RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TXNDC17Q9BRA2 123 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 NPVFQ9HCQ7 196 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 A0A096LPF7 62 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 HRES1P13985 223 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 COX7CP15954 63 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 Q0VG73 95 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 CYP2G1PQ6ZSU1 146 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 Q8TAT8 98 aa4.18□□□□□ -1.74
NECAP1-220ENST00000639841 VPS13BQ7Z7G8 4022 aa4.17□□□□□ -1.74
NECAP1-220ENST00000639841 A0A0J9YY99 117 aa4.17□□□□□ -1.74
NECAP1-220ENST00000639841 ADCYAP1P18509 176 aa4.17□□□□□ -1.74
NECAP1-220ENST00000639841 APOBP04114 4563 aaKnown RBP4.17□□□□□ -1.74
NECAP1-220ENST00000639841 MUC21A0A140T8X8 626 aa4.16□□□□□ -1.74
NECAP1-220ENST00000639841 DEFB1P60022 68 aa4.16□□□□□ -1.74
NECAP1-220ENST00000639841 KRTAP10-1P60331 282 aa4.16□□□□□ -1.74
NECAP1-220ENST00000639841 MIR22HGQ0VDD5 57 aa4.16□□□□□ -1.74
NECAP1-220ENST00000639841 CASC2Q6XLA1 102 aa4.16□□□□□ -1.74
NECAP1-220ENST00000639841 SMIM4Q8WVI0 70 aa4.16□□□□□ -1.74
NECAP1-220ENST00000639841 NDUFA12Q9UI09 145 aa4.16□□□□□ -1.74
NECAP1-220ENST00000639841 HTN1P15515 57 aa4.16□□□□□ -1.74
NECAP1-220ENST00000639841 S100A7L2Q5SY68 101 aa4.16□□□□□ -1.74
NECAP1-220ENST00000639841 DNAH5Q8TE73 4624 aa4.16□□□□□ -1.74
NECAP1-220ENST00000639841 SPINK4O60575 86 aa4.15□□□□□ -1.74
NECAP1-220ENST00000639841 RBM3P98179 157 aaKnown RBP4.15□□□□□ -1.74
NECAP1-220ENST00000639841 PDE6HQ13956 83 aa4.14□□□□□ -1.75
NECAP1-220ENST00000639841 LYPD5Q6UWN5 251 aa4.14□□□□□ -1.75
NECAP1-220ENST00000639841 C5orf38Q86SI9 138 aa4.14□□□□□ -1.75
NECAP1-220ENST00000639841 TMEM254Q8TBM7 123 aa4.14□□□□□ -1.75
NECAP1-220ENST00000639841 Q9BRP9 147 aa4.14□□□□□ -1.75
NECAP1-220ENST00000639841 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
NECAP1-220ENST00000639841 PSORS1C2Q9UIG4 136 aa4.14□□□□□ -1.75
NECAP1-220ENST00000639841 TRGV1A0A0A0MS02 117 aa4.14□□□□□ -1.75
NECAP1-220ENST00000639841 PRB4P10163 310 aaPredicted RBP4.14□□□□□ -1.75
NECAP1-220ENST00000639841 LINC01556Q5JQF7 62 aa4.14□□□□□ -1.75
NECAP1-220ENST00000639841 Q6ZTI0 123 aa4.14□□□□□ -1.75
NECAP1-220ENST00000639841 TP53TG3Q9ULZ0 132 aa4.14□□□□□ -1.75
NECAP1-220ENST00000639841 TRGV4A0A0C4DH28 118 aa4.13□□□□□ -1.75
NECAP1-220ENST00000639841 G3V3Q6 166 aa4.13□□□□□ -1.75
NECAP1-220ENST00000639841 IAPPP10997 89 aa4.13□□□□□ -1.75
NECAP1-220ENST00000639841 KRTAP26-1Q6PEX3 210 aa4.13□□□□□ -1.75
NECAP1-220ENST00000639841 Q6ZSA8 131 aa4.13□□□□□ -1.75
NECAP1-220ENST00000639841 LENEPQ9Y5L5 61 aa4.13□□□□□ -1.75
NECAP1-220ENST00000639841 TRAV12-1A0A0B4J245 112 aa4.12□□□□□ -1.75
NECAP1-220ENST00000639841 TRAV12-3A0A0B4J271 114 aa4.12□□□□□ -1.75
NECAP1-220ENST00000639841 UBE2L5PA0A1B0GUS4 154 aa4.12□□□□□ -1.75
NECAP1-220ENST00000639841 ERC2-IT1O76042 136 aa4.12□□□□□ -1.75
NECAP1-220ENST00000639841 SMR3BP02814 79 aaPredicted RBP4.12□□□□□ -1.75
NECAP1-220ENST00000639841 HINT1P49773 126 aaPredicted RBP4.12□□□□□ -1.75
NECAP1-220ENST00000639841 UBE2L3P68036 154 aaKnown RBP4.12□□□□□ -1.75
NECAP1-220ENST00000639841 FAM74A1Q5RGS3 127 aa4.12□□□□□ -1.75
NECAP1-220ENST00000639841 SPANXN1Q5VSR9 72 aa4.12□□□□□ -1.75
NECAP1-220ENST00000639841 C10orf113Q5VZT2 155 aa4.12□□□□□ -1.75
NECAP1-220ENST00000639841 Q8N9L7 120 aa4.12□□□□□ -1.75
NECAP1-220ENST00000639841 ZNF431Q8TF32 576 aaPredicted RBP4.12□□□□□ -1.75
NECAP1-220ENST00000639841 PSENENQ9NZ42 101 aa4.12□□□□□ -1.75
NECAP1-220ENST00000639841 TMEM14CQ9P0S9 112 aa4.12□□□□□ -1.75
NECAP1-220ENST00000639841 HERC1Q15751 4861 aa4.11□□□□□ -1.75
NECAP1-220ENST00000639841 H3BQ15 152 aa4.11□□□□□ -1.75
NECAP1-220ENST00000639841 SSSCA1O60232 199 aa4.11□□□□□ -1.75
NECAP1-220ENST00000639841 IGLC2P0DOY2 106 aa4.11□□□□□ -1.75
NECAP1-220ENST00000639841 MOBPQ13875 183 aa4.11□□□□□ -1.75
NECAP1-220ENST00000639841 LRCOL1A6NCL2 159 aa4.11□□□□□ -1.75
NECAP1-220ENST00000639841 SFT2D2O95562 160 aa4.11□□□□□ -1.75
NECAP1-220ENST00000639841 IQCJQ1A5X6 159 aa4.11□□□□□ -1.75
NECAP1-220ENST00000639841 TMEM141Q96I45 108 aa4.11□□□□□ -1.75
NECAP1-220ENST00000639841 UBE2G1P62253 170 aa4.1□□□□□ -1.75
NECAP1-220ENST00000639841 PRR34Q9NV39 138 aa4.1□□□□□ -1.75
NECAP1-220ENST00000639841 FLG2Q5D862 2391 aaPredicted RBP4.1□□□□□ -1.75
NECAP1-220ENST00000639841 SRRM2Q9UQ35 2752 aaKnown RBP4.1□□□□□ -1.75
NECAP1-220ENST00000639841 ELOBQ15370 118 aa4.09□□□□□ -1.75
NECAP1-220ENST00000639841 A0A087WWC5 75 aa4.09□□□□□ -1.76
NECAP1-220ENST00000639841 NAP1L6A6NFF2 107 aa4.09□□□□□ -1.76
NECAP1-220ENST00000639841 RHOHQ15669 191 aa4.09□□□□□ -1.76
NECAP1-220ENST00000639841 PYDC2Q56P42 97 aa4.09□□□□□ -1.76
NECAP1-220ENST00000639841 LELP1Q5T871 98 aa4.09□□□□□ -1.76
NECAP1-220ENST00000639841 WFDC10BQ8IUB3 73 aa4.09□□□□□ -1.76
NECAP1-220ENST00000639841 KRTAP1-4P0C5Y4 121 aa4.08□□□□□ -1.76
NECAP1-220ENST00000639841 KRTAP11-1Q8IUC1 163 aa4.08□□□□□ -1.76
NECAP1-220ENST00000639841 TOMM5Q8N4H5 51 aa4.08□□□□□ -1.76
NECAP1-220ENST00000639841 LINC00474Q9P2X8 69 aa4.08□□□□□ -1.76
NECAP1-220ENST00000639841 TRBV6-4A0A1B0GX49 114 aa4.07□□□□□ -1.76
NECAP1-220ENST00000639841 CCKP06307 115 aa4.07□□□□□ -1.76
NECAP1-220ENST00000639841 hADV29S1A0JD25 119 aa4.07□□□□□ -1.76
NECAP1-220ENST00000639841 ATP5EP56381 51 aaPredicted RBP4.06□□□□□ -1.76
NECAP1-220ENST00000639841 Q1T7F1 81 aa4.05□□□□□ -1.76
NECAP1-220ENST00000639841 MGST2Q99735 147 aa4.05□□□□□ -1.76
NECAP1-220ENST00000639841 TRAV21A0A0B4J279 112 aa4.05□□□□□ -1.76
NECAP1-220ENST00000639841 K7EP34 96 aa4.05□□□□□ -1.76
NECAP1-220ENST00000639841 RPL37AP61513 92 aaKnown RBP4.05□□□□□ -1.76
NECAP1-220ENST00000639841 MYCBP2O75592 4640 aa4.04□□□□□ -1.76
NECAP1-220ENST00000639841 C9orf116Q5BN46 136 aaPredicted RBP4.04□□□□□ -1.76
NECAP1-220ENST00000639841 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.04□□□□□ -1.76
NECAP1-220ENST00000639841 PMCHL2Q9BQD1 86 aa4.04□□□□□ -1.76
NECAP1-220ENST00000639841 MT3P25713 68 aa4.03□□□□□ -1.76
NECAP1-220ENST00000639841 ANAPC11Q9NYG5 84 aa4.03□□□□□ -1.76
NECAP1-220ENST00000639841 M0R3E3 92 aa4.03□□□□□ -1.76
NECAP1-220ENST00000639841 NUPR1O60356 82 aa4.03□□□□□ -1.76
NECAP1-220ENST00000639841 PEA15Q15121 130 aa4.03□□□□□ -1.76
NECAP1-220ENST00000639841 TPRXLQ17RH7 258 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms