RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 UBL5Q9BZL1 73 aa6.78□□□□□ -1.32
PAX6-236ENST00000638685 TGP01266 2768 aa6.78□□□□□ -1.32
PAX6-236ENST00000638685 IGKV3D-7A0A0C4DH55 119 aa6.77□□□□□ -1.32
PAX6-236ENST00000638685 UQCRQO14949 82 aa6.77□□□□□ -1.32
PAX6-236ENST00000638685 DSCR8Q96T75 97 aa6.77□□□□□ -1.32
PAX6-236ENST00000638685 SYCNQ0VAF6 134 aa6.77□□□□□ -1.33
PAX6-236ENST00000638685 Q6ZQT0 140 aa6.77□□□□□ -1.33
PAX6-236ENST00000638685 C3orf22Q8N5N4 141 aa6.76□□□□□ -1.33
PAX6-236ENST00000638685 KRTAP1-5Q9BYS1 174 aa6.76□□□□□ -1.33
PAX6-236ENST00000638685 DNAH2Q9P225 4427 aa6.76□□□□□ -1.33
PAX6-236ENST00000638685 SS18L2Q9UHA2 77 aa6.75□□□□□ -1.33
PAX6-236ENST00000638685 FBN3Q75N90 2809 aa6.75□□□□□ -1.33
PAX6-236ENST00000638685 Q6ZRP5 223 aa6.74□□□□□ -1.33
PAX6-236ENST00000638685 COX7CP15954 63 aa6.74□□□□□ -1.33
PAX6-236ENST00000638685 APLNQ9ULZ1 77 aa6.74□□□□□ -1.33
PAX6-236ENST00000638685 C9orf153Q5TBE3 101 aa6.73□□□□□ -1.33
PAX6-236ENST00000638685 NKAPP1Q8N9T2 125 aa6.73□□□□□ -1.33
PAX6-236ENST00000638685 RMI2Q96E14 147 aa6.73□□□□□ -1.33
PAX6-236ENST00000638685 UPK3BQ9BT76 320 aa6.73□□□□□ -1.33
PAX6-236ENST00000638685 TLX1NBP0CAT3 122 aa6.72□□□□□ -1.33
PAX6-236ENST00000638685 LINC00528Q8N1L1 170 aa6.72□□□□□ -1.33
PAX6-236ENST00000638685 USP17L23D6RBM5 183 aa6.71□□□□□ -1.34
PAX6-236ENST00000638685 KCNQ1DNQ9H478 68 aa6.71□□□□□ -1.34
PAX6-236ENST00000638685 PLA2G2DQ9UNK4 145 aa6.71□□□□□ -1.34
PAX6-236ENST00000638685 HECTD4Q9Y4D8 3996 aa6.71□□□□□ -1.34
PAX6-236ENST00000638685 TRBV7-4A0A0J9YYF1 115 aa6.71□□□□□ -1.34
PAX6-236ENST00000638685 A0A087WVE0 104 aa6.7□□□□□ -1.34
PAX6-236ENST00000638685 SERP2Q8N6R1 65 aa6.7□□□□□ -1.34
PAX6-236ENST00000638685 CRYGAP11844 174 aa6.69□□□□□ -1.34
PAX6-236ENST00000638685 HYDINQ4G0P3 5121 aa6.68□□□□□ -1.34
PAX6-236ENST00000638685 CXCL6P80162 114 aa6.67□□□□□ -1.34
PAX6-236ENST00000638685 Q6ZVQ6 151 aa6.67□□□□□ -1.34
PAX6-236ENST00000638685 IGLV5-37A0A075B6J1 123 aa6.67□□□□□ -1.34
PAX6-236ENST00000638685 LINC01547P58512 204 aaPredicted RBP6.67□□□□□ -1.34
PAX6-236ENST00000638685 C7orf33Q8WU49 177 aa6.67□□□□□ -1.34
PAX6-236ENST00000638685 SERTAD4-AS1Q5TG53 156 aa6.66□□□□□ -1.34
PAX6-236ENST00000638685 DHRS4-AS1Q9P1J3 65 aa6.66□□□□□ -1.34
PAX6-236ENST00000638685 BCE1O60756 84 aa6.66□□□□□ -1.34
PAX6-236ENST00000638685 HAMPP81172 84 aa6.66□□□□□ -1.34
PAX6-236ENST00000638685 FAM19A1Q7Z5A9 133 aa6.66□□□□□ -1.34
PAX6-236ENST00000638685 UBE2DNLQ8IWF7 75 aa6.66□□□□□ -1.34
PAX6-236ENST00000638685 M0R2N4 97 aa6.65□□□□□ -1.35
PAX6-236ENST00000638685 PRYO14603 147 aa6.65□□□□□ -1.35
PAX6-236ENST00000638685 DNAH17Q9UFH2 4485 aa6.64□□□□□ -1.35
PAX6-236ENST00000638685 IGLV1-50A0A075B6I6 118 aa6.64□□□□□ -1.35
PAX6-236ENST00000638685 LOC107984640A0A0U1RRK4 108 aa6.63□□□□□ -1.35
PAX6-236ENST00000638685 Q6ZRX8 168 aa6.63□□□□□ -1.35
PAX6-236ENST00000638685 SMIM20Q8N5G0 67 aa6.62□□□□□ -1.35
PAX6-236ENST00000638685 ETDCA0A1B0GVM5 59 aa6.62□□□□□ -1.35
PAX6-236ENST00000638685 FAM168BA1KXE4 195 aa6.62□□□□□ -1.35
PAX6-236ENST00000638685 NUPR2A6NF83 97 aa6.62□□□□□ -1.35
PAX6-236ENST00000638685 FRAS1Q86XX4 4008 aa6.62□□□□□ -1.35
PAX6-236ENST00000638685 SPRR1AP35321 89 aa6.61□□□□□ -1.35
PAX6-236ENST00000638685 KRTAP7-1Q8IUC3 87 aa6.61□□□□□ -1.35
PAX6-236ENST00000638685 A0A1B0GW54 56 aa6.61□□□□□ -1.35
PAX6-236ENST00000638685 KRTAP4-16G5E9R7 235 aaPredicted RBP6.61□□□□□ -1.35
PAX6-236ENST00000638685 IGLV5-48A0A075B6I7 105 aa6.6□□□□□ -1.35
PAX6-236ENST00000638685 RPL37AP8A6NKH3 93 aa6.6□□□□□ -1.35
PAX6-236ENST00000638685 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
PAX6-236ENST00000638685 Q8N377 158 aa6.6□□□□□ -1.35
PAX6-236ENST00000638685 DNAH6Q9C0G6 4158 aa6.6□□□□□ -1.35
PAX6-236ENST00000638685 DEFB105AQ8NG35 78 aa6.6□□□□□ -1.35
PAX6-236ENST00000638685 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.58□□□□□ -1.36
PAX6-236ENST00000638685 NBDYA0A0U1RRE5 68 aa6.58□□□□□ -1.36
PAX6-236ENST00000638685 TMEM258P61165 79 aa6.58□□□□□ -1.36
PAX6-236ENST00000638685 TRAV7A0A075B6U4 112 aa6.58□□□□□ -1.36
PAX6-236ENST00000638685 PSCAO43653 123 aa6.58□□□□□ -1.36
PAX6-236ENST00000638685 NREPQ16612 68 aa6.58□□□□□ -1.36
PAX6-236ENST00000638685 Q9BRP9 147 aa6.58□□□□□ -1.36
PAX6-236ENST00000638685 DNAH8Q96JB1 4490 aa6.58□□□□□ -1.36
PAX6-236ENST00000638685 DNAH11Q96DT5 4516 aa6.57□□□□□ -1.36
PAX6-236ENST00000638685 FUSP35637 526 aaKnown RBP eCLIP6.57□□□□□ -1.36
PAX6-236ENST00000638685 Q6ZRN7 208 aaPredicted RBP6.57□□□□□ -1.36
PAX6-236ENST00000638685 FAM19A5Q7Z5A7 132 aaPredicted RBP6.57□□□□□ -1.36
PAX6-236ENST00000638685 SRRM2Q9UQ35 2752 aaKnown RBP6.56□□□□□ -1.36
PAX6-236ENST00000638685 DNAH5Q8TE73 4624 aa6.56□□□□□ -1.36
PAX6-236ENST00000638685 CNBPP62633 177 aaKnown RBP6.56□□□□□ -1.36
PAX6-236ENST00000638685 REG3GQ6UW15 175 aa6.56□□□□□ -1.36
PAX6-236ENST00000638685 LRCOL1A6NCL2 159 aa6.55□□□□□ -1.36
PAX6-236ENST00000638685 C16orf90A8MZG2 172 aa6.55□□□□□ -1.36
PAX6-236ENST00000638685 C14orf177Q52M58 125 aa6.55□□□□□ -1.36
PAX6-236ENST00000638685 A0A096LNI7 61 aa6.54□□□□□ -1.36
PAX6-236ENST00000638685 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
PAX6-236ENST00000638685 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
PAX6-236ENST00000638685 UBE2BP63146 152 aa6.54□□□□□ -1.36
PAX6-236ENST00000638685 SCXQ7RTU7 201 aa6.53□□□□□ -1.36
PAX6-236ENST00000638685 CYSTM1Q9H1C7 97 aa6.53□□□□□ -1.36
PAX6-236ENST00000638685 ALMS1Q8TCU4 4167 aa6.53□□□□□ -1.36
PAX6-236ENST00000638685 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
PAX6-236ENST00000638685 J3KT08 172 aa6.53□□□□□ -1.36
PAX6-236ENST00000638685 BPY2O14599 106 aa6.53□□□□□ -1.36
PAX6-236ENST00000638685 TNP2Q05952 138 aa6.53□□□□□ -1.36
PAX6-236ENST00000638685 C1orf137Q5JT78 98 aa6.53□□□□□ -1.36
PAX6-236ENST00000638685 FAT2Q9NYQ8 4349 aa6.53□□□□□ -1.36
PAX6-236ENST00000638685 SACSQ9NZJ4 4579 aa6.53□□□□□ -1.36
PAX6-236ENST00000638685 CHTF8P0CG12 524 aa6.52□□□□□ -1.37
PAX6-236ENST00000638685 C3orf84H3BNL1 204 aa6.52□□□□□ -1.37
PAX6-236ENST00000638685 C20orf197Q8N268 126 aa6.52□□□□□ -1.37
PAX6-236ENST00000638685 ST20-AS1Q8NBB2 130 aa6.52□□□□□ -1.37
PAX6-236ENST00000638685 PKIGQ9Y2B9 76 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms