RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 IGLV1-51P01701 117 aa3.76□□□□□ -1.81
SCN2A-212ENST00000636662 A0A1B0GU33 70 aa3.75□□□□□ -1.81
SCN2A-212ENST00000636662 ZNF462Q96JM2 2506 aa3.75□□□□□ -1.81
SCN2A-212ENST00000636662 HIVEP3Q5T1R4 2406 aa3.75□□□□□ -1.81
SCN2A-212ENST00000636662 SEC61BP60468 96 aaKnown RBP3.75□□□□□ -1.81
SCN2A-212ENST00000636662 CYSTM1Q9H1C7 97 aa3.75□□□□□ -1.81
SCN2A-212ENST00000636662 C16orf90A8MZG2 172 aa3.74□□□□□ -1.81
SCN2A-212ENST00000636662 SPRR4Q96PI1 79 aa3.73□□□□□ -1.81
SCN2A-212ENST00000636662 FAM229BQ4G0N7 80 aa3.73□□□□□ -1.81
SCN2A-212ENST00000636662 PRR26Q8N8Z3 221 aa3.73□□□□□ -1.81
SCN2A-212ENST00000636662 ODF3L2Q3SX64 289 aa3.73□□□□□ -1.81
SCN2A-212ENST00000636662 Q8NA96 180 aa3.72□□□□□ -1.81
SCN2A-212ENST00000636662 HIVEP2P31629 2446 aa3.72□□□□□ -1.81
SCN2A-212ENST00000636662 ROMO1P60602 79 aa3.72□□□□□ -1.81
SCN2A-212ENST00000636662 DNAH10OSP0CZ25 163 aa3.71□□□□□ -1.82
SCN2A-212ENST00000636662 A0A1B0GVX0 72 aa3.71□□□□□ -1.82
SCN2A-212ENST00000636662 A6NN06 94 aa3.7□□□□□ -1.82
SCN2A-212ENST00000636662 Q8NAQ8 132 aa3.69□□□□□ -1.82
SCN2A-212ENST00000636662 IGFL1Q6UW32 110 aa3.68□□□□□ -1.82
SCN2A-212ENST00000636662 CCDC168Q8NDH2 2452 aa3.67□□□□□ -1.82
SCN2A-212ENST00000636662 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
SCN2A-212ENST00000636662 Q8N377 158 aa3.67□□□□□ -1.82
SCN2A-212ENST00000636662 A0A0G2JQZ4 141 aa3.67□□□□□ -1.82
SCN2A-212ENST00000636662 A0A1W2PNN7 141 aa3.67□□□□□ -1.82
SCN2A-212ENST00000636662 FAM168BA1KXE4 195 aa3.67□□□□□ -1.82
SCN2A-212ENST00000636662 ACACBO00763 2458 aa3.66□□□□□ -1.82
SCN2A-212ENST00000636662 LCE6AA0A183 80 aa3.66□□□□□ -1.82
SCN2A-212ENST00000636662 C15orf56Q8N910 161 aa3.66□□□□□ -1.82
SCN2A-212ENST00000636662 J3QL48 77 aa3.66□□□□□ -1.82
SCN2A-212ENST00000636662 TLN1Q9Y490 2541 aaKnown RBP3.65□□□□□ -1.82
SCN2A-212ENST00000636662 PRR34Q9NV39 138 aa3.65□□□□□ -1.82
SCN2A-212ENST00000636662 C20orf166-AS1Q96NR2 134 aa3.65□□□□□ -1.83
SCN2A-212ENST00000636662 A0A1W2PNU3 283 aaPredicted RBP3.65□□□□□ -1.83
SCN2A-212ENST00000636662 IGLV1-50A0A075B6I6 118 aa3.64□□□□□ -1.83
SCN2A-212ENST00000636662 WDR87Q6ZQQ6 2873 aa3.64□□□□□ -1.83
SCN2A-212ENST00000636662 ZCCHC13Q8WW36 166 aaKnown RBP3.64□□□□□ -1.83
SCN2A-212ENST00000636662 NCOR2Q9Y618 2525 aa3.63□□□□□ -1.83
SCN2A-212ENST00000636662 PKD1L2Q7Z442 2459 aa3.63□□□□□ -1.83
SCN2A-212ENST00000636662 LINC00304Q8N9R0 145 aa3.63□□□□□ -1.83
SCN2A-212ENST00000636662 HRES1P13985 223 aa3.62□□□□□ -1.83
SCN2A-212ENST00000636662 TLN2Q9Y4G6 2542 aa3.62□□□□□ -1.83
SCN2A-212ENST00000636662 FN1P02751 2386 aaKnown RBP3.61□□□□□ -1.83
SCN2A-212ENST00000636662 A0A1W2PNM2 257 aa3.61□□□□□ -1.83
SCN2A-212ENST00000636662 NOTCH2NLQ7Z3S9 236 aa3.61□□□□□ -1.83
SCN2A-212ENST00000636662 LINC00612Q8N6U2 182 aa3.61□□□□□ -1.83
SCN2A-212ENST00000636662 M0R2T5 61 aa3.6□□□□□ -1.83
SCN2A-212ENST00000636662 C19orf73Q9NVV2 129 aa3.6□□□□□ -1.83
SCN2A-212ENST00000636662 TNP2Q05952 138 aa3.6□□□□□ -1.83
SCN2A-212ENST00000636662 ANAPC11Q9NYG5 84 aa3.6□□□□□ -1.83
SCN2A-212ENST00000636662 A0A096LNT2 108 aa3.59□□□□□ -1.83
SCN2A-212ENST00000636662 SPATA8Q6RVD6 105 aa3.59□□□□□ -1.83
SCN2A-212ENST00000636662 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.59□□□□□ -1.83
SCN2A-212ENST00000636662 CNBPP62633 177 aaKnown RBP3.58□□□□□ -1.84
SCN2A-212ENST00000636662 S4R3F8 94 aa3.58□□□□□ -1.84
SCN2A-212ENST00000636662 RPL37P61927 97 aaKnown RBP3.57□□□□□ -1.84
SCN2A-212ENST00000636662 R4GN34 69 aa3.57□□□□□ -1.84
SCN2A-212ENST00000636662 Q6ZR54 194 aa3.56□□□□□ -1.84
SCN2A-212ENST00000636662 MYO18BQ8IUG5 2567 aa3.55□□□□□ -1.84
SCN2A-212ENST00000636662 Q6ZSA8 131 aa3.55□□□□□ -1.84
SCN2A-212ENST00000636662 ZNF861PO60384 105 aa3.54□□□□□ -1.84
SCN2A-212ENST00000636662 SMR3AQ99954 134 aa3.54□□□□□ -1.84
SCN2A-212ENST00000636662 SPRR1AP35321 89 aa3.54□□□□□ -1.84
SCN2A-212ENST00000636662 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
SCN2A-212ENST00000636662 LRRK2Q5S007 2527 aa3.53□□□□□ -1.84
SCN2A-212ENST00000636662 POLQO75417 2590 aa3.53□□□□□ -1.85
SCN2A-212ENST00000636662 BPTFQ12830 3046 aa3.52□□□□□ -1.85
SCN2A-212ENST00000636662 NOTCH2Q04721 2471 aa3.52□□□□□ -1.85
SCN2A-212ENST00000636662 Q8NDZ9 215 aa3.52□□□□□ -1.85
SCN2A-212ENST00000636662 SPRR1BP22528 89 aa3.52□□□□□ -1.85
SCN2A-212ENST00000636662 MMP24-AS1A0A0U1RRL7 71 aa3.52□□□□□ -1.85
SCN2A-212ENST00000636662 ANKRD17O75179 2603 aaKnown RBP3.51□□□□□ -1.85
SCN2A-212ENST00000636662 CACNA1AO00555 2505 aa3.51□□□□□ -1.85
SCN2A-212ENST00000636662 NBDYA0A0U1RRE5 68 aa3.51□□□□□ -1.85
SCN2A-212ENST00000636662 SMR3BP02814 79 aaPredicted RBP3.51□□□□□ -1.85
SCN2A-212ENST00000636662 LINC00472Q9H8W2 130 aa3.5□□□□□ -1.85
SCN2A-212ENST00000636662 NAV2Q8IVL1 2488 aa3.49□□□□□ -1.85
SCN2A-212ENST00000636662 KRTAP29-1A8MX34 341 aaPredicted RBP3.49□□□□□ -1.85
SCN2A-212ENST00000636662 C10orf95Q9H7T3 257 aa3.49□□□□□ -1.85
SCN2A-212ENST00000636662 M0QZ58 72 aa3.48□□□□□ -1.85
SCN2A-212ENST00000636662 ADM2Q7Z4H4 148 aa3.48□□□□□ -1.85
SCN2A-212ENST00000636662 ABCA12Q86UK0 2595 aa3.48□□□□□ -1.85
SCN2A-212ENST00000636662 USP9XQ93008 2570 aaPredicted RBP3.46□□□□□ -1.86
SCN2A-212ENST00000636662 EPG5Q9HCE0 2579 aa3.45□□□□□ -1.86
SCN2A-212ENST00000636662 MUC6Q6W4X9 2439 aa3.45□□□□□ -1.86
SCN2A-212ENST00000636662 GIG44P09565 113 aaPredicted RBP3.45□□□□□ -1.86
SCN2A-212ENST00000636662 PIEZO2Q9H5I5 2752 aa3.44□□□□□ -1.86
SCN2A-212ENST00000636662 DMBT1Q9UGM3 2413 aaPredicted RBP3.44□□□□□ -1.86
SCN2A-212ENST00000636662 CHD8Q9HCK8 2581 aa3.44□□□□□ -1.86
SCN2A-212ENST00000636662 ZFYVE26Q68DK2 2539 aa3.43□□□□□ -1.86
SCN2A-212ENST00000636662 MTORP42345 2549 aa3.43□□□□□ -1.86
SCN2A-212ENST00000636662 JMJD1CQ15652 2540 aa3.43□□□□□ -1.86
SCN2A-212ENST00000636662 Q5W150 140 aa3.42□□□□□ -1.86
SCN2A-212ENST00000636662 USP9YO00507 2555 aaPredicted RBP3.4□□□□□ -1.87
SCN2A-212ENST00000636662 PLAC8Q9NZF1 115 aa3.4□□□□□ -1.87
SCN2A-212ENST00000636662 A0A1W2PPR1 153 aa3.39□□□□□ -1.87
SCN2A-212ENST00000636662 KRTAP4-16G5E9R7 235 aaPredicted RBP3.39□□□□□ -1.87
SCN2A-212ENST00000636662 SETD2Q9BYW2 2564 aaPredicted RBP3.38□□□□□ -1.87
SCN2A-212ENST00000636662 A8MU10 97 aa3.38□□□□□ -1.87
SCN2A-212ENST00000636662 CEP295Q9C0D2 2601 aa3.38□□□□□ -1.87
SCN2A-212ENST00000636662 KRTAP26-1Q6PEX3 210 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms