RNA–Protein interactions for RNA: ENST00000635835.1

CACNB4-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,807 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-215	ENST00000635835	BDP1	A6H8Y1	2624 aa		4.78	□□□□□ -1.64
CACNB4-215	ENST00000635835	ICE1	Q9Y2F5	2266 aa		4.78	□□□□□ -1.64
CACNB4-215	ENST00000635835	LYNX1	G3V0Z9	82 aa		4.78	□□□□□ -1.64
CACNB4-215	ENST00000635835		A0A087WTM6	91 aa		4.77	□□□□□ -1.65
CACNB4-215	ENST00000635835	MMP24-AS1	A0A0U1RRL7	71 aa		4.77	□□□□□ -1.65
CACNB4-215	ENST00000635835	LYNX1	P0DP58	116 aa		4.77	□□□□□ -1.65
CACNB4-215	ENST00000635835	PLA2G2D	Q9UNK4	145 aa		4.77	□□□□□ -1.65
CACNB4-215	ENST00000635835	SPTBN1	Q01082	2364 aa	Known RBP	4.77	□□□□□ -1.65
CACNB4-215	ENST00000635835	FAM168B	A1KXE4	195 aa		4.76	□□□□□ -1.65
CACNB4-215	ENST00000635835	LINC00304	Q8N9R0	145 aa		4.76	□□□□□ -1.65
CACNB4-215	ENST00000635835	C6orf48	Q9UBA6	75 aa		4.76	□□□□□ -1.65
CACNB4-215	ENST00000635835	DEFB131A	P59861	70 aa		4.76	□□□□□ -1.65
CACNB4-215	ENST00000635835	RPL37A	P61513	92 aa	Known RBP	4.76	□□□□□ -1.65
CACNB4-215	ENST00000635835	CLPSL2	Q6UWE3	100 aa		4.76	□□□□□ -1.65
CACNB4-215	ENST00000635835	CACNA1H	O95180	2353 aa		4.76	□□□□□ -1.65
CACNB4-215	ENST00000635835	FAM186A	A6NE01	2351 aa		4.75	□□□□□ -1.65
CACNB4-215	ENST00000635835	ALMS1	Q8TCU4	4167 aa		4.75	□□□□□ -1.65
CACNB4-215	ENST00000635835	IGLV8-61	A0A075B6I0	122 aa		4.75	□□□□□ -1.65
CACNB4-215	ENST00000635835	SPINT4	Q6UDR6	99 aa		4.75	□□□□□ -1.65
CACNB4-215	ENST00000635835	CCL19	Q99731	98 aa		4.74	□□□□□ -1.65
CACNB4-215	ENST00000635835	ZZEF1	O43149	2961 aa		4.74	□□□□□ -1.65
CACNB4-215	ENST00000635835	CELSR3	Q9NYQ7	3312 aa		4.74	□□□□□ -1.65
CACNB4-215	ENST00000635835	PKD1L2	Q7Z442	2459 aa		4.73	□□□□□ -1.65
CACNB4-215	ENST00000635835		Q6ZRX8	168 aa		4.73	□□□□□ -1.65
CACNB4-215	ENST00000635835	EP300	Q09472	2414 aa	Predicted RBP	4.72	□□□□□ -1.65
CACNB4-215	ENST00000635835	IGFL1	Q6UW32	110 aa		4.72	□□□□□ -1.65
CACNB4-215	ENST00000635835	TTC28	Q96AY4	2481 aa		4.7	□□□□□ -1.66
CACNB4-215	ENST00000635835	WNK1	Q9H4A3	2382 aa		4.7	□□□□□ -1.66
CACNB4-215	ENST00000635835	KRTAP9-8	Q9BYQ0	159 aa		4.69	□□□□□ -1.66
CACNB4-215	ENST00000635835	CNOT1	A5YKK6	2376 aa	Known RBP	4.69	□□□□□ -1.66
CACNB4-215	ENST00000635835	RPL37AP8	A6NKH3	93 aa		4.69	□□□□□ -1.66
CACNB4-215	ENST00000635835	SPRR1A	P35321	89 aa		4.69	□□□□□ -1.66
CACNB4-215	ENST00000635835	LCE2A	Q5TA79	106 aa	Predicted RBP	4.69	□□□□□ -1.66
CACNB4-215	ENST00000635835	KRTAP11-1	Q8IUC1	163 aa		4.69	□□□□□ -1.66
CACNB4-215	ENST00000635835	CIRBP-AS1	Q8TBR5	109 aa		4.69	□□□□□ -1.66
CACNB4-215	ENST00000635835	ANKRD17	O75179	2603 aa	Known RBP	4.68	□□□□□ -1.66
CACNB4-215	ENST00000635835	C16orf74	Q96GX8	76 aa		4.68	□□□□□ -1.66
CACNB4-215	ENST00000635835	NOP10	Q9NPE3	64 aa	Known RBP	4.68	□□□□□ -1.66
CACNB4-215	ENST00000635835	LOC400499	M0QZD8	3231 aa		4.68	□□□□□ -1.66
CACNB4-215	ENST00000635835	CFAP47	Q6ZTR5	3102 aa		4.67	□□□□□ -1.66
CACNB4-215	ENST00000635835	FRY	Q5TBA9	3013 aa		4.67	□□□□□ -1.66
CACNB4-215	ENST00000635835	ZFHX4	Q86UP3	3567 aa		4.67	□□□□□ -1.66
CACNB4-215	ENST00000635835	KMT2B	Q9UMN6	2715 aa	Predicted RBP	4.67	□□□□□ -1.66
CACNB4-215	ENST00000635835		Q96NJ1	140 aa		4.67	□□□□□ -1.66
CACNB4-215	ENST00000635835	DMXL1	Q9Y485	3027 aa		4.65	□□□□□ -1.66
CACNB4-215	ENST00000635835	ZNF292	O60281	2723 aa		4.65	□□□□□ -1.66
CACNB4-215	ENST00000635835	SPEN	Q96T58	3664 aa	Known RBP	4.65	□□□□□ -1.67
CACNB4-215	ENST00000635835	CUL9	Q8IWT3	2517 aa		4.64	□□□□□ -1.67
CACNB4-215	ENST00000635835	BRD3OS	Q6XYD6	125 aa		4.64	□□□□□ -1.67
CACNB4-215	ENST00000635835	RIF1	Q5UIP0	2472 aa	Known RBP	4.64	□□□□□ -1.67
CACNB4-215	ENST00000635835		A0A1B0GVX0	72 aa		4.63	□□□□□ -1.67
CACNB4-215	ENST00000635835	PANO1	I0J062	215 aa		4.63	□□□□□ -1.67
CACNB4-215	ENST00000635835	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.63	□□□□□ -1.67
CACNB4-215	ENST00000635835	LY6G6C	O95867	125 aa		4.62	□□□□□ -1.67
CACNB4-215	ENST00000635835	SSBP3-AS1	Q7Z2R9	100 aa		4.62	□□□□□ -1.67
CACNB4-215	ENST00000635835	AKAP13	Q12802	2813 aa		4.62	□□□□□ -1.67
CACNB4-215	ENST00000635835	BSN	Q9UPA5	3926 aa		4.62	□□□□□ -1.67
CACNB4-215	ENST00000635835	DSP	P15924	2871 aa	Known RBP	4.62	□□□□□ -1.67
CACNB4-215	ENST00000635835	ANAPC11	Q9NYG5	84 aa		4.62	□□□□□ -1.67
CACNB4-215	ENST00000635835	CEP250	Q9BV73	2442 aa		4.61	□□□□□ -1.67
CACNB4-215	ENST00000635835	PRRC2C	Q9Y520	2896 aa	Known RBP	4.61	□□□□□ -1.67
CACNB4-215	ENST00000635835	NBDY	A0A0U1RRE5	68 aa		4.61	□□□□□ -1.67
CACNB4-215	ENST00000635835	MRPL34	Q9BQ48	92 aa	Known RBP	4.61	□□□□□ -1.67
CACNB4-215	ENST00000635835	ASPM	Q8IZT6	3477 aa		4.61	□□□□□ -1.67
CACNB4-215	ENST00000635835	ACACA	Q13085	2346 aa		4.61	□□□□□ -1.67
CACNB4-215	ENST00000635835	KRTAP13-3	Q3SY46	172 aa		4.6	□□□□□ -1.67
CACNB4-215	ENST00000635835	GVINP1	Q7Z2Y8	2422 aa		4.6	□□□□□ -1.67
CACNB4-215	ENST00000635835	APC2	O95996	2303 aa		4.6	□□□□□ -1.67
CACNB4-215	ENST00000635835	CAMK2N1	Q7Z7J9	78 aa		4.6	□□□□□ -1.67
CACNB4-215	ENST00000635835	MUC6	Q6W4X9	2439 aa		4.6	□□□□□ -1.67
CACNB4-215	ENST00000635835	PTPRZ1	P23471	2315 aa	Predicted RBP	4.59	□□□□□ -1.67
CACNB4-215	ENST00000635835	PKDREJ	Q9NTG1	2253 aa		4.59	□□□□□ -1.67
CACNB4-215	ENST00000635835	SPTBN2	O15020	2390 aa		4.59	□□□□□ -1.67
CACNB4-215	ENST00000635835		A0A1W2PPR1	153 aa		4.59	□□□□□ -1.67
CACNB4-215	ENST00000635835	PCNX1	Q96RV3	2341 aa		4.59	□□□□□ -1.67
CACNB4-215	ENST00000635835	KRTAP5-3	Q6L8H2	238 aa		4.58	□□□□□ -1.68
CACNB4-215	ENST00000635835		H3BUX3	64 aa		4.58	□□□□□ -1.68
CACNB4-215	ENST00000635835	LY6E	Q16553	131 aa		4.58	□□□□□ -1.68
CACNB4-215	ENST00000635835	KALRN	O60229	2985 aa		4.57	□□□□□ -1.68
CACNB4-215	ENST00000635835	BOD1L1	Q8NFC6	3051 aa		4.57	□□□□□ -1.68
CACNB4-215	ENST00000635835		H0YAA0	97 aa		4.57	□□□□□ -1.68
CACNB4-215	ENST00000635835	C15orf56	Q8N910	161 aa		4.57	□□□□□ -1.68
CACNB4-215	ENST00000635835	LAMA5	O15230	3695 aa		4.57	□□□□□ -1.68
CACNB4-215	ENST00000635835		A0A0G2JQZ4	141 aa		4.56	□□□□□ -1.68
CACNB4-215	ENST00000635835		A0A1W2PNN7	141 aa		4.56	□□□□□ -1.68
CACNB4-215	ENST00000635835	DEFB136	Q30KP8	78 aa		4.56	□□□□□ -1.68
CACNB4-215	ENST00000635835	KRTAP1-3	Q8IUG1	177 aa		4.56	□□□□□ -1.68
CACNB4-215	ENST00000635835	PRO0255	Q9UI72	69 aa		4.56	□□□□□ -1.68
CACNB4-215	ENST00000635835	PSORS1C2	Q9UIG4	136 aa		4.56	□□□□□ -1.68
CACNB4-215	ENST00000635835	ANKRD11	Q6UB99	2663 aa	Predicted RBP	4.56	□□□□□ -1.68
CACNB4-215	ENST00000635835	ROS1	P08922	2347 aa		4.56	□□□□□ -1.68
CACNB4-215	ENST00000635835	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.55	□□□□□ -1.68
CACNB4-215	ENST00000635835	DMXL2	Q8TDJ6	3036 aa		4.55	□□□□□ -1.68
CACNB4-215	ENST00000635835	ATM	Q13315	3056 aa		4.55	□□□□□ -1.68
CACNB4-215	ENST00000635835	CRIPT	Q9P021	101 aa		4.54	□□□□□ -1.68
CACNB4-215	ENST00000635835	SPRR1B	P22528	89 aa		4.53	□□□□□ -1.68
CACNB4-215	ENST00000635835		Q6ZSA8	131 aa		4.53	□□□□□ -1.68
CACNB4-215	ENST00000635835	DCHS1	Q96JQ0	3298 aa		4.53	□□□□□ -1.68
CACNB4-215	ENST00000635835	PIEZO2	Q9H5I5	2752 aa		4.53	□□□□□ -1.68
CACNB4-215	ENST00000635835	MAP1B	P46821	2468 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms