RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 LGALS3P17931 250 aaKnown RBP8.71□□□□□ -1.02
CACNA1A-230ENST00000636768 LINC00337Q8N6G1 96 aa8.71□□□□□ -1.02
CACNA1A-230ENST00000636768 NMUP48645 174 aa8.7□□□□□ -1.02
CACNA1A-230ENST00000636768 SNHG12Q9BXW3 62 aa8.7□□□□□ -1.02
CACNA1A-230ENST00000636768 A0A1B0GV90 55 aa8.69□□□□□ -1.02
CACNA1A-230ENST00000636768 HSBP1L1C9JCN9 74 aa8.69□□□□□ -1.02
CACNA1A-230ENST00000636768 SPRR1AP35321 89 aa8.69□□□□□ -1.02
CACNA1A-230ENST00000636768 LOC107984156A0A0G2JMH3 177 aa8.67□□□□□ -1.02
CACNA1A-230ENST00000636768 KRTAP4-16G5E9R7 235 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-230ENST00000636768 ARL17AQ8IVW1 177 aa8.67□□□□□ -1.02
CACNA1A-230ENST00000636768 SMCR5Q8TEV8 140 aa8.67□□□□□ -1.02
CACNA1A-230ENST00000636768 TRBV10-2A0A0K0K1G8 114 aa8.66□□□□□ -1.02
CACNA1A-230ENST00000636768 PPDPFQ9H3Y8 114 aa8.66□□□□□ -1.02
CACNA1A-230ENST00000636768 SPANXB1Q9NS25 103 aaPredicted RBP8.66□□□□□ -1.02
CACNA1A-230ENST00000636768 C4orf48Q5BLP8 95 aa8.65□□□□□ -1.02
CACNA1A-230ENST00000636768 LINC01545Q5VT33 79 aa8.65□□□□□ -1.02
CACNA1A-230ENST00000636768 SPAG11AQ6PDA7 123 aa8.65□□□□□ -1.02
CACNA1A-230ENST00000636768 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
CACNA1A-230ENST00000636768 IGLV7-46A0A075B6I9 117 aa8.64□□□□□ -1.03
CACNA1A-230ENST00000636768 COL5A1-AS1Q5SY13 56 aa8.64□□□□□ -1.03
CACNA1A-230ENST00000636768 S100A7L2Q5SY68 101 aa8.64□□□□□ -1.03
CACNA1A-230ENST00000636768 B5MCH6 92 aa8.63□□□□□ -1.03
CACNA1A-230ENST00000636768 NPC2P61916 151 aa8.63□□□□□ -1.03
CACNA1A-230ENST00000636768 A0A0J9YXY3 114 aa8.62□□□□□ -1.03
CACNA1A-230ENST00000636768 E9PLD3 99 aa8.62□□□□□ -1.03
CACNA1A-230ENST00000636768 NDUFC2O95298 119 aa8.62□□□□□ -1.03
CACNA1A-230ENST00000636768 GAGE2AQ6NT46 116 aa8.62□□□□□ -1.03
CACNA1A-230ENST00000636768 Q8NBF4 154 aa8.62□□□□□ -1.03
CACNA1A-230ENST00000636768 CDIP1Q9H305 208 aa8.62□□□□□ -1.03
CACNA1A-230ENST00000636768 TPRXLQ17RH7 258 aa8.61□□□□□ -1.03
CACNA1A-230ENST00000636768 SLC25A34Q6PIV7 304 aa8.61□□□□□ -1.03
CACNA1A-230ENST00000636768 TRAV23DV6A0A075B6W5 121 aa8.6□□□□□ -1.03
CACNA1A-230ENST00000636768 IGLV6-57P01721 117 aa8.6□□□□□ -1.03
CACNA1A-230ENST00000636768 BATFQ16520 125 aa8.6□□□□□ -1.03
CACNA1A-230ENST00000636768 LINC00483Q53H64 154 aa8.6□□□□□ -1.03
CACNA1A-230ENST00000636768 Q6ZRX8 168 aa8.6□□□□□ -1.03
CACNA1A-230ENST00000636768 A0A0U1RQV1 116 aa8.59□□□□□ -1.03
CACNA1A-230ENST00000636768 ERC2-IT1O76042 136 aa8.59□□□□□ -1.03
CACNA1A-230ENST00000636768 ADAMTSL4-AS1Q5T5F5 129 aa8.59□□□□□ -1.03
CACNA1A-230ENST00000636768 SOSTDC1Q6X4U4 206 aa8.59□□□□□ -1.03
CACNA1A-230ENST00000636768 Q9BRP9 147 aa8.59□□□□□ -1.03
CACNA1A-230ENST00000636768 IGLV9-49A0A0B4J1Y8 123 aa8.58□□□□□ -1.04
CACNA1A-230ENST00000636768 EIF4EBP3O60516 100 aaPredicted RBP8.57□□□□□ -1.04
CACNA1A-230ENST00000636768 MOBPQ13875 183 aa8.57□□□□□ -1.04
CACNA1A-230ENST00000636768 ZNF73O43830 326 aaPredicted RBP8.56□□□□□ -1.04
CACNA1A-230ENST00000636768 SPINK1P00995 79 aa8.56□□□□□ -1.04
CACNA1A-230ENST00000636768 COX8AP10176 69 aa8.56□□□□□ -1.04
CACNA1A-230ENST00000636768 CBY1Q9Y3M2 126 aa8.56□□□□□ -1.04
CACNA1A-230ENST00000636768 HINT1P49773 126 aaPredicted RBP8.55□□□□□ -1.04
CACNA1A-230ENST00000636768 FP248Q71RG6 208 aaPredicted RBP8.55□□□□□ -1.04
CACNA1A-230ENST00000636768 ZNF815PA8K554 130 aa8.54□□□□□ -1.04
CACNA1A-230ENST00000636768 DLEU1O43261 78 aa8.54□□□□□ -1.04
CACNA1A-230ENST00000636768 OR13C6PQ8NH95 151 aa8.54□□□□□ -1.04
CACNA1A-230ENST00000636768 LINC00308Q8TCZ7 52 aa8.54□□□□□ -1.04
CACNA1A-230ENST00000636768 SPANXCQ9NY87 97 aa8.54□□□□□ -1.04
CACNA1A-230ENST00000636768 TIMM17BO60830 172 aa8.53□□□□□ -1.04
CACNA1A-230ENST00000636768 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
CACNA1A-230ENST00000636768 LITAFQ99732 161 aa8.53□□□□□ -1.04
CACNA1A-230ENST00000636768 MUC2Q02817 5179 aa8.53□□□□□ -1.04
CACNA1A-230ENST00000636768 C9orf153Q5TBE3 101 aa8.51□□□□□ -1.05
CACNA1A-230ENST00000636768 ANKRD39Q53RE8 183 aa8.5□□□□□ -1.05
CACNA1A-230ENST00000636768 BVES-AS1Q5T3Y7 98 aa8.5□□□□□ -1.05
CACNA1A-230ENST00000636768 TTTY13Q9BZ97 58 aa8.5□□□□□ -1.05
CACNA1A-230ENST00000636768 ST20-AS1Q8NBB2 130 aa8.49□□□□□ -1.05
CACNA1A-230ENST00000636768 SPANXDQ9BXN6 97 aa8.49□□□□□ -1.05
CACNA1A-230ENST00000636768 RPS29P62273 56 aaKnown RBP8.48□□□□□ -1.05
CACNA1A-230ENST00000636768 HSD52Q0P140 79 aa8.47□□□□□ -1.05
CACNA1A-230ENST00000636768 SCGB1D4Q6XE38 83 aa8.47□□□□□ -1.05
CACNA1A-230ENST00000636768 C2orf91Q6ZV80 131 aa8.47□□□□□ -1.05
CACNA1A-230ENST00000636768 KRTAP13-3Q3SY46 172 aa8.46□□□□□ -1.06
CACNA1A-230ENST00000636768 DHRS4-AS1Q9P1J3 65 aa8.46□□□□□ -1.06
CACNA1A-230ENST00000636768 A6NDN8 102 aa8.45□□□□□ -1.06
CACNA1A-230ENST00000636768 SLC25A20O43772 301 aa8.45□□□□□ -1.06
CACNA1A-230ENST00000636768 Q8N377 158 aa8.45□□□□□ -1.06
CACNA1A-230ENST00000636768 HIGD1BQ9P298 99 aa8.45□□□□□ -1.06
CACNA1A-230ENST00000636768 COX7BP24311 80 aa8.44□□□□□ -1.06
CACNA1A-230ENST00000636768 UBE2V1Q13404 147 aa8.43□□□□□ -1.06
CACNA1A-230ENST00000636768 C6orf99Q4VX62 202 aa8.43□□□□□ -1.06
CACNA1A-230ENST00000636768 COPS9Q8WXC6 57 aa8.43□□□□□ -1.06
CACNA1A-230ENST00000636768 TAX1BP3O14907 124 aa8.42□□□□□ -1.06
CACNA1A-230ENST00000636768 ELOF1P60002 83 aaKnown RBP8.42□□□□□ -1.06
CACNA1A-230ENST00000636768 VAMP3Q15836 100 aa8.41□□□□□ -1.06
CACNA1A-230ENST00000636768 PCP2Q8IVA1 136 aa8.41□□□□□ -1.06
CACNA1A-230ENST00000636768 SPRR1BP22528 89 aa8.4□□□□□ -1.06
CACNA1A-230ENST00000636768 LAMTOR3Q9UHA4 124 aa8.4□□□□□ -1.06
CACNA1A-230ENST00000636768 IFITM1P13164 125 aa8.39□□□□□ -1.07
CACNA1A-230ENST00000636768 TAL2Q16559 108 aa8.39□□□□□ -1.07
CACNA1A-230ENST00000636768 Q6ZVH6 145 aa8.38□□□□□ -1.07
CACNA1A-230ENST00000636768 ASB16-AS1Q495Z4 193 aa8.37□□□□□ -1.07
CACNA1A-230ENST00000636768 HRCT1Q6UXD1 115 aa8.37□□□□□ -1.07
CACNA1A-230ENST00000636768 DEFB105AQ8NG35 78 aa8.37□□□□□ -1.07
CACNA1A-230ENST00000636768 MUC17Q685J3 4493 aa8.36□□□□□ -1.07
CACNA1A-230ENST00000636768 TRBV7-6A0A0J9YX20 115 aa8.36□□□□□ -1.07
CACNA1A-230ENST00000636768 C9orf118A6NHY6 69 aa8.36□□□□□ -1.07
CACNA1A-230ENST00000636768 SEC61BP60468 96 aaKnown RBP8.36□□□□□ -1.07
CACNA1A-230ENST00000636768 Q1RN00 199 aa8.36□□□□□ -1.07
CACNA1A-230ENST00000636768 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
CACNA1A-230ENST00000636768 LIMD2Q9BT23 127 aa8.36□□□□□ -1.07
CACNA1A-230ENST00000636768 A0A1B0GWB2 263 aa8.35□□□□□ -1.07
CACNA1A-230ENST00000636768 LCE2AQ5TA79 106 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms