RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 DAND5Q8N907 189 aa3.06□□□□□ -1.92
PDE4D-229ENST00000638939 KCNQ1DNQ9H478 68 aa3.06□□□□□ -1.92
PDE4D-229ENST00000638939 SLC25A20O43772 301 aa3.05□□□□□ -1.92
PDE4D-229ENST00000638939 SMCR5Q8TEV8 140 aa3.05□□□□□ -1.92
PDE4D-229ENST00000638939 ETDCA0A1B0GVM5 59 aa3.04□□□□□ -1.92
PDE4D-229ENST00000638939 NCR3O14931 201 aa3.04□□□□□ -1.92
PDE4D-229ENST00000638939 NDUFA6P56556 154 aa3.04□□□□□ -1.92
PDE4D-229ENST00000638939 LINC00158P58513 81 aa3.04□□□□□ -1.92
PDE4D-229ENST00000638939 MOBPQ13875 183 aa3.04□□□□□ -1.92
PDE4D-229ENST00000638939 TMEM170BQ5T4T1 132 aa3.04□□□□□ -1.92
PDE4D-229ENST00000638939 UQCC3Q6UW78 93 aa3.04□□□□□ -1.92
PDE4D-229ENST00000638939 SSBP3-AS1Q7Z2R9 100 aa3.04□□□□□ -1.92
PDE4D-229ENST00000638939 BOD1L2Q8IYS8 172 aa3.04□□□□□ -1.92
PDE4D-229ENST00000638939 TRBV10-3A0A0K0K1G6 114 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 TMEM223A0PJW6 202 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 HSBP1O75506 76 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 SNAPINO95295 136 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 LINC00614P0C842 121 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 CFC1BP0CG36 223 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 S100A12P80511 92 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 FABP9Q0Z7S8 132 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 CLLU1Q5K131 121 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 Q6ZRX8 168 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 BAGE3Q86Y29 109 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 C18orf32Q8TCD1 76 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 SEC11CQ9BY50 192 aa3.03□□□□□ -1.92
PDE4D-229ENST00000638939 FLGP20930 4061 aaPredicted RBP3.03□□□□□ -1.93
PDE4D-229ENST00000638939 TRAV12-1A0A0B4J245 112 aa3.02□□□□□ -1.93
PDE4D-229ENST00000638939 TMEM218A2RU14 115 aa3.02□□□□□ -1.93
PDE4D-229ENST00000638939 LINC00587B1AMM8 73 aa3.02□□□□□ -1.93
PDE4D-229ENST00000638939 SMIM13P0DJ93 91 aa3.02□□□□□ -1.93
PDE4D-229ENST00000638939 MT1HP80294 61 aa3.02□□□□□ -1.93
PDE4D-229ENST00000638939 RHEBQ15382 184 aa3.02□□□□□ -1.93
PDE4D-229ENST00000638939 PMCHL1Q16048 86 aa3.02□□□□□ -1.93
PDE4D-229ENST00000638939 MEIG1Q5JSS6 88 aa3.02□□□□□ -1.93
PDE4D-229ENST00000638939 MIR7-3HGQ8N6C7 128 aa3.02□□□□□ -1.93
PDE4D-229ENST00000638939 Q9BRP9 147 aa3.02□□□□□ -1.93
PDE4D-229ENST00000638939 LOC107984156A0A0G2JMH3 177 aa3.01□□□□□ -1.93
PDE4D-229ENST00000638939 TRBV10-2A0A0K0K1G8 114 aa3.01□□□□□ -1.93
PDE4D-229ENST00000638939 ERC2-IT1O76042 136 aa3.01□□□□□ -1.93
PDE4D-229ENST00000638939 ARL17AQ8IVW1 177 aa3.01□□□□□ -1.93
PDE4D-229ENST00000638939 MAP1LC3CQ9BXW4 147 aa3.01□□□□□ -1.93
PDE4D-229ENST00000638939 SERF1AO75920 110 aa3□□□□□ -1.93
PDE4D-229ENST00000638939 CFC1P0CG37 223 aa3□□□□□ -1.93
PDE4D-229ENST00000638939 DDTP30046 118 aa3□□□□□ -1.93
PDE4D-229ENST00000638939 C10orf91Q5T1B1 145 aa3□□□□□ -1.93
PDE4D-229ENST00000638939 LIMD2Q9BT23 127 aa3□□□□□ -1.93
PDE4D-229ENST00000638939 SPANXB1Q9NS25 103 aaPredicted RBP3□□□□□ -1.93
PDE4D-229ENST00000638939 IGLV8-61A0A075B6I0 122 aa2.99□□□□□ -1.93
PDE4D-229ENST00000638939 MYMXA0A1B0GTQ4 84 aa2.99□□□□□ -1.93
PDE4D-229ENST00000638939 NDUFC2O95298 119 aa2.99□□□□□ -1.93
PDE4D-229ENST00000638939 IGLV6-57P01721 117 aa2.99□□□□□ -1.93
PDE4D-229ENST00000638939 IFITM2Q01629 132 aa2.99□□□□□ -1.93
PDE4D-229ENST00000638939 JOSD1Q15040 202 aaPredicted RBP2.99□□□□□ -1.93
PDE4D-229ENST00000638939 C9orf153Q5TBE3 101 aa2.99□□□□□ -1.93
PDE4D-229ENST00000638939 IFI27L1Q96BM0 104 aa2.99□□□□□ -1.93
PDE4D-229ENST00000638939 CHCHD1Q96BP2 118 aaKnown RBP2.99□□□□□ -1.93
PDE4D-229ENST00000638939 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
PDE4D-229ENST00000638939 TRAPPC1Q9Y5R8 145 aa2.99□□□□□ -1.93
PDE4D-229ENST00000638939 TRAV23DV6A0A075B6W5 121 aa2.98□□□□□ -1.93
PDE4D-229ENST00000638939 MT3P25713 68 aa2.98□□□□□ -1.93
PDE4D-229ENST00000638939 TSPEAR-AS2P59090 65 aa2.98□□□□□ -1.93
PDE4D-229ENST00000638939 KRTAP10-6P60371 365 aaPredicted RBP2.98□□□□□ -1.93
PDE4D-229ENST00000638939 VAMP3Q15836 100 aa2.98□□□□□ -1.93
PDE4D-229ENST00000638939 COMMD7Q86VX2 200 aa2.98□□□□□ -1.93
PDE4D-229ENST00000638939 MIEN1Q9BRT3 115 aa2.98□□□□□ -1.93
PDE4D-229ENST00000638939 ZNF73O43830 326 aaPredicted RBP2.97□□□□□ -1.93
PDE4D-229ENST00000638939 SPRR1BP22528 89 aa2.97□□□□□ -1.93
PDE4D-229ENST00000638939 PLNP26678 52 aa2.97□□□□□ -1.93
PDE4D-229ENST00000638939 NMUP48645 174 aa2.97□□□□□ -1.93
PDE4D-229ENST00000638939 PCOTHQ58A44 107 aa2.97□□□□□ -1.93
PDE4D-229ENST00000638939 COA6Q5JTJ3 125 aaKnown RBP2.97□□□□□ -1.93
PDE4D-229ENST00000638939 KRTAP4-7Q9BYR0 210 aa2.97□□□□□ -1.93
PDE4D-229ENST00000638939 RPS10P5Q9NQ39 176 aa2.97□□□□□ -1.93
PDE4D-229ENST00000638939 DHRS4-AS1Q9P1J3 65 aa2.97□□□□□ -1.93
PDE4D-229ENST00000638939 CBY1Q9Y3M2 126 aa2.97□□□□□ -1.93
PDE4D-229ENST00000638939 LEPROTO15243 131 aa2.96□□□□□ -1.94
PDE4D-229ENST00000638939 CD164Q04900 197 aa2.96□□□□□ -1.94
PDE4D-229ENST00000638939 S100A7L2Q5SY68 101 aa2.96□□□□□ -1.94
PDE4D-229ENST00000638939 SLC25A34Q6PIV7 304 aa2.96□□□□□ -1.94
PDE4D-229ENST00000638939 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
PDE4D-229ENST00000638939 J3QQQ9 107 aa2.95□□□□□ -1.94
PDE4D-229ENST00000638939 HERVK_113P61574 105 aa2.95□□□□□ -1.94
PDE4D-229ENST00000638939 CXCL6P80162 114 aa2.95□□□□□ -1.94
PDE4D-229ENST00000638939 Q1RN00 199 aa2.95□□□□□ -1.94
PDE4D-229ENST00000638939 Q5XG85 94 aa2.95□□□□□ -1.94
PDE4D-229ENST00000638939 ST20-AS1Q8NBB2 130 aa2.95□□□□□ -1.94
PDE4D-229ENST00000638939 YPEL4Q96NS1 127 aa2.95□□□□□ -1.94
PDE4D-229ENST00000638939 C9orf92A6NGG3 77 aa2.94□□□□□ -1.94
PDE4D-229ENST00000638939 LGALS3P17931 250 aaKnown RBP2.94□□□□□ -1.94
PDE4D-229ENST00000638939 HINT1P49773 126 aaPredicted RBP2.94□□□□□ -1.94
PDE4D-229ENST00000638939 SOSTDC1Q6X4U4 206 aa2.94□□□□□ -1.94
PDE4D-229ENST00000638939 A6NDN8 102 aa2.93□□□□□ -1.94
PDE4D-229ENST00000638939 DPM2O94777 84 aa2.93□□□□□ -1.94
PDE4D-229ENST00000638939 ELOF1P60002 83 aaKnown RBP2.93□□□□□ -1.94
PDE4D-229ENST00000638939 RPL37P61927 97 aaKnown RBP2.93□□□□□ -1.94
PDE4D-229ENST00000638939 SVBPQ8N300 66 aa2.93□□□□□ -1.94
PDE4D-229ENST00000638939 SPANXCQ9NY87 97 aa2.93□□□□□ -1.94
PDE4D-229ENST00000638939 LAMTOR3Q9UHA4 124 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms