RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 ANKRD17O75179 2603 aaKnown RBP7.81□□□□□ -1.16
COL11A1-211ENST00000635193 C9orf129Q5T035 196 aaKnown RBP7.8□□□□□ -1.16
COL11A1-211ENST00000635193 LINC00528Q8N1L1 170 aa7.8□□□□□ -1.16
COL11A1-211ENST00000635193 LINC00313P59037 77 aa7.8□□□□□ -1.16
COL11A1-211ENST00000635193 MRPL34Q9BQ48 92 aaKnown RBP7.79□□□□□ -1.16
COL11A1-211ENST00000635193 C16orf90A8MZG2 172 aa7.79□□□□□ -1.16
COL11A1-211ENST00000635193 SPACA4Q8TDM5 124 aa7.79□□□□□ -1.16
COL11A1-211ENST00000635193 FAM168BA1KXE4 195 aa7.77□□□□□ -1.17
COL11A1-211ENST00000635193 KCNQ1DNQ9H478 68 aa7.77□□□□□ -1.17
COL11A1-211ENST00000635193 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
COL11A1-211ENST00000635193 CDC42SE1Q9NRR8 79 aa7.76□□□□□ -1.17
COL11A1-211ENST00000635193 CSNK1G2-AS1Q8NCQ2 148 aa7.76□□□□□ -1.17
COL11A1-211ENST00000635193 IGLV1-50A0A075B6I6 118 aa7.75□□□□□ -1.17
COL11A1-211ENST00000635193 LINC00588Q9Y4M8 146 aa7.75□□□□□ -1.17
COL11A1-211ENST00000635193 IGFL1Q6UW32 110 aa7.74□□□□□ -1.17
COL11A1-211ENST00000635193 PRUNE2Q8WUY3 3088 aa7.73□□□□□ -1.17
COL11A1-211ENST00000635193 Q1T7F1 81 aa7.73□□□□□ -1.17
COL11A1-211ENST00000635193 SPANXA2-OT1Q8N9U9 137 aa7.72□□□□□ -1.17
COL11A1-211ENST00000635193 USP24Q9UPU5 2620 aa7.72□□□□□ -1.17
COL11A1-211ENST00000635193 CHTF8P0CG12 524 aa7.72□□□□□ -1.17
COL11A1-211ENST00000635193 LAMA2P24043 3122 aaKnown RBP7.72□□□□□ -1.17
COL11A1-211ENST00000635193 Q8N377 158 aa7.72□□□□□ -1.17
COL11A1-211ENST00000635193 DNAH10OSP0CZ25 163 aa7.71□□□□□ -1.18
COL11A1-211ENST00000635193 C8orf17Q9NRJ1 99 aa7.71□□□□□ -1.18
COL11A1-211ENST00000635193 Q5XG85 94 aa7.71□□□□□ -1.18
COL11A1-211ENST00000635193 OBSCN-AS1Q96MR7 158 aa7.71□□□□□ -1.18
COL11A1-211ENST00000635193 A0A0C4DFX4 3053 aa7.7□□□□□ -1.18
COL11A1-211ENST00000635193 MAST4O15021 2626 aa7.7□□□□□ -1.18
COL11A1-211ENST00000635193 PRR34Q9NV39 138 aa7.7□□□□□ -1.18
COL11A1-211ENST00000635193 MGAM2Q2M2H8 2515 aa7.69□□□□□ -1.18
COL11A1-211ENST00000635193 RBM12B-AS1Q9P1G2 102 aa7.69□□□□□ -1.18
COL11A1-211ENST00000635193 CRIPTQ9P021 101 aa7.68□□□□□ -1.18
COL11A1-211ENST00000635193 UNC80Q8N2C7 3258 aa7.68□□□□□ -1.18
COL11A1-211ENST00000635193 C15orf56Q8N910 161 aa7.67□□□□□ -1.18
COL11A1-211ENST00000635193 GIG44P09565 113 aaPredicted RBP7.67□□□□□ -1.18
COL11A1-211ENST00000635193 RTL8CO15255 209 aa7.67□□□□□ -1.18
COL11A1-211ENST00000635193 CENPEQ02224 2701 aa7.66□□□□□ -1.18
COL11A1-211ENST00000635193 ATRQ13535 2644 aa7.66□□□□□ -1.18
COL11A1-211ENST00000635193 NBDYA0A0U1RRE5 68 aa7.66□□□□□ -1.18
COL11A1-211ENST00000635193 TRANK1O15050 2925 aa7.66□□□□□ -1.18
COL11A1-211ENST00000635193 ZNF575Q86XF7 245 aa7.66□□□□□ -1.18
COL11A1-211ENST00000635193 OCR1Q9BZK8 76 aa7.66□□□□□ -1.18
COL11A1-211ENST00000635193 Q96NJ1 140 aa7.65□□□□□ -1.18
COL11A1-211ENST00000635193 PLA2G1BP04054 148 aaKnown RBP7.65□□□□□ -1.18
COL11A1-211ENST00000635193 CDH23Q9H251 3354 aa7.65□□□□□ -1.19
COL11A1-211ENST00000635193 A0A1B0GVX0 72 aa7.65□□□□□ -1.19
COL11A1-211ENST00000635193 HELZ2Q9BYK8 2649 aaKnown RBP7.64□□□□□ -1.19
COL11A1-211ENST00000635193 A0A0G2JQZ4 141 aa7.63□□□□□ -1.19
COL11A1-211ENST00000635193 A0A1W2PNN7 141 aa7.63□□□□□ -1.19
COL11A1-211ENST00000635193 LINC00612Q8N6U2 182 aa7.63□□□□□ -1.19
COL11A1-211ENST00000635193 A0A1W2PNM2 257 aa7.63□□□□□ -1.19
COL11A1-211ENST00000635193 C19orf73Q9NVV2 129 aa7.63□□□□□ -1.19
COL11A1-211ENST00000635193 FP248Q71RG6 208 aaPredicted RBP7.61□□□□□ -1.19
COL11A1-211ENST00000635193 DSCR10P59022 87 aa7.6□□□□□ -1.19
COL11A1-211ENST00000635193 KRTAP24-1Q3LI83 254 aa7.6□□□□□ -1.19
COL11A1-211ENST00000635193 TYMSOSQ8TAI1 123 aa7.6□□□□□ -1.19
COL11A1-211ENST00000635193 APLNQ9ULZ1 77 aa7.6□□□□□ -1.19
COL11A1-211ENST00000635193 CYSTM1Q9H1C7 97 aa7.6□□□□□ -1.19
COL11A1-211ENST00000635193 PLA2G2DQ9UNK4 145 aa7.6□□□□□ -1.19
COL11A1-211ENST00000635193 TLX1NBP0CAT3 122 aa7.59□□□□□ -1.19
COL11A1-211ENST00000635193 H3BS24 57 aa7.58□□□□□ -1.2
COL11A1-211ENST00000635193 FAM229BQ4G0N7 80 aa7.58□□□□□ -1.2
COL11A1-211ENST00000635193 Q75L30 129 aa7.58□□□□□ -1.2
COL11A1-211ENST00000635193 CFAP46Q8IYW2 2715 aa7.56□□□□□ -1.2
COL11A1-211ENST00000635193 LINC01554Q52M75 96 aa7.56□□□□□ -1.2
COL11A1-211ENST00000635193 IGLV5-48A0A075B6I7 105 aa7.56□□□□□ -1.2
COL11A1-211ENST00000635193 A0A096LNT2 108 aa7.56□□□□□ -1.2
COL11A1-211ENST00000635193 FAM104AQ969W3 186 aa7.55□□□□□ -1.2
COL11A1-211ENST00000635193 PRR26Q8N8Z3 221 aa7.54□□□□□ -1.2
COL11A1-211ENST00000635193 XIRP2A4UGR9 3374 aa7.52□□□□□ -1.21
COL11A1-211ENST00000635193 C9orf163Q8N9P6 203 aa7.52□□□□□ -1.21
COL11A1-211ENST00000635193 SZT2Q5T011 3432 aa7.52□□□□□ -1.21
COL11A1-211ENST00000635193 SETXQ7Z333 2677 aaKnown RBP7.51□□□□□ -1.21
COL11A1-211ENST00000635193 IGLV7-46A0A075B6I9 117 aa7.5□□□□□ -1.21
COL11A1-211ENST00000635193 Q8N9P0 234 aaPredicted RBP7.5□□□□□ -1.21
COL11A1-211ENST00000635193 KRTAP10-11P60412 298 aa7.5□□□□□ -1.21
COL11A1-211ENST00000635193 ZNF861PO60384 105 aa7.5□□□□□ -1.21
COL11A1-211ENST00000635193 BPTFQ12830 3046 aa7.49□□□□□ -1.21
COL11A1-211ENST00000635193 KRTAP10-3P60369 221 aa7.49□□□□□ -1.21
COL11A1-211ENST00000635193 PRAC1Q96KF2 57 aa7.48□□□□□ -1.21
COL11A1-211ENST00000635193 OXTP01178 125 aa7.48□□□□□ -1.21
COL11A1-211ENST00000635193 TRIOO75962 3097 aa7.47□□□□□ -1.21
COL11A1-211ENST00000635193 LINC01558Q9Y6Z2 57 aa7.47□□□□□ -1.21
COL11A1-211ENST00000635193 FLNAP21333 2647 aaKnown RBP7.47□□□□□ -1.21
COL11A1-211ENST00000635193 TEP1Q99973 2627 aaKnown RBP7.47□□□□□ -1.21
COL11A1-211ENST00000635193 ITPR3Q14573 2671 aa7.47□□□□□ -1.21
COL11A1-211ENST00000635193 CASC10Q5T4H9 136 aa7.47□□□□□ -1.21
COL11A1-211ENST00000635193 Q5VV11 94 aa7.46□□□□□ -1.22
COL11A1-211ENST00000635193 SPRR4Q96PI1 79 aa7.46□□□□□ -1.22
COL11A1-211ENST00000635193 ANAPC11Q9NYG5 84 aa7.45□□□□□ -1.22
COL11A1-211ENST00000635193 IGLV5-37A0A075B6J1 123 aa7.45□□□□□ -1.22
COL11A1-211ENST00000635193 WWC2-AS2Q96NR7 200 aa7.45□□□□□ -1.22
COL11A1-211ENST00000635193 ZNF292O60281 2723 aa7.44□□□□□ -1.22
COL11A1-211ENST00000635193 A0A0D9SG42 100 aa7.43□□□□□ -1.22
COL11A1-211ENST00000635193 Q8N1X5 172 aa7.42□□□□□ -1.22
COL11A1-211ENST00000635193 K7EIL1 84 aa7.42□□□□□ -1.22
COL11A1-211ENST00000635193 CNBPP62633 177 aaKnown RBP7.42□□□□□ -1.22
COL11A1-211ENST00000635193 WDFY4Q6ZS81 3184 aa7.41□□□□□ -1.22
COL11A1-211ENST00000635193 LUZP6Q538Z0 58 aa7.4□□□□□ -1.22
COL11A1-211ENST00000635193 A0A087WTM6 91 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms