RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091		M0R378	163 aa		6.67	□□□□□ -1.34
NECAP1-223	ENST00000640091	COX6C	P09669	75 aa		6.67	□□□□□ -1.34
NECAP1-223	ENST00000640091	NDUFV3	P56181	108 aa	Known RBP	6.67	□□□□□ -1.34
NECAP1-223	ENST00000640091	KRTAP10-2	P60368	255 aa		6.66	□□□□□ -1.34
NECAP1-223	ENST00000640091	DPH3	Q96FX2	82 aa		6.66	□□□□□ -1.34
NECAP1-223	ENST00000640091	LINC01600	Q96MT4	127 aa		6.66	□□□□□ -1.34
NECAP1-223	ENST00000640091	C22orf24	Q9Y442	160 aa		6.66	□□□□□ -1.34
NECAP1-223	ENST00000640091	FAT2	Q9NYQ8	4349 aa		6.66	□□□□□ -1.34
NECAP1-223	ENST00000640091	RPL37AP8	A6NKH3	93 aa		6.65	□□□□□ -1.34
NECAP1-223	ENST00000640091	C7orf33	Q8WU49	177 aa		6.65	□□□□□ -1.34
NECAP1-223	ENST00000640091	PLA2G2D	Q9UNK4	145 aa		6.65	□□□□□ -1.34
NECAP1-223	ENST00000640091	C6orf99	Q4VX62	202 aa		6.64	□□□□□ -1.35
NECAP1-223	ENST00000640091	SMIM20	Q8N5G0	67 aa		6.64	□□□□□ -1.35
NECAP1-223	ENST00000640091	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.64	□□□□□ -1.35
NECAP1-223	ENST00000640091	CCDC179	H3BU77	68 aa		6.64	□□□□□ -1.35
NECAP1-223	ENST00000640091	ANKRD29	Q8N6D5	301 aa		6.64	□□□□□ -1.35
NECAP1-223	ENST00000640091	FAM218A	Q96MZ4	157 aa		6.64	□□□□□ -1.35
NECAP1-223	ENST00000640091	LINC00167	Q96N53	147 aa		6.64	□□□□□ -1.35
NECAP1-223	ENST00000640091	TRAV23DV6	A0A075B6W5	121 aa		6.63	□□□□□ -1.35
NECAP1-223	ENST00000640091	MRPL55	Q7Z7F7	128 aa	Known RBP	6.63	□□□□□ -1.35
NECAP1-223	ENST00000640091	DNAH11	Q96DT5	4516 aa		6.62	□□□□□ -1.35
NECAP1-223	ENST00000640091	IGLV5-37	A0A075B6J1	123 aa		6.62	□□□□□ -1.35
NECAP1-223	ENST00000640091	ZNF73	O43830	326 aa	Predicted RBP	6.61	□□□□□ -1.35
NECAP1-223	ENST00000640091	ATXN8	Q156A1	80 aa		6.61	□□□□□ -1.35
NECAP1-223	ENST00000640091	IGLV1-50	A0A075B6I6	118 aa		6.61	□□□□□ -1.35
NECAP1-223	ENST00000640091		A0A087WYN8	130 aa		6.61	□□□□□ -1.35
NECAP1-223	ENST00000640091	SNCG	O76070	127 aa		6.61	□□□□□ -1.35
NECAP1-223	ENST00000640091	PHF5A	Q7RTV0	110 aa	Known RBP	6.61	□□□□□ -1.35
NECAP1-223	ENST00000640091	LINC00474	Q9P2X8	69 aa		6.61	□□□□□ -1.35
NECAP1-223	ENST00000640091	LST1	O00453	97 aa		6.6	□□□□□ -1.35
NECAP1-223	ENST00000640091	SPACA4	Q8TDM5	124 aa		6.6	□□□□□ -1.35
NECAP1-223	ENST00000640091	PKIG	Q9Y2B9	76 aa		6.6	□□□□□ -1.35
NECAP1-223	ENST00000640091	DNAH5	Q8TE73	4624 aa		6.6	□□□□□ -1.35
NECAP1-223	ENST00000640091	PKD1	P98161	4303 aa		6.6	□□□□□ -1.35
NECAP1-223	ENST00000640091		H0YGX0	51 aa		6.59	□□□□□ -1.35
NECAP1-223	ENST00000640091	SLC25A20	O43772	301 aa		6.59	□□□□□ -1.35
NECAP1-223	ENST00000640091	KCNQ1DN	Q9H478	68 aa		6.59	□□□□□ -1.35
NECAP1-223	ENST00000640091	RYR2	Q92736	4967 aa		6.59	□□□□□ -1.35
NECAP1-223	ENST00000640091		C9JAW5	83 aa		6.59	□□□□□ -1.35
NECAP1-223	ENST00000640091	DIRC1	Q969H9	104 aa		6.59	□□□□□ -1.35
NECAP1-223	ENST00000640091	KRTAP11-1	Q8IUC1	163 aa		6.58	□□□□□ -1.36
NECAP1-223	ENST00000640091	FAM30A	Q9NZY2	134 aa		6.57	□□□□□ -1.36
NECAP1-223	ENST00000640091	COX7B	P24311	80 aa		6.56	□□□□□ -1.36
NECAP1-223	ENST00000640091	KRTAP10-1	P60331	282 aa		6.56	□□□□□ -1.36
NECAP1-223	ENST00000640091	UBE2B	P63146	152 aa		6.56	□□□□□ -1.36
NECAP1-223	ENST00000640091	FAM240A	A0A1B0GVK7	77 aa		6.55	□□□□□ -1.36
NECAP1-223	ENST00000640091	ELOF1	P60002	83 aa	Known RBP	6.55	□□□□□ -1.36
NECAP1-223	ENST00000640091	LINC00575	Q6W349	94 aa		6.55	□□□□□ -1.36
NECAP1-223	ENST00000640091	TRAC	P01848	142 aa		6.55	□□□□□ -1.36
NECAP1-223	ENST00000640091	REG3G	Q6UW15	175 aa		6.55	□□□□□ -1.36
NECAP1-223	ENST00000640091	LINC00336	Q6ZUF6	198 aa		6.55	□□□□□ -1.36
NECAP1-223	ENST00000640091	TRBV7-7	A0A0K0K1E9	115 aa		6.54	□□□□□ -1.36
NECAP1-223	ENST00000640091	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.54	□□□□□ -1.36
NECAP1-223	ENST00000640091	PRY	O14603	147 aa		6.54	□□□□□ -1.36
NECAP1-223	ENST00000640091	HAMP	P81172	84 aa		6.54	□□□□□ -1.36
NECAP1-223	ENST00000640091	hADV29S1	A0JD25	119 aa		6.53	□□□□□ -1.36
NECAP1-223	ENST00000640091	DNAL4	O96015	105 aa		6.53	□□□□□ -1.36
NECAP1-223	ENST00000640091	SPRR1A	P35321	89 aa		6.53	□□□□□ -1.36
NECAP1-223	ENST00000640091	PKHD1	P08F94	4074 aa		6.53	□□□□□ -1.36
NECAP1-223	ENST00000640091	DNAH8	Q96JB1	4490 aa		6.53	□□□□□ -1.36
NECAP1-223	ENST00000640091	TRBV7-6	A0A0J9YX20	115 aa		6.53	□□□□□ -1.36
NECAP1-223	ENST00000640091	ETDC	A0A1B0GVM5	59 aa		6.53	□□□□□ -1.36
NECAP1-223	ENST00000640091	LINC00528	Q8N1L1	170 aa		6.53	□□□□□ -1.36
NECAP1-223	ENST00000640091	PLAC8	Q9NZF1	115 aa		6.53	□□□□□ -1.36
NECAP1-223	ENST00000640091	RYR3	Q15413	4870 aa		6.52	□□□□□ -1.36
NECAP1-223	ENST00000640091	EPM2A	B3EWF7	344 aa		6.52	□□□□□ -1.37
NECAP1-223	ENST00000640091	BAALC-AS2	P0C853	105 aa		6.52	□□□□□ -1.37
NECAP1-223	ENST00000640091	TEX49	A0A1B0GTD5	131 aa		6.52	□□□□□ -1.37
NECAP1-223	ENST00000640091	CIRBP-AS1	Q8TBR5	109 aa		6.52	□□□□□ -1.37
NECAP1-223	ENST00000640091		Q6ZRX8	168 aa		6.51	□□□□□ -1.37
NECAP1-223	ENST00000640091		Q9BRP9	147 aa		6.51	□□□□□ -1.37
NECAP1-223	ENST00000640091		A0A1B0GVY2	172 aa		6.5	□□□□□ -1.37
NECAP1-223	ENST00000640091	PRLH	P81277	87 aa		6.5	□□□□□ -1.37
NECAP1-223	ENST00000640091		Q6ZQY7	126 aa		6.5	□□□□□ -1.37
NECAP1-223	ENST00000640091	FAM19A1	Q7Z5A9	133 aa		6.5	□□□□□ -1.37
NECAP1-223	ENST00000640091		A0A1B0GX51	115 aa		6.5	□□□□□ -1.37
NECAP1-223	ENST00000640091	IMUP	Q9GZP8	106 aa		6.5	□□□□□ -1.37
NECAP1-223	ENST00000640091		H3BT86	120 aa		6.49	□□□□□ -1.37
NECAP1-223	ENST00000640091	SCX	Q7RTU7	201 aa		6.49	□□□□□ -1.37
NECAP1-223	ENST00000640091		Q6ZSA8	131 aa		6.49	□□□□□ -1.37
NECAP1-223	ENST00000640091	ORMDL1	Q9P0S3	153 aa		6.49	□□□□□ -1.37
NECAP1-223	ENST00000640091	ERC2-IT1	O76042	136 aa		6.48	□□□□□ -1.37
NECAP1-223	ENST00000640091	C5orf47	Q569G3	176 aa		6.48	□□□□□ -1.37
NECAP1-223	ENST00000640091	INAFM2	P0DMQ5	153 aa		6.47	□□□□□ -1.37
NECAP1-223	ENST00000640091	DEFB105A	Q8NG35	78 aa		6.47	□□□□□ -1.37
NECAP1-223	ENST00000640091	SMCR5	Q8TEV8	140 aa		6.47	□□□□□ -1.37
NECAP1-223	ENST00000640091	HIGD2A	Q9BW72	106 aa		6.47	□□□□□ -1.37
NECAP1-223	ENST00000640091	PSORS1C2	Q9UIG4	136 aa		6.47	□□□□□ -1.37
NECAP1-223	ENST00000640091	SRRM2	Q9UQ35	2752 aa	Known RBP	6.47	□□□□□ -1.37
NECAP1-223	ENST00000640091	LRP1B	Q9NZR2	4599 aa		6.47	□□□□□ -1.37
NECAP1-223	ENST00000640091	ST20-AS1	Q8NBB2	130 aa		6.46	□□□□□ -1.37
NECAP1-223	ENST00000640091	DHRS4-AS1	Q9P1J3	65 aa		6.46	□□□□□ -1.37
NECAP1-223	ENST00000640091	BCE1	O60756	84 aa		6.45	□□□□□ -1.38
NECAP1-223	ENST00000640091	UBE2A	P49459	152 aa		6.45	□□□□□ -1.38
NECAP1-223	ENST00000640091	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	6.45	□□□□□ -1.38
NECAP1-223	ENST00000640091	TMEM256-PLSCR3	K7ERE1	68 aa		6.44	□□□□□ -1.38
NECAP1-223	ENST00000640091	UQCRQ	O14949	82 aa		6.44	□□□□□ -1.38
NECAP1-223	ENST00000640091	C1orf137	Q5JT78	98 aa		6.44	□□□□□ -1.38
NECAP1-223	ENST00000640091	C3orf22	Q8N5N4	141 aa		6.44	□□□□□ -1.38
NECAP1-223	ENST00000640091	RPS28	P62857	69 aa	Known RBP	6.44	□□□□□ -1.38

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms