RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 LRCOL1A6NCL2 159 aa8.12□□□□□ -1.11
GFAP-228ENST00000638488 X6R8D5 127 aa8.12□□□□□ -1.11
GFAP-228ENST00000638488 CELA1Q9UNI1 258 aa8.11□□□□□ -1.11
GFAP-228ENST00000638488 IGHV4-30-4P0DP06 118 aa8.11□□□□□ -1.11
GFAP-228ENST00000638488 GYPEP15421 78 aa8.11□□□□□ -1.11
GFAP-228ENST00000638488 SYCNQ0VAF6 134 aa8.11□□□□□ -1.11
GFAP-228ENST00000638488 TRRAPQ9Y4A5 3859 aa8.11□□□□□ -1.11
GFAP-228ENST00000638488 PSCAO43653 123 aa8.1□□□□□ -1.11
GFAP-228ENST00000638488 C9orf116Q5BN46 136 aaPredicted RBP8.1□□□□□ -1.11
GFAP-228ENST00000638488 LINC00612Q8N6U2 182 aa8.1□□□□□ -1.11
GFAP-228ENST00000638488 TEP1Q99973 2627 aaKnown RBP8.1□□□□□ -1.11
GFAP-228ENST00000638488 ELOF1P60002 83 aaKnown RBP8.09□□□□□ -1.11
GFAP-228ENST00000638488 SMIM29Q86T20 159 aa8.09□□□□□ -1.11
GFAP-228ENST00000638488 LINC00588Q9Y4M8 146 aa8.09□□□□□ -1.11
GFAP-228ENST00000638488 HIGD2BQ4VC39 106 aa8.08□□□□□ -1.12
GFAP-228ENST00000638488 LINC00269Q8N2A0 174 aa8.08□□□□□ -1.12
GFAP-228ENST00000638488 FAM30AQ9NZY2 134 aa8.08□□□□□ -1.12
GFAP-228ENST00000638488 C4orf48Q5BLP8 95 aa8.08□□□□□ -1.12
GFAP-228ENST00000638488 ZNF73O43830 326 aaPredicted RBP8.07□□□□□ -1.12
GFAP-228ENST00000638488 UBE2AP49459 152 aa8.07□□□□□ -1.12
GFAP-228ENST00000638488 CLPSL2Q6UWE3 100 aa8.07□□□□□ -1.12
GFAP-228ENST00000638488 RBM12B-AS1Q9P1G2 102 aa8.07□□□□□ -1.12
GFAP-228ENST00000638488 A8MUN3 132 aa8.07□□□□□ -1.12
GFAP-228ENST00000638488 A0A1B0GW54 56 aa8.06□□□□□ -1.12
GFAP-228ENST00000638488 Q5VV11 94 aa8.06□□□□□ -1.12
GFAP-228ENST00000638488 A0A0J9YWU9 116 aa8.06□□□□□ -1.12
GFAP-228ENST00000638488 HTN3P15516 51 aa8.06□□□□□ -1.12
GFAP-228ENST00000638488 APOC4P55056 127 aa8.05□□□□□ -1.12
GFAP-228ENST00000638488 ETDCA0A1B0GVM5 59 aa8.05□□□□□ -1.12
GFAP-228ENST00000638488 NDUFB1O75438 58 aa8.05□□□□□ -1.12
GFAP-228ENST00000638488 PRO0255Q9UI72 69 aa8.05□□□□□ -1.12
GFAP-228ENST00000638488 F8P00451 2351 aa8.05□□□□□ -1.12
GFAP-228ENST00000638488 FLNBO75369 2602 aaKnown RBP8.04□□□□□ -1.12
GFAP-228ENST00000638488 C10orf25Q5T742 122 aa8.04□□□□□ -1.12
GFAP-228ENST00000638488 CHCHD10Q8WYQ3 142 aaPredicted RBP8.04□□□□□ -1.12
GFAP-228ENST00000638488 NDUFS5O43920 106 aa8.04□□□□□ -1.12
GFAP-228ENST00000638488 KLK12Q9UKR0 248 aa8.02□□□□□ -1.12
GFAP-228ENST00000638488 M0R378 163 aa8.02□□□□□ -1.13
GFAP-228ENST00000638488 LIMD2Q9BT23 127 aa8.02□□□□□ -1.13
GFAP-228ENST00000638488 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.01□□□□□ -1.13
GFAP-228ENST00000638488 GVQW2A0A096LPI5 108 aaPredicted RBP8.01□□□□□ -1.13
GFAP-228ENST00000638488 UNQ6190/PRO20217Q6UXQ8 127 aa8.01□□□□□ -1.13
GFAP-228ENST00000638488 ATP11AUNQ6ZP68 121 aa8.01□□□□□ -1.13
GFAP-228ENST00000638488 SPAG11BQ08648 103 aa8□□□□□ -1.13
GFAP-228ENST00000638488 C16orf90A8MZG2 172 aa8□□□□□ -1.13
GFAP-228ENST00000638488 C3orf84H3BNL1 204 aa8□□□□□ -1.13
GFAP-228ENST00000638488 PHF5AQ7RTV0 110 aaKnown RBP8□□□□□ -1.13
GFAP-228ENST00000638488 LINC00528Q8N1L1 170 aa8□□□□□ -1.13
GFAP-228ENST00000638488 A8MU10 97 aa7.99□□□□□ -1.13
GFAP-228ENST00000638488 Q8NAQ8 132 aa7.99□□□□□ -1.13
GFAP-228ENST00000638488 IGLV10-54A0A075B6I4 117 aa7.99□□□□□ -1.13
GFAP-228ENST00000638488 CHKB-CPT1BH3BT56 60 aa7.98□□□□□ -1.13
GFAP-228ENST00000638488 CYSRT1A8MQ03 144 aa7.98□□□□□ -1.13
GFAP-228ENST00000638488 REG3AQ06141 175 aa7.98□□□□□ -1.13
GFAP-228ENST00000638488 IGLV5-48A0A075B6I7 105 aa7.97□□□□□ -1.13
GFAP-228ENST00000638488 ANGP03950 147 aaKnown RBP7.97□□□□□ -1.13
GFAP-228ENST00000638488 SPART-AS1P0CW21 52 aa7.97□□□□□ -1.13
GFAP-228ENST00000638488 B9D2Q9BPU9 175 aa7.97□□□□□ -1.13
GFAP-228ENST00000638488 KRTAP24-1Q3LI83 254 aa7.96□□□□□ -1.14
GFAP-228ENST00000638488 Q8N9P0 234 aaPredicted RBP7.96□□□□□ -1.14
GFAP-228ENST00000638488 A6NN06 94 aa7.96□□□□□ -1.14
GFAP-228ENST00000638488 HCG22E2RYF7 251 aa7.95□□□□□ -1.14
GFAP-228ENST00000638488 KRTAP10-11P60412 298 aa7.95□□□□□ -1.14
GFAP-228ENST00000638488 PRR4Q16378 134 aa7.95□□□□□ -1.14
GFAP-228ENST00000638488 KPRPQ5T749 579 aaPredicted RBP7.95□□□□□ -1.14
GFAP-228ENST00000638488 SPANXA2-OT1Q8N9U9 137 aa7.95□□□□□ -1.14
GFAP-228ENST00000638488 Q9BRP9 147 aa7.95□□□□□ -1.14
GFAP-228ENST00000638488 Q75L30 129 aa7.94□□□□□ -1.14
GFAP-228ENST00000638488 ST20-AS1Q8NBB2 130 aa7.94□□□□□ -1.14
GFAP-228ENST00000638488 VPREB1P12018 145 aa7.94□□□□□ -1.14
GFAP-228ENST00000638488 FBN1P35555 2871 aaKnown RBP7.94□□□□□ -1.14
GFAP-228ENST00000638488 STAB1Q9NY15 2570 aa7.92□□□□□ -1.14
GFAP-228ENST00000638488 SPTSSBQ8NFR3 76 aa7.92□□□□□ -1.14
GFAP-228ENST00000638488 KCNQ1DNQ9H478 68 aa7.92□□□□□ -1.14
GFAP-228ENST00000638488 DSCR10P59022 87 aa7.92□□□□□ -1.14
GFAP-228ENST00000638488 LINC00208Q96KT6 92 aa7.92□□□□□ -1.14
GFAP-228ENST00000638488 PRR15LQ9BU68 103 aa7.92□□□□□ -1.14
GFAP-228ENST00000638488 XAGE1AQ9HD64 81 aa7.92□□□□□ -1.14
GFAP-228ENST00000638488 C6orf48Q9UBA6 75 aa7.91□□□□□ -1.14
GFAP-228ENST00000638488 MP68P56378 58 aa7.91□□□□□ -1.14
GFAP-228ENST00000638488 LCA10Q71F78 164 aa7.91□□□□□ -1.14
GFAP-228ENST00000638488 LOC101927531A0A1B0GV80 90 aa7.9□□□□□ -1.14
GFAP-228ENST00000638488 PKD1L1Q8TDX9 2849 aa7.9□□□□□ -1.15
GFAP-228ENST00000638488 A0A1W2PNM2 257 aa7.9□□□□□ -1.15
GFAP-228ENST00000638488 C7orf65Q6ZTY9 151 aa7.9□□□□□ -1.15
GFAP-228ENST00000638488 K7EQZ3 153 aa7.89□□□□□ -1.15
GFAP-228ENST00000638488 Q8N377 158 aa7.89□□□□□ -1.15
GFAP-228ENST00000638488 Q8NBF4 154 aa7.89□□□□□ -1.15
GFAP-228ENST00000638488 SPRR4Q96PI1 79 aa7.88□□□□□ -1.15
GFAP-228ENST00000638488 CDC42SE1Q9NRR8 79 aa7.88□□□□□ -1.15
GFAP-228ENST00000638488 MAST4O15021 2626 aa7.88□□□□□ -1.15
GFAP-228ENST00000638488 H3BPC8 53 aa7.88□□□□□ -1.15
GFAP-228ENST00000638488 LELP1Q5T871 98 aa7.87□□□□□ -1.15
GFAP-228ENST00000638488 PRB2P02812 416 aaPredicted RBP7.87□□□□□ -1.15
GFAP-228ENST00000638488 A6NED7 52 aa7.86□□□□□ -1.15
GFAP-228ENST00000638488 TNP2Q05952 138 aa7.86□□□□□ -1.15
GFAP-228ENST00000638488 C1orf137Q5JT78 98 aa7.85□□□□□ -1.15
GFAP-228ENST00000638488 ANK2Q01484 3957 aa7.85□□□□□ -1.15
GFAP-228ENST00000638488 EGFEM1PQ0D2K5 195 aa7.84□□□□□ -1.15
GFAP-228ENST00000638488 PRR34Q9NV39 138 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms