RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 A0A1B0GU69 56 aa2.85□□□□□ -1.95
SCN3A-209ENST00000639244 A6NDX4 124 aa2.85□□□□□ -1.95
SCN3A-209ENST00000639244 Q8N9W7 124 aa2.85□□□□□ -1.95
SCN3A-209ENST00000639244 XIRP2A4UGR9 3374 aa2.85□□□□□ -1.95
SCN3A-209ENST00000639244 A0A096LNI7 61 aa2.85□□□□□ -1.95
SCN3A-209ENST00000639244 DEFB113Q30KQ7 82 aa2.85□□□□□ -1.95
SCN3A-209ENST00000639244 COL6A5A8TX70 2615 aa2.85□□□□□ -1.95
SCN3A-209ENST00000639244 C9orf129Q5T035 196 aaKnown RBP2.85□□□□□ -1.95
SCN3A-209ENST00000639244 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.85□□□□□ -1.95
SCN3A-209ENST00000639244 LAMA2P24043 3122 aaKnown RBP2.85□□□□□ -1.95
SCN3A-209ENST00000639244 SPINT4Q6UDR6 99 aa2.85□□□□□ -1.95
SCN3A-209ENST00000639244 CDKN2A-AS1Q9UH64 79 aa2.85□□□□□ -1.95
SCN3A-209ENST00000639244 STAB2Q8WWQ8 2551 aa2.85□□□□□ -1.95
SCN3A-209ENST00000639244 SPINK7P58062 85 aa2.85□□□□□ -1.95
SCN3A-209ENST00000639244 Q6ZR54 194 aa2.85□□□□□ -1.95
SCN3A-209ENST00000639244 IGLV1-47P01700 117 aa2.84□□□□□ -1.95
SCN3A-209ENST00000639244 RNF5Q99942 180 aa2.84□□□□□ -1.95
SCN3A-209ENST00000639244 MGAM2Q2M2H8 2515 aa2.84□□□□□ -1.95
SCN3A-209ENST00000639244 NSD1Q96L73 2696 aaPredicted RBP2.84□□□□□ -1.95
SCN3A-209ENST00000639244 CCL18P55774 89 aa2.84□□□□□ -1.95
SCN3A-209ENST00000639244 HTTP42858 3142 aa2.84□□□□□ -1.95
SCN3A-209ENST00000639244 A0A1W2PNM2 257 aa2.84□□□□□ -1.95
SCN3A-209ENST00000639244 DNAJC9-AS1A6NH13 148 aa2.84□□□□□ -1.95
SCN3A-209ENST00000639244 PRUNE2Q8WUY3 3088 aa2.84□□□□□ -1.95
SCN3A-209ENST00000639244 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
SCN3A-209ENST00000639244 C10orf25Q5T742 122 aa2.84□□□□□ -1.95
SCN3A-209ENST00000639244 Q8N9L7 120 aa2.84□□□□□ -1.96
SCN3A-209ENST00000639244 CEP350Q5VT06 3117 aa2.84□□□□□ -1.96
SCN3A-209ENST00000639244 IGLV4-60A0A075B6I1 120 aa2.84□□□□□ -1.96
SCN3A-209ENST00000639244 Q6ZQY7 126 aa2.84□□□□□ -1.96
SCN3A-209ENST00000639244 CNBPP62633 177 aaKnown RBP2.83□□□□□ -1.96
SCN3A-209ENST00000639244 ODF3L2Q3SX64 289 aa2.83□□□□□ -1.96
SCN3A-209ENST00000639244 DEFB135Q30KP9 77 aa2.83□□□□□ -1.96
SCN3A-209ENST00000639244 K7EIM0 57 aa2.83□□□□□ -1.96
SCN3A-209ENST00000639244 ZFP36P26651 326 aaKnown RBP2.83□□□□□ -1.96
SCN3A-209ENST00000639244 TLX1NBP0CAT3 122 aa2.83□□□□□ -1.96
SCN3A-209ENST00000639244 EGFEM1PQ0D2K5 195 aa2.83□□□□□ -1.96
SCN3A-209ENST00000639244 I3L2K1 104 aa2.82□□□□□ -1.96
SCN3A-209ENST00000639244 A0A087WSZ3 146 aa2.82□□□□□ -1.96
SCN3A-209ENST00000639244 KALRNO60229 2985 aa2.82□□□□□ -1.96
SCN3A-209ENST00000639244 NUPR2A6NF83 97 aa2.82□□□□□ -1.96
SCN3A-209ENST00000639244 IGLV1-44P01699 117 aa2.82□□□□□ -1.96
SCN3A-209ENST00000639244 DNAH10OSP0CZ25 163 aa2.82□□□□□ -1.96
SCN3A-209ENST00000639244 IGKV2-24A0A0C4DH68 120 aa2.82□□□□□ -1.96
SCN3A-209ENST00000639244 SMIM1B2RUZ4 78 aa2.82□□□□□ -1.96
SCN3A-209ENST00000639244 ASH1LQ9NR48 2969 aaKnown RBP2.82□□□□□ -1.96
SCN3A-209ENST00000639244 KRTAP25-1Q3LHN0 102 aa2.82□□□□□ -1.96
SCN3A-209ENST00000639244 KLK12Q9UKR0 248 aa2.81□□□□□ -1.96
SCN3A-209ENST00000639244 M0QY20 66 aa2.81□□□□□ -1.96
SCN3A-209ENST00000639244 PROK1P58294 105 aa2.81□□□□□ -1.96
SCN3A-209ENST00000639244 STAB1Q9NY15 2570 aa2.81□□□□□ -1.96
SCN3A-209ENST00000639244 LINC00575Q6W349 94 aa2.81□□□□□ -1.96
SCN3A-209ENST00000639244 WFDC10BQ8IUB3 73 aa2.81□□□□□ -1.96
SCN3A-209ENST00000639244 NF1P21359 2839 aa2.81□□□□□ -1.96
SCN3A-209ENST00000639244 IGKV2-28A0A075B6P5 120 aa2.81□□□□□ -1.96
SCN3A-209ENST00000639244 IGKV2D-28P01615 120 aa2.81□□□□□ -1.96
SCN3A-209ENST00000639244 C1orf229Q6ZS94 237 aaPredicted RBP2.81□□□□□ -1.96
SCN3A-209ENST00000639244 C7orf33Q8WU49 177 aa2.81□□□□□ -1.96
SCN3A-209ENST00000639244 CIRBP-AS1Q8TBR5 109 aa2.8□□□□□ -1.96
SCN3A-209ENST00000639244 SPATA8Q6RVD6 105 aa2.8□□□□□ -1.96
SCN3A-209ENST00000639244 C10orf99Q6UWK7 81 aa2.8□□□□□ -1.96
SCN3A-209ENST00000639244 C5orf56Q8N8D9 126 aa2.8□□□□□ -1.96
SCN3A-209ENST00000639244 ODF3BA8MYP8 253 aa2.79□□□□□ -1.96
SCN3A-209ENST00000639244 IGLV7-46A0A075B6I9 117 aa2.79□□□□□ -1.96
SCN3A-209ENST00000639244 DMXL2Q8TDJ6 3036 aa2.79□□□□□ -1.96
SCN3A-209ENST00000639244 BRCA2P51587 3418 aa2.79□□□□□ -1.96
SCN3A-209ENST00000639244 CFAP54Q96N23 3096 aa2.78□□□□□ -1.96
SCN3A-209ENST00000639244 C16orf74Q96GX8 76 aa2.78□□□□□ -1.96
SCN3A-209ENST00000639244 CDH23Q9H251 3354 aa2.78□□□□□ -1.96
SCN3A-209ENST00000639244 NBEAL2Q6ZNJ1 2754 aa2.78□□□□□ -1.96
SCN3A-209ENST00000639244 A0A1W2PNU3 283 aaPredicted RBP2.78□□□□□ -1.96
SCN3A-209ENST00000639244 KRTAP4-16G5E9R7 235 aaPredicted RBP2.78□□□□□ -1.96
SCN3A-209ENST00000639244 IGLV7-43P04211 117 aa2.78□□□□□ -1.96
SCN3A-209ENST00000639244 CRYBG3Q68DQ2 2970 aa2.78□□□□□ -1.96
SCN3A-209ENST00000639244 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.78□□□□□ -1.96
SCN3A-209ENST00000639244 LAMA3Q16787 3333 aa2.78□□□□□ -1.96
SCN3A-209ENST00000639244 USP34Q70CQ2 3546 aa2.77□□□□□ -1.97
SCN3A-209ENST00000639244 PLAC8Q9NZF1 115 aa2.77□□□□□ -1.97
SCN3A-209ENST00000639244 Q8NBF4 154 aa2.77□□□□□ -1.97
SCN3A-209ENST00000639244 TP53AIP1Q9HCN2 124 aa2.77□□□□□ -1.97
SCN3A-209ENST00000639244 FRYQ5TBA9 3013 aa2.77□□□□□ -1.97
SCN3A-209ENST00000639244 ITPR2Q14571 2701 aa2.77□□□□□ -1.97
SCN3A-209ENST00000639244 VPS13AQ96RL7 3174 aa2.77□□□□□ -1.97
SCN3A-209ENST00000639244 KAAG1Q9UBP8 84 aa2.77□□□□□ -1.97
SCN3A-209ENST00000639244 IGSF10Q6WRI0 2623 aa2.76□□□□□ -1.97
SCN3A-209ENST00000639244 SPINK6Q6UWN8 80 aa2.76□□□□□ -1.97
SCN3A-209ENST00000639244 SSBP3-AS1Q7Z2R9 100 aa2.76□□□□□ -1.97
SCN3A-209ENST00000639244 C4orf3Q8WVX3 66 aa2.76□□□□□ -1.97
SCN3A-209ENST00000639244 SPART-AS1P0CW21 52 aa2.76□□□□□ -1.97
SCN3A-209ENST00000639244 ST20-AS1Q8NBB2 130 aa2.76□□□□□ -1.97
SCN3A-209ENST00000639244 A8MUU9 505 aa2.76□□□□□ -1.97
SCN3A-209ENST00000639244 MKI67P46013 3256 aaKnown RBP2.76□□□□□ -1.97
SCN3A-209ENST00000639244 ITPR3Q14573 2671 aa2.76□□□□□ -1.97
SCN3A-209ENST00000639244 M0R2N4 97 aa2.76□□□□□ -1.97
SCN3A-209ENST00000639244 WFDC13Q8IUB5 93 aa2.76□□□□□ -1.97
SCN3A-209ENST00000639244 DEFB131BA0A096LNP1 70 aa2.75□□□□□ -1.97
SCN3A-209ENST00000639244 LAMA1P25391 3075 aa2.75□□□□□ -1.97
SCN3A-209ENST00000639244 DNAH14Q0VDD8 3507 aa2.75□□□□□ -1.97
SCN3A-209ENST00000639244 KRTAP17-1Q9BYP8 105 aa2.75□□□□□ -1.97
SCN3A-209ENST00000639244 A0A1B0GVX0 72 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms