RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-223ENST00000637293 KRTAP10-5P60370 271 aa1.04□□□□□ -2.24
GABRB3-223ENST00000637293 KRTAP6-3Q3LI67 103 aa1.04□□□□□ -2.24
GABRB3-223ENST00000637293 C10orf95Q9H7T3 257 aa1.04□□□□□ -2.24
GABRB3-223ENST00000637293 NFAT5O94916 1531 aa1.04□□□□□ -2.24
GABRB3-223ENST00000637293 ATP7AQ04656 1500 aa1.04□□□□□ -2.24
GABRB3-223ENST00000637293 DDX60Q8IY21 1712 aaKnown RBP1.03□□□□□ -2.24
GABRB3-223ENST00000637293 CACNA1EQ15878 2313 aa1.03□□□□□ -2.24
GABRB3-223ENST00000637293 CRIP1P50238 77 aa1.03□□□□□ -2.24
GABRB3-223ENST00000637293 LINC00158P58513 81 aa1.03□□□□□ -2.24
GABRB3-223ENST00000637293 KRTAP12-4P60329 112 aa1.03□□□□□ -2.24
GABRB3-223ENST00000637293 PRO3102Q9H379 93 aa1.03□□□□□ -2.24
GABRB3-223ENST00000637293 CDKN2A-AS1Q9UH64 79 aa1.03□□□□□ -2.24
GABRB3-223ENST00000637293 LYNX1G3V0Z9 82 aa1.02□□□□□ -2.25
GABRB3-223ENST00000637293 C4AP0C0L4 1744 aa1.02□□□□□ -2.25
GABRB3-223ENST00000637293 C4BP0C0L5 1744 aa1.02□□□□□ -2.25
GABRB3-223ENST00000637293 Q6ZSA8 131 aa1.02□□□□□ -2.25
GABRB3-223ENST00000637293 SAMD9LQ8IVG5 1584 aa1.02□□□□□ -2.25
GABRB3-223ENST00000637293 Q5VSD8 79 aa1.01□□□□□ -2.25
GABRB3-223ENST00000637293 TIMM8BQ9Y5J9 83 aaPredicted RBP1.01□□□□□ -2.25
GABRB3-223ENST00000637293 CNOT1A5YKK6 2376 aaKnown RBP1.01□□□□□ -2.25
GABRB3-223ENST00000637293 BPTFQ12830 3046 aa1□□□□□ -2.25
GABRB3-223ENST00000637293 NDUFA3O95167 84 aa1□□□□□ -2.25
GABRB3-223ENST00000637293 KRTAP5-4Q6L8H1 288 aa1□□□□□ -2.25
GABRB3-223ENST00000637293 CDC42BPAQ5VT25 1732 aa1□□□□□ -2.25
GABRB3-223ENST00000637293 PIEZO2Q9H5I5 2752 aa1□□□□□ -2.25
GABRB3-223ENST00000637293 OTOGLQ3ZCN5 2332 aa0.99□□□□□ -2.25
GABRB3-223ENST00000637293 SORL1Q92673 2214 aa0.99□□□□□ -2.25
GABRB3-223ENST00000637293 KRTAP5-1Q6L8H4 278 aa0.99□□□□□ -2.25
GABRB3-223ENST00000637293 LCE3DQ9BYE3 92 aa0.99□□□□□ -2.25
GABRB3-223ENST00000637293 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.99□□□□□ -2.25
GABRB3-223ENST00000637293 IQGAP1P46940 1657 aa0.98□□□□□ -2.25
GABRB3-223ENST00000637293 SPINK4O60575 86 aa0.98□□□□□ -2.25
GABRB3-223ENST00000637293 MINOS1Q5TGZ0 78 aa0.98□□□□□ -2.25
GABRB3-223ENST00000637293 KRTAP5-11Q6L8G4 156 aa0.98□□□□□ -2.25
GABRB3-223ENST00000637293 DOPEY2Q9Y3R5 2298 aa0.98□□□□□ -2.25
GABRB3-223ENST00000637293 LMO7Q8WWI1 1683 aa0.97□□□□□ -2.25
GABRB3-223ENST00000637293 RP1L1Q8IWN7 2480 aaPredicted RBP0.97□□□□□ -2.25
GABRB3-223ENST00000637293 SPRR1AP35321 89 aa0.97□□□□□ -2.25
GABRB3-223ENST00000637293 SNRPGP62308 76 aaKnown RBP0.97□□□□□ -2.25
GABRB3-223ENST00000637293 LINC00308Q8TCZ7 52 aa0.97□□□□□ -2.25
GABRB3-223ENST00000637293 KRTAP4-4Q9BYR3 166 aa0.97□□□□□ -2.25
GABRB3-223ENST00000637293 A0A0D9SG42 100 aa0.96□□□□□ -2.26
GABRB3-223ENST00000637293 DEFB105AQ8NG35 78 aa0.96□□□□□ -2.26
GABRB3-223ENST00000637293 C6orf48Q9UBA6 75 aa0.96□□□□□ -2.26
GABRB3-223ENST00000637293 APLNQ9ULZ1 77 aa0.96□□□□□ -2.26
GABRB3-223ENST00000637293 COL6A6A6NMZ7 2263 aa0.96□□□□□ -2.26
GABRB3-223ENST00000637293 ASH1LQ9NR48 2969 aaKnown RBP0.96□□□□□ -2.26
GABRB3-223ENST00000637293 H0YAA0 97 aa0.95□□□□□ -2.26
GABRB3-223ENST00000637293 KIF21BO75037 1637 aa0.94□□□□□ -2.26
GABRB3-223ENST00000637293 HIVEP2P31629 2446 aa0.94□□□□□ -2.26
GABRB3-223ENST00000637293 SPRR1BP22528 89 aa0.94□□□□□ -2.26
GABRB3-223ENST00000637293 KRTAP12-3P60328 96 aa0.94□□□□□ -2.26
GABRB3-223ENST00000637293 H1FX-AS1Q4G0G2 97 aa0.94□□□□□ -2.26
GABRB3-223ENST00000637293 WFDC13Q8IUB5 93 aa0.94□□□□□ -2.26
GABRB3-223ENST00000637293 SMIM2Q9BVW6 85 aa0.94□□□□□ -2.26
GABRB3-223ENST00000637293 PTPRZ1P23471 2315 aaPredicted RBP0.94□□□□□ -2.26
GABRB3-223ENST00000637293 ROS1P08922 2347 aa0.93□□□□□ -2.26
GABRB3-223ENST00000637293 PLCE1Q9P212 2302 aa0.93□□□□□ -2.26
GABRB3-223ENST00000637293 PTPRQQ9UMZ3 2332 aa0.93□□□□□ -2.26
GABRB3-223ENST00000637293 IAPPP10997 89 aa0.93□□□□□ -2.26
GABRB3-223ENST00000637293 LOC730098B7Z3J9 87 aa0.92□□□□□ -2.26
GABRB3-223ENST00000637293 DUOX1Q9NRD9 1551 aa0.91□□□□□ -2.26
GABRB3-223ENST00000637293 NDUFA1O15239 70 aa0.91□□□□□ -2.26
GABRB3-223ENST00000637293 H3BUA1 57 aa0.9□□□□□ -2.27
GABRB3-223ENST00000637293 DEFB130BP0DP73 79 aa0.9□□□□□ -2.27
GABRB3-223ENST00000637293 DEFB130AP0DP74 79 aa0.9□□□□□ -2.27
GABRB3-223ENST00000637293 PRB3Q04118 309 aaPredicted RBP0.9□□□□□ -2.27
GABRB3-223ENST00000637293 LELP1Q5T871 98 aa0.9□□□□□ -2.27
GABRB3-223ENST00000637293 USF3Q68DE3 2245 aa0.9□□□□□ -2.27
GABRB3-223ENST00000637293 GCC2Q8IWJ2 1684 aa0.9□□□□□ -2.27
GABRB3-223ENST00000637293 C2CD3Q4AC94 2353 aa0.9□□□□□ -2.27
GABRB3-223ENST00000637293 TRIOBPQ9H2D6 2365 aa0.89□□□□□ -2.27
GABRB3-223ENST00000637293 MROH2BQ7Z745 1585 aa0.89□□□□□ -2.27
GABRB3-223ENST00000637293 KRTAP9-6A8MVA2 160 aa0.89□□□□□ -2.27
GABRB3-223ENST00000637293 KRTAP10-4P60372 401 aaPredicted RBP0.89□□□□□ -2.27
GABRB3-223ENST00000637293 TFF3Q07654 80 aa0.89□□□□□ -2.27
GABRB3-223ENST00000637293 ZNF462Q96JM2 2506 aa0.89□□□□□ -2.27
GABRB3-223ENST00000637293 SPTBN2O15020 2390 aa0.89□□□□□ -2.27
GABRB3-223ENST00000637293 WNK2Q9Y3S1 2297 aa0.89□□□□□ -2.27
GABRB3-223ENST00000637293 RPS27P42677 84 aaKnown RBP0.88□□□□□ -2.27
GABRB3-223ENST00000637293 RPS27LQ71UM5 84 aaKnown RBP0.88□□□□□ -2.27
GABRB3-223ENST00000637293 CLTCL1P53675 1640 aa0.88□□□□□ -2.27
GABRB3-223ENST00000637293 WT1-ASQ06250 92 aa0.87□□□□□ -2.27
GABRB3-223ENST00000637293 KLK9Q2XQG4 91 aa0.87□□□□□ -2.27
GABRB3-223ENST00000637293 KRTAP5-2Q701N4 177 aa0.87□□□□□ -2.27
GABRB3-223ENST00000637293 MEGF8Q7Z7M0 2845 aa0.86□□□□□ -2.27
GABRB3-223ENST00000637293 CACNA1HO95180 2353 aa0.86□□□□□ -2.27
GABRB3-223ENST00000637293 PKDREJQ9NTG1 2253 aa0.86□□□□□ -2.27
GABRB3-223ENST00000637293 DEFB109BQ30KR1 87 aa0.85□□□□□ -2.27
GABRB3-223ENST00000637293 WFDC10BQ8IUB3 73 aa0.85□□□□□ -2.27
GABRB3-223ENST00000637293 ZNF292O60281 2723 aa0.84□□□□□ -2.27
GABRB3-223ENST00000637293 DEFB131AP59861 70 aa0.84□□□□□ -2.27
GABRB3-223ENST00000637293 SPTBN1Q01082 2364 aaKnown RBP0.84□□□□□ -2.28
GABRB3-223ENST00000637293 HMCN1Q96RW7 5635 aa0.83□□□□□ -2.28
GABRB3-223ENST00000637293 IGLV5-48A0A075B6I7 105 aa0.83□□□□□ -2.28
GABRB3-223ENST00000637293 KRTAP4-3Q9BYR4 195 aa0.83□□□□□ -2.28
GABRB3-223ENST00000637293 TTC28Q96AY4 2481 aa0.83□□□□□ -2.28
GABRB3-223ENST00000637293 POLQO75417 2590 aa0.83□□□□□ -2.28
GABRB3-223ENST00000637293 TPRP12270 2363 aaKnown RBP0.83□□□□□ -2.28
GABRB3-223ENST00000637293 KAAG1Q9UBP8 84 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms