RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 LOC400499M0QZD8 3231 aa3.5□□□□□ -1.85
POLR2B-213ENST00000639658 ANK3Q12955 4377 aaKnown RBP3.49□□□□□ -1.85
POLR2B-213ENST00000639658 A0A087WSZ3 146 aa3.49□□□□□ -1.85
POLR2B-213ENST00000639658 VPS13CQ709C8 3753 aa3.49□□□□□ -1.85
POLR2B-213ENST00000639658 IGLV10-54A0A075B6I4 117 aa3.49□□□□□ -1.85
POLR2B-213ENST00000639658 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
POLR2B-213ENST00000639658 KRTAP13-3Q3SY46 172 aa3.49□□□□□ -1.85
POLR2B-213ENST00000639658 C1orf134Q5TEV5 83 aa3.49□□□□□ -1.85
POLR2B-213ENST00000639658 CSAG1Q6PB30 78 aa3.49□□□□□ -1.85
POLR2B-213ENST00000639658 WFDC13Q8IUB5 93 aa3.48□□□□□ -1.85
POLR2B-213ENST00000639658 PRB1P04280 392 aa3.47□□□□□ -1.85
POLR2B-213ENST00000639658 RPL37AP61513 92 aaKnown RBP3.47□□□□□ -1.85
POLR2B-213ENST00000639658 BOD1L1Q8NFC6 3051 aa3.47□□□□□ -1.85
POLR2B-213ENST00000639658 ANKHD1Q8IWZ3 2542 aaKnown RBP3.47□□□□□ -1.85
POLR2B-213ENST00000639658 ADGRG4Q8IZF6 3080 aa3.47□□□□□ -1.85
POLR2B-213ENST00000639658 ZNF861PO60384 105 aa3.47□□□□□ -1.85
POLR2B-213ENST00000639658 CEP250Q9BV73 2442 aa3.46□□□□□ -1.85
POLR2B-213ENST00000639658 KRTAP7-1Q8IUC3 87 aa3.46□□□□□ -1.86
POLR2B-213ENST00000639658 CCL19Q99731 98 aa3.46□□□□□ -1.86
POLR2B-213ENST00000639658 A0A096LPF7 62 aa3.46□□□□□ -1.86
POLR2B-213ENST00000639658 REG3GQ6UW15 175 aa3.46□□□□□ -1.86
POLR2B-213ENST00000639658 WNK1Q9H4A3 2382 aa3.46□□□□□ -1.86
POLR2B-213ENST00000639658 RELNP78509 3460 aa3.46□□□□□ -1.86
POLR2B-213ENST00000639658 KRTAP25-1Q3LHN0 102 aa3.45□□□□□ -1.86
POLR2B-213ENST00000639658 WFDC10BQ8IUB3 73 aa3.45□□□□□ -1.86
POLR2B-213ENST00000639658 DMAC1Q96GE9 116 aa3.45□□□□□ -1.86
POLR2B-213ENST00000639658 DEFB105AQ8NG35 78 aa3.45□□□□□ -1.86
POLR2B-213ENST00000639658 Q96NJ1 140 aa3.45□□□□□ -1.86
POLR2B-213ENST00000639658 APC2O95996 2303 aa3.45□□□□□ -1.86
POLR2B-213ENST00000639658 ROS1P08922 2347 aa3.44□□□□□ -1.86
POLR2B-213ENST00000639658 UQCR11O14957 56 aa3.44□□□□□ -1.86
POLR2B-213ENST00000639658 DEFB130BP0DP73 79 aa3.44□□□□□ -1.86
POLR2B-213ENST00000639658 DEFB130AP0DP74 79 aa3.44□□□□□ -1.86
POLR2B-213ENST00000639658 MAP1BP46821 2468 aaKnown RBP3.44□□□□□ -1.86
POLR2B-213ENST00000639658 ACYP2P14621 99 aa3.44□□□□□ -1.86
POLR2B-213ENST00000639658 DMXL1Q9Y485 3027 aa3.44□□□□□ -1.86
POLR2B-213ENST00000639658 KMT2BQ9UMN6 2715 aaPredicted RBP3.44□□□□□ -1.86
POLR2B-213ENST00000639658 CNOT1A5YKK6 2376 aaKnown RBP3.43□□□□□ -1.86
POLR2B-213ENST00000639658 MIR22HGQ0VDD5 57 aa3.43□□□□□ -1.86
POLR2B-213ENST00000639658 LRBAP50851 2863 aa3.43□□□□□ -1.86
POLR2B-213ENST00000639658 LINC01556Q5JQF7 62 aa3.43□□□□□ -1.86
POLR2B-213ENST00000639658 DNAJC9-AS1A6NH13 148 aa3.42□□□□□ -1.86
POLR2B-213ENST00000639658 CELSR2Q9HCU4 2923 aa3.42□□□□□ -1.86
POLR2B-213ENST00000639658 PCNX1Q96RV3 2341 aa3.42□□□□□ -1.86
POLR2B-213ENST00000639658 C8orf17Q9NRJ1 99 aa3.42□□□□□ -1.86
POLR2B-213ENST00000639658 PRRC2CQ9Y520 2896 aaKnown RBP3.42□□□□□ -1.86
POLR2B-213ENST00000639658 CHD6Q8TD26 2715 aa3.41□□□□□ -1.86
POLR2B-213ENST00000639658 SVEP1Q4LDE5 3571 aa3.41□□□□□ -1.86
POLR2B-213ENST00000639658 FAM168BA1KXE4 195 aa3.41□□□□□ -1.86
POLR2B-213ENST00000639658 DEFB116Q30KQ4 102 aa3.41□□□□□ -1.86
POLR2B-213ENST00000639658 PRB2P02812 416 aaPredicted RBP3.41□□□□□ -1.86
POLR2B-213ENST00000639658 SORL1Q92673 2214 aa3.4□□□□□ -1.86
POLR2B-213ENST00000639658 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.4□□□□□ -1.871e-9■■■□□ 16.6
POLR2B-213ENST00000639658 MAP1AP78559 2803 aaPredicted RBP3.39□□□□□ -1.87
POLR2B-213ENST00000639658 INAFM1C9JVW0 142 aa3.39□□□□□ -1.87
POLR2B-213ENST00000639658 P0C880 135 aa3.39□□□□□ -1.87
POLR2B-213ENST00000639658 A0A1B0GU69 56 aa3.39□□□□□ -1.87
POLR2B-213ENST00000639658 LAMA5O15230 3695 aa3.39□□□□□ -1.87
POLR2B-213ENST00000639658 SPART-AS1P0CW21 52 aa3.39□□□□□ -1.87
POLR2B-213ENST00000639658 MRPL34Q9BQ48 92 aaKnown RBP3.39□□□□□ -1.87
POLR2B-213ENST00000639658 A0A1B0GVX0 72 aa3.39□□□□□ -1.87
POLR2B-213ENST00000639658 LINC00483Q53H64 154 aa3.39□□□□□ -1.87
POLR2B-213ENST00000639658 COL6A6A6NMZ7 2263 aa3.38□□□□□ -1.87
POLR2B-213ENST00000639658 TRIOBPQ9H2D6 2365 aa3.38□□□□□ -1.87
POLR2B-213ENST00000639658 DNAH10OSP0CZ25 163 aa3.38□□□□□ -1.87
POLR2B-213ENST00000639658 PIEZO1Q92508 2521 aa3.38□□□□□ -1.87
POLR2B-213ENST00000639658 PCOTHQ58A44 107 aa3.37□□□□□ -1.87
POLR2B-213ENST00000639658 UNC79Q9P2D8 2635 aa3.37□□□□□ -1.87
POLR2B-213ENST00000639658 ATMQ13315 3056 aa3.37□□□□□ -1.87
POLR2B-213ENST00000639658 IGLV5-52A0A0A0MRZ9 124 aa3.37□□□□□ -1.87
POLR2B-213ENST00000639658 A8MUU9 505 aa3.37□□□□□ -1.87
POLR2B-213ENST00000639658 BAHCC1Q9P281 2608 aa3.37□□□□□ -1.87
POLR2B-213ENST00000639658 IGLV7-43P04211 117 aa3.36□□□□□ -1.87
POLR2B-213ENST00000639658 KRTAP13-1Q8IUC0 172 aa3.36□□□□□ -1.87
POLR2B-213ENST00000639658 NCOR1O75376 2440 aa3.35□□□□□ -1.87
POLR2B-213ENST00000639658 ANAPC11Q9NYG5 84 aa3.35□□□□□ -1.87
POLR2B-213ENST00000639658 KRTAP16-1A8MUX0 517 aa3.34□□□□□ -1.87
POLR2B-213ENST00000639658 TENM2Q9NT68 2774 aa3.34□□□□□ -1.87
POLR2B-213ENST00000639658 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.33□□□□□ -1.88
POLR2B-213ENST00000639658 ASH1LQ9NR48 2969 aaKnown RBP3.33□□□□□ -1.88
POLR2B-213ENST00000639658 TPRP12270 2363 aaKnown RBP3.33□□□□□ -1.88
POLR2B-213ENST00000639658 RP1L1Q8IWN7 2480 aaPredicted RBP3.32□□□□□ -1.88
POLR2B-213ENST00000639658 DEFB123Q8N688 67 aa3.32□□□□□ -1.88
POLR2B-213ENST00000639658 CHTF8P0CG12 524 aa3.32□□□□□ -1.88
POLR2B-213ENST00000639658 COL12A1Q99715 3063 aa3.32□□□□□ -1.88
POLR2B-213ENST00000639658 ANKRD11Q6UB99 2663 aaPredicted RBP3.31□□□□□ -1.88
POLR2B-213ENST00000639658 NUPR2A6NF83 97 aa3.31□□□□□ -1.88
POLR2B-213ENST00000639658 ZDBF2Q9HCK1 2354 aa3.31□□□□□ -1.88
POLR2B-213ENST00000639658 OTOGLQ3ZCN5 2332 aa3.31□□□□□ -1.88
POLR2B-213ENST00000639658 A0A0G2JQZ4 141 aa3.31□□□□□ -1.88
POLR2B-213ENST00000639658 A0A1W2PNN7 141 aa3.31□□□□□ -1.88
POLR2B-213ENST00000639658 IGKV2-30P06310 120 aa3.3□□□□□ -1.88
POLR2B-213ENST00000639658 C20orf166-AS1Q96NR2 134 aa3.3□□□□□ -1.88
POLR2B-213ENST00000639658 PTPRZ1P23471 2315 aaPredicted RBP3.3□□□□□ -1.88
POLR2B-213ENST00000639658 CDK2AP2O75956 126 aa3.3□□□□□ -1.88
POLR2B-213ENST00000639658 LY6G6CO95867 125 aa3.3□□□□□ -1.88
POLR2B-213ENST00000639658 Q5W150 140 aa3.3□□□□□ -1.88
POLR2B-213ENST00000639658 KRTAP1-3Q8IUG1 177 aa3.3□□□□□ -1.88
POLR2B-213ENST00000639658 CACNA1HO95180 2353 aa3.3□□□□□ -1.88
POLR2B-213ENST00000639658 VPS13DQ5THJ4 4388 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms