RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 MRPL55Q7Z7F7 128 aaKnown RBP5.29□□□□□ -1.56
CACNA1A-236ENST00000637117 BOD1L2Q8IYS8 172 aa5.29□□□□□ -1.56
CACNA1A-236ENST00000637117 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
CACNA1A-236ENST00000637117 TP73-AS1Q9UF72 201 aa5.29□□□□□ -1.56
CACNA1A-236ENST00000637117 PYGO1Q9Y3Y4 419 aa5.29□□□□□ -1.56
CACNA1A-236ENST00000637117 IGKCP01834 107 aa5.28□□□□□ -1.56
CACNA1A-236ENST00000637117 PLNP26678 52 aa5.28□□□□□ -1.56
CACNA1A-236ENST00000637117 CKS1BP61024 79 aa5.28□□□□□ -1.56
CACNA1A-236ENST00000637117 C6orf226Q5I0X4 101 aa5.28□□□□□ -1.56
CACNA1A-236ENST00000637117 C2orf91Q6ZV80 131 aa5.28□□□□□ -1.56
CACNA1A-236ENST00000637117 TOMM7Q9P0U1 55 aa5.28□□□□□ -1.56
CACNA1A-236ENST00000637117 IGLV4-3A0A075B6K6 122 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 RPL37AP8A6NKH3 93 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 F8VRH5 84 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 BATFQ16520 125 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 FAM229BQ4G0N7 80 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 ADAMTSL4-AS1Q5T5F5 129 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 C2orf66Q6UXQ4 117 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 ERASQ7Z444 233 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 TMEM141Q96I45 108 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 LINC00167Q96N53 147 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 SCGB3A1Q96QR1 104 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 PPDPFQ9H3Y8 114 aa5.27□□□□□ -1.57
CACNA1A-236ENST00000637117 IGKV2D-26A0A0A0MRZ7 120 aa5.26□□□□□ -1.57
CACNA1A-236ENST00000637117 HINT1P49773 126 aaPredicted RBP5.26□□□□□ -1.57
CACNA1A-236ENST00000637117 BVES-AS1Q5T3Y7 98 aa5.26□□□□□ -1.57
CACNA1A-236ENST00000637117 TIMM17AQ99595 171 aa5.26□□□□□ -1.57
CACNA1A-236ENST00000637117 HIGD1BQ9P298 99 aa5.26□□□□□ -1.57
CACNA1A-236ENST00000637117 CYSLTR1Q9Y271 337 aa5.26□□□□□ -1.57
CACNA1A-236ENST00000637117 UBE2AP49459 152 aa5.25□□□□□ -1.57
CACNA1A-236ENST00000637117 SEC11AP67812 179 aa5.25□□□□□ -1.57
CACNA1A-236ENST00000637117 HSD52Q0P140 79 aa5.25□□□□□ -1.57
CACNA1A-236ENST00000637117 KRTAP13-1Q8IUC0 172 aa5.25□□□□□ -1.57
CACNA1A-236ENST00000637117 Q8IZM0 81 aa5.25□□□□□ -1.57
CACNA1A-236ENST00000637117 IGIPA6NJ69 53 aa5.24□□□□□ -1.57
CACNA1A-236ENST00000637117 ZC2HC1BQ5TFG8 222 aa5.24□□□□□ -1.57
CACNA1A-236ENST00000637117 CHTOPQ9Y3Y2 248 aaKnown RBP5.24□□□□□ -1.57
CACNA1A-236ENST00000637117 NMUP48645 174 aa5.23□□□□□ -1.57
CACNA1A-236ENST00000637117 PCP2Q8IVA1 136 aa5.23□□□□□ -1.57
CACNA1A-236ENST00000637117 LINC00337Q8N6G1 96 aa5.23□□□□□ -1.57
CACNA1A-236ENST00000637117 VCX2Q9H322 139 aa5.23□□□□□ -1.57
CACNA1A-236ENST00000637117 PMVKQ15126 192 aa5.22□□□□□ -1.57
CACNA1A-236ENST00000637117 ASB16-AS1Q495Z4 193 aa5.22□□□□□ -1.57
CACNA1A-236ENST00000637117 NOTCH2NLQ7Z3S9 236 aa5.22□□□□□ -1.57
CACNA1A-236ENST00000637117 AMELXQ99217 191 aa5.22□□□□□ -1.57
CACNA1A-236ENST00000637117 LITAFQ99732 161 aa5.22□□□□□ -1.57
CACNA1A-236ENST00000637117 CST9LQ9H4G1 147 aa5.22□□□□□ -1.57
CACNA1A-236ENST00000637117 A6NDN8 102 aa5.21□□□□□ -1.58
CACNA1A-236ENST00000637117 E9PLD3 99 aa5.21□□□□□ -1.58
CACNA1A-236ENST00000637117 TAX1BP3O14907 124 aa5.21□□□□□ -1.58
CACNA1A-236ENST00000637117 TAL2Q16559 108 aa5.21□□□□□ -1.58
CACNA1A-236ENST00000637117 FAM19A3Q7Z5A8 133 aa5.21□□□□□ -1.58
CACNA1A-236ENST00000637117 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.58
CACNA1A-236ENST00000637117 C11orf86A6NJI1 115 aa5.2□□□□□ -1.58
CACNA1A-236ENST00000637117 K7ERU9 68 aa5.2□□□□□ -1.58
CACNA1A-236ENST00000637117 CXCL5P42830 114 aa5.2□□□□□ -1.58
CACNA1A-236ENST00000637117 HERVK_113P61574 105 aa5.2□□□□□ -1.58
CACNA1A-236ENST00000637117 HERVK_113P63121 156 aa5.2□□□□□ -1.58
CACNA1A-236ENST00000637117 SPAG11AQ6PDA7 123 aa5.2□□□□□ -1.58
CACNA1A-236ENST00000637117 FP248Q71RG6 208 aaPredicted RBP5.2□□□□□ -1.58
CACNA1A-236ENST00000637117 C3orf22Q8N5N4 141 aa5.2□□□□□ -1.58
CACNA1A-236ENST00000637117 CDKN2A-AS1Q9UH64 79 aa5.2□□□□□ -1.58
CACNA1A-236ENST00000637117 MYMXA0A1B0GTQ4 84 aa5.19□□□□□ -1.58
CACNA1A-236ENST00000637117 H3BRM9 83 aa5.19□□□□□ -1.58
CACNA1A-236ENST00000637117 CFC1BP0CG36 223 aa5.19□□□□□ -1.58
CACNA1A-236ENST00000637117 CFC1P0CG37 223 aa5.19□□□□□ -1.58
CACNA1A-236ENST00000637117 PRLHP81277 87 aa5.19□□□□□ -1.58
CACNA1A-236ENST00000637117 KRTAP13-3Q3SY46 172 aa5.19□□□□□ -1.58
CACNA1A-236ENST00000637117 NKAPP1Q8N9T2 125 aa5.19□□□□□ -1.58
CACNA1A-236ENST00000637117 IGKV2-28A0A075B6P5 120 aa5.18□□□□□ -1.58
CACNA1A-236ENST00000637117 IGKV2D-28P01615 120 aa5.18□□□□□ -1.58
CACNA1A-236ENST00000637117 FAM19A1Q7Z5A9 133 aa5.18□□□□□ -1.58
CACNA1A-236ENST00000637117 PLEKHB2Q96CS7 222 aa5.18□□□□□ -1.58
CACNA1A-236ENST00000637117 GEMIN7Q9H840 131 aaKnown RBP5.18□□□□□ -1.58
CACNA1A-236ENST00000637117 CEND1Q8N111 149 aa5.16□□□□□ -1.58
CACNA1A-236ENST00000637117 COX7B2Q8TF08 81 aa5.16□□□□□ -1.58
CACNA1A-236ENST00000637117 TTTY13Q9BZ97 58 aa5.16□□□□□ -1.58
CACNA1A-236ENST00000637117 A0A1B0GWB2 263 aa5.15□□□□□ -1.59
CACNA1A-236ENST00000637117 TMEM223A0PJW6 202 aa5.15□□□□□ -1.59
CACNA1A-236ENST00000637117 ZNF815PA8K554 130 aa5.15□□□□□ -1.59
CACNA1A-236ENST00000637117 TMEM238C9JI98 176 aa5.15□□□□□ -1.59
CACNA1A-236ENST00000637117 VAMP3Q15836 100 aa5.15□□□□□ -1.59
CACNA1A-236ENST00000637117 Q6ZVH6 145 aa5.15□□□□□ -1.59
CACNA1A-236ENST00000637117 GTF2H5Q6ZYL4 71 aa5.15□□□□□ -1.59
CACNA1A-236ENST00000637117 VPS25Q9BRG1 176 aa5.15□□□□□ -1.59
CACNA1A-236ENST00000637117 TMEM126AQ9H061 195 aa5.15□□□□□ -1.59
CACNA1A-236ENST00000637117 TINCRA0A1B0GVN0 87 aa5.14□□□□□ -1.59
CACNA1A-236ENST00000637117 M0R378 163 aa5.14□□□□□ -1.59
CACNA1A-236ENST00000637117 LEPROTO15243 131 aa5.14□□□□□ -1.59
CACNA1A-236ENST00000637117 SMIM13P0DJ93 91 aa5.14□□□□□ -1.59
CACNA1A-236ENST00000637117 ZNF22P17026 224 aaPredicted RBP5.14□□□□□ -1.59
CACNA1A-236ENST00000637117 FXYD2P54710 66 aa5.14□□□□□ -1.59
CACNA1A-236ENST00000637117 TMEM170BQ5T4T1 132 aa5.14□□□□□ -1.59
CACNA1A-236ENST00000637117 LCE1AQ5T7P2 110 aa5.14□□□□□ -1.59
CACNA1A-236ENST00000637117 SPANXB1Q9NS25 103 aaPredicted RBP5.14□□□□□ -1.59
CACNA1A-236ENST00000637117 J3QQQ9 107 aa5.13□□□□□ -1.59
CACNA1A-236ENST00000637117 SCGB1A1P11684 91 aa5.13□□□□□ -1.59
CACNA1A-236ENST00000637117 LGALS3P17931 250 aaKnown RBP5.13□□□□□ -1.59
CACNA1A-236ENST00000637117 HIST1H4GQ99525 98 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms