RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 TRBV10-2A0A0K0K1G8 114 aa4.39□□□□□ -1.71
NPLOC4-221ENST00000625705 NDUFC2O95298 119 aa4.39□□□□□ -1.71
NPLOC4-221ENST00000625705 PCP2Q8IVA1 136 aa4.39□□□□□ -1.71
NPLOC4-221ENST00000625705 LINC00308Q8TCZ7 52 aa4.39□□□□□ -1.71
NPLOC4-221ENST00000625705 HIGD2AQ9BW72 106 aa4.39□□□□□ -1.71
NPLOC4-221ENST00000625705 CBY1Q9Y3M2 126 aa4.39□□□□□ -1.71
NPLOC4-221ENST00000625705 LRP1BQ9NZR2 4599 aa4.39□□□□□ -1.71
NPLOC4-221ENST00000625705 HSPG2P98160 4391 aa4.39□□□□□ -1.71
NPLOC4-221ENST00000625705 SOSTDC1Q6X4U4 206 aa4.38□□□□□ -1.71
NPLOC4-221ENST00000625705 LINC01600Q96MT4 127 aa4.38□□□□□ -1.71
NPLOC4-221ENST00000625705 VAMP8Q9BV40 100 aa4.38□□□□□ -1.71
NPLOC4-221ENST00000625705 SPANXCQ9NY87 97 aa4.38□□□□□ -1.71
NPLOC4-221ENST00000625705 HERC2O95714 4834 aa4.37□□□□□ -1.71
NPLOC4-221ENST00000625705 LOC107984156A0A0G2JMH3 177 aa4.37□□□□□ -1.71
NPLOC4-221ENST00000625705 HINT1P49773 126 aaPredicted RBP4.37□□□□□ -1.71
NPLOC4-221ENST00000625705 ARL17AQ8IVW1 177 aa4.37□□□□□ -1.71
NPLOC4-221ENST00000625705 LITAFQ99732 161 aa4.37□□□□□ -1.71
NPLOC4-221ENST00000625705 SPANXDQ9BXN6 97 aa4.37□□□□□ -1.71
NPLOC4-221ENST00000625705 PAM16Q9Y3D7 125 aa4.37□□□□□ -1.71
NPLOC4-221ENST00000625705 RYR1P21817 5038 aa4.36□□□□□ -1.71
NPLOC4-221ENST00000625705 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
NPLOC4-221ENST00000625705 TRAV23DV6A0A075B6W5 121 aa4.36□□□□□ -1.71
NPLOC4-221ENST00000625705 IFITM1P13164 125 aa4.36□□□□□ -1.71
NPLOC4-221ENST00000625705 RPL13AP40429 203 aaKnown RBP4.36□□□□□ -1.71
NPLOC4-221ENST00000625705 SPATA45Q537H7 98 aa4.36□□□□□ -1.71
NPLOC4-221ENST00000625705 Q6ZVH6 145 aa4.36□□□□□ -1.71
NPLOC4-221ENST00000625705 LINC00518Q8N0U6 118 aa4.36□□□□□ -1.71
NPLOC4-221ENST00000625705 PRR26Q8N8Z3 221 aa4.36□□□□□ -1.71
NPLOC4-221ENST00000625705 DNAH5Q8TE73 4624 aa4.35□□□□□ -1.71
NPLOC4-221ENST00000625705 A6NDN8 102 aa4.35□□□□□ -1.71
NPLOC4-221ENST00000625705 LINC00337Q8N6G1 96 aa4.35□□□□□ -1.71
NPLOC4-221ENST00000625705 HIST1H4GQ99525 98 aa4.35□□□□□ -1.71
NPLOC4-221ENST00000625705 KCNQ1DNQ9H478 68 aa4.35□□□□□ -1.71
NPLOC4-221ENST00000625705 ZNF706Q9Y5V0 76 aaPredicted RBP4.35□□□□□ -1.71
NPLOC4-221ENST00000625705 FLG2Q5D862 2391 aaPredicted RBP4.35□□□□□ -1.71
NPLOC4-221ENST00000625705 ZNF73O43830 326 aaPredicted RBP4.34□□□□□ -1.71
NPLOC4-221ENST00000625705 IGLV6-57P01721 117 aa4.34□□□□□ -1.71
NPLOC4-221ENST00000625705 JOSD1Q15040 202 aaPredicted RBP4.34□□□□□ -1.71
NPLOC4-221ENST00000625705 MUSTN1Q8IVN3 82 aa4.34□□□□□ -1.71
NPLOC4-221ENST00000625705 MT1HL1P0DM35 61 aa4.33□□□□□ -1.72
NPLOC4-221ENST00000625705 COX8AP10176 69 aa4.33□□□□□ -1.72
NPLOC4-221ENST00000625705 CRYGAP11844 174 aa4.33□□□□□ -1.72
NPLOC4-221ENST00000625705 Q6ZRX8 168 aa4.33□□□□□ -1.72
NPLOC4-221ENST00000625705 KRTAP13-1Q8IUC0 172 aa4.33□□□□□ -1.72
NPLOC4-221ENST00000625705 C14orf144Q96I85 54 aa4.33□□□□□ -1.72
NPLOC4-221ENST00000625705 TRAV13-2A0A0B4J235 113 aa4.32□□□□□ -1.72
NPLOC4-221ENST00000625705 KRTAP1-4P0C5Y4 121 aa4.32□□□□□ -1.72
NPLOC4-221ENST00000625705 SPRR1AP35321 89 aa4.32□□□□□ -1.72
NPLOC4-221ENST00000625705 SLC25A34Q6PIV7 304 aa4.32□□□□□ -1.72
NPLOC4-221ENST00000625705 TYMSOSQ8TAI1 123 aa4.32□□□□□ -1.72
NPLOC4-221ENST00000625705 SMCR5Q8TEV8 140 aa4.32□□□□□ -1.72
NPLOC4-221ENST00000625705 C6orf99Q4VX62 202 aa4.31□□□□□ -1.72
NPLOC4-221ENST00000625705 C12orf57Q99622 126 aa4.31□□□□□ -1.72
NPLOC4-221ENST00000625705 PPDPFQ9H3Y8 114 aa4.31□□□□□ -1.72
NPLOC4-221ENST00000625705 ANAPC11Q9NYG5 84 aa4.31□□□□□ -1.72
NPLOC4-221ENST00000625705 A4D1N5 150 aa4.3□□□□□ -1.72
NPLOC4-221ENST00000625705 DLEU1O43261 78 aa4.3□□□□□ -1.72
NPLOC4-221ENST00000625705 COX7BP24311 80 aa4.3□□□□□ -1.72
NPLOC4-221ENST00000625705 KRTAP10-8P60410 259 aa4.3□□□□□ -1.72
NPLOC4-221ENST00000625705 FAM229BQ4G0N7 80 aa4.3□□□□□ -1.72
NPLOC4-221ENST00000625705 GAGE2AQ6NT46 116 aa4.3□□□□□ -1.72
NPLOC4-221ENST00000625705 SPRR4Q96PI1 79 aa4.3□□□□□ -1.72
NPLOC4-221ENST00000625705 SRRM2Q9UQ35 2752 aaKnown RBP4.3□□□□□ -1.72
NPLOC4-221ENST00000625705 A0A087X002 238 aa4.29□□□□□ -1.72
NPLOC4-221ENST00000625705 KRTAP4-16G5E9R7 235 aaPredicted RBP4.29□□□□□ -1.72
NPLOC4-221ENST00000625705 PYY3Q5JQD4 70 aa4.29□□□□□ -1.72
NPLOC4-221ENST00000625705 RAB37Q96AX2 223 aa4.29□□□□□ -1.72
NPLOC4-221ENST00000625705 DHRS4-AS1Q9P1J3 65 aa4.29□□□□□ -1.72
NPLOC4-221ENST00000625705 PCLOQ9Y6V0 5065 aa4.28□□□□□ -1.72
NPLOC4-221ENST00000625705 A0A1B0GWB2 263 aa4.28□□□□□ -1.72
NPLOC4-221ENST00000625705 H7C2G1 150 aa4.28□□□□□ -1.72
NPLOC4-221ENST00000625705 VAMP3Q15836 100 aa4.28□□□□□ -1.72
NPLOC4-221ENST00000625705 Q9BRP9 147 aa4.28□□□□□ -1.72
NPLOC4-221ENST00000625705 IGLV9-49A0A0B4J1Y8 123 aa4.27□□□□□ -1.73
NPLOC4-221ENST00000625705 SLC25A20O43772 301 aa4.27□□□□□ -1.73
NPLOC4-221ENST00000625705 ERC2-IT1O76042 136 aa4.27□□□□□ -1.73
NPLOC4-221ENST00000625705 TSPAN13O95857 204 aa4.27□□□□□ -1.73
NPLOC4-221ENST00000625705 ELOF1P60002 83 aaKnown RBP4.27□□□□□ -1.73
NPLOC4-221ENST00000625705 TAL2Q16559 108 aa4.27□□□□□ -1.73
NPLOC4-221ENST00000625705 Q1RN00 199 aa4.27□□□□□ -1.73
NPLOC4-221ENST00000625705 C9orf153Q5TBE3 101 aa4.27□□□□□ -1.73
NPLOC4-221ENST00000625705 SMIM11BQ8TCY0 68 aa4.27□□□□□ -1.73
NPLOC4-221ENST00000625705 NHP2Q9NX24 153 aaKnown RBP4.27□□□□□ -1.73
NPLOC4-221ENST00000625705 HIGD1BQ9P298 99 aa4.27□□□□□ -1.73
NPLOC4-221ENST00000625705 TRBV7-6A0A0J9YX20 115 aa4.26□□□□□ -1.73
NPLOC4-221ENST00000625705 TRIAP1O43715 76 aa4.26□□□□□ -1.73
NPLOC4-221ENST00000625705 MOBPQ13875 183 aa4.26□□□□□ -1.73
NPLOC4-221ENST00000625705 C2orf91Q6ZV80 131 aa4.26□□□□□ -1.73
NPLOC4-221ENST00000625705 C3orf22Q8N5N4 141 aa4.26□□□□□ -1.73
NPLOC4-221ENST00000625705 LINC00304Q8N9R0 145 aa4.26□□□□□ -1.73
NPLOC4-221ENST00000625705 DEFB105AQ8NG35 78 aa4.26□□□□□ -1.73
NPLOC4-221ENST00000625705 KRTAP13-2Q52LG2 175 aa4.25□□□□□ -1.73
NPLOC4-221ENST00000625705 CEND1Q8N111 149 aa4.25□□□□□ -1.73
NPLOC4-221ENST00000625705 ST20-AS1Q8NBB2 130 aa4.25□□□□□ -1.73
NPLOC4-221ENST00000625705 UQCR10Q9UDW1 63 aa4.25□□□□□ -1.73
NPLOC4-221ENST00000625705 DNAH8Q96JB1 4490 aa4.25□□□□□ -1.73
NPLOC4-221ENST00000625705 SNCGO76070 127 aa4.24□□□□□ -1.73
NPLOC4-221ENST00000625705 HSD52Q0P140 79 aa4.24□□□□□ -1.73
NPLOC4-221ENST00000625705 LAMTOR3Q9UHA4 124 aa4.24□□□□□ -1.73
NPLOC4-221ENST00000625705 DMBT1Q9UGM3 2413 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms