12□□□□□ -1.27
SCN1B-208ENST00000640135 COL6A3P12111 3177 aa7.12□□□□□ -1.27
SCN1B-208ENST00000640135 FREM2Q5SZK8 3169 aa7.12□□□□□ -1.27
SCN1B-208ENST00000640135 STAB1Q9NY15 2570 aa7.12□□□□□ -1.27
SCN1B-208ENST00000640135 A0A1B0GU69 56 aa7.12□□□□□ -1.27
SCN1B-208ENST00000640135 PRR15Q8IV56 129 aa7.11□□□□□ -1.27
SCN1B-208ENST00000640135 A0A1B0GVX0 72 aa7.1□□□□□ -1.27
SCN1B-208ENST00000640135 TNP2Q05952 138 aa7.1□□□□□ -1.27
SCN1B-208ENST00000640135 C8orf17Q9NRJ1 99 aa7.1□□□□□ -1.27
SCN1B-208ENST00000640135 ERC2-IT1O76042 136 aa7.09□□□□□ -1.27
SCN1B-208ENST00000640135 K7EQZ3 153 aa7.07□□□□□ -1.28
SCN1B-208ENST00000640135 PMAIP1Q13794 54 aa7.07□□□□□ -1.28
SCN1B-208ENST00000640135 EIF4EBP3O60516 100 aaPredicted RBP7.06□□□□□ -1.28
SCN1B-208ENST00000640135 CD164Q04900 197 aa7.06□□□□□ -1.28
SCN1B-208ENST00000640135 CR1P17927 2039 aa7.05□□□□□ -1.28
SCN1B-208ENST00000640135 PSPHP1O15172 72 aa7.04□□□□□ -1.28
SCN1B-208ENST00000640135 GCN1Q92616 2671 aaKnown RBP7.04□□□□□ -1.28
SCN1B-208ENST00000640135 DSCR10P59022 87 aa7.04□□□□□ -1.28
SCN1B-208ENST00000640135 OBSCN-AS1Q96MR7 158 aa7.04□□□□□ -1.28
SCN1B-208ENST00000640135 COL6A5A8TX70 2615 aa7.03□□□□□ -1.28
SCN1B-208ENST00000640135 BOD1L1Q8NFC6 3051 aa7.03□□□□□ -1.28
SCN1B-208ENST00000640135 RBM12B-AS1Q9P1G2 102 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms