RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 M0R378 163 aa5.84□□□□□ -1.47
LINC01560-202ENST00000624822 OXTP01178 125 aa5.84□□□□□ -1.47
LINC01560-202ENST00000624822 SRSF9Q13242 221 aaKnown RBP eCLIP5.84□□□□□ -1.47
LINC01560-202ENST00000624822 ADAMTSL4-AS1Q5T5F5 129 aa5.84□□□□□ -1.47
LINC01560-202ENST00000624822 DMBT1Q9UGM3 2413 aaPredicted RBP5.83□□□□□ -1.48
LINC01560-202ENST00000624822 BCE1O60756 84 aa5.83□□□□□ -1.48
LINC01560-202ENST00000624822 UBE2AP49459 152 aa5.83□□□□□ -1.48
LINC01560-202ENST00000624822 DIRC1Q969H9 104 aa5.83□□□□□ -1.48
LINC01560-202ENST00000624822 TMEM238C9JI98 176 aa5.82□□□□□ -1.48
LINC01560-202ENST00000624822 ZNF861PO60384 105 aa5.82□□□□□ -1.48
LINC01560-202ENST00000624822 TIMM17BO60830 172 aa5.82□□□□□ -1.48
LINC01560-202ENST00000624822 RPL28P46779 137 aaKnown RBP5.82□□□□□ -1.48
LINC01560-202ENST00000624822 FAM19A1Q7Z5A9 133 aa5.82□□□□□ -1.48
LINC01560-202ENST00000624822 PCP2Q8IVA1 136 aa5.82□□□□□ -1.48
LINC01560-202ENST00000624822 TMEM126AQ9H061 195 aa5.82□□□□□ -1.48
LINC01560-202ENST00000624822 LOC107984156A0A0G2JMH3 177 aa5.81□□□□□ -1.48
LINC01560-202ENST00000624822 H0Y9J4 135 aa5.81□□□□□ -1.48
LINC01560-202ENST00000624822 S100A7L2Q5SY68 101 aa5.81□□□□□ -1.48
LINC01560-202ENST00000624822 SOSTDC1Q6X4U4 206 aa5.81□□□□□ -1.48
LINC01560-202ENST00000624822 ARL17AQ8IVW1 177 aa5.81□□□□□ -1.48
LINC01560-202ENST00000624822 C14orf144Q96I85 54 aa5.81□□□□□ -1.48
LINC01560-202ENST00000624822 LITAFQ99732 161 aa5.81□□□□□ -1.48
LINC01560-202ENST00000624822 SPANXB1Q9NS25 103 aaPredicted RBP5.81□□□□□ -1.48
LINC01560-202ENST00000624822 UQCR10Q9UDW1 63 aa5.81□□□□□ -1.48
LINC01560-202ENST00000624822 MYCBP2O75592 4640 aa5.81□□□□□ -1.48
LINC01560-202ENST00000624822 TRBV10-3A0A0K0K1G6 114 aa5.8□□□□□ -1.48
LINC01560-202ENST00000624822 NDUFC2O95298 119 aa5.8□□□□□ -1.48
LINC01560-202ENST00000624822 PRLHP81277 87 aa5.8□□□□□ -1.48
LINC01560-202ENST00000624822 LINC00308Q8TCZ7 52 aa5.8□□□□□ -1.48
LINC01560-202ENST00000624822 TRBV10-2A0A0K0K1G8 114 aa5.79□□□□□ -1.48
LINC01560-202ENST00000624822 PRYO14603 147 aa5.79□□□□□ -1.48
LINC01560-202ENST00000624822 SPANXDQ9BXN6 97 aa5.79□□□□□ -1.48
LINC01560-202ENST00000624822 KRTAP9-8Q9BYQ0 159 aa5.79□□□□□ -1.48
LINC01560-202ENST00000624822 SPANXCQ9NY87 97 aa5.79□□□□□ -1.48
LINC01560-202ENST00000624822 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
LINC01560-202ENST00000624822 LRP1Q07954 4544 aaKnown RBP5.79□□□□□ -1.48
LINC01560-202ENST00000624822 OR13C6PQ8NH95 151 aa5.78□□□□□ -1.48
LINC01560-202ENST00000624822 COPS9Q8WXC6 57 aa5.78□□□□□ -1.48
LINC01560-202ENST00000624822 LINC01600Q96MT4 127 aa5.78□□□□□ -1.48
LINC01560-202ENST00000624822 ETDCA0A1B0GVM5 59 aa5.77□□□□□ -1.49
LINC01560-202ENST00000624822 CTAG1AP78358 180 aa5.77□□□□□ -1.49
LINC01560-202ENST00000624822 SLC25A34Q6PIV7 304 aa5.77□□□□□ -1.49
LINC01560-202ENST00000624822 HIGD2AQ9BW72 106 aa5.77□□□□□ -1.49
LINC01560-202ENST00000624822 M0R143 59 aa5.76□□□□□ -1.49
LINC01560-202ENST00000624822 IFITM1P13164 125 aa5.76□□□□□ -1.49
LINC01560-202ENST00000624822 Q6ZVH6 145 aa5.76□□□□□ -1.49
LINC01560-202ENST00000624822 KCNQ1DNQ9H478 68 aa5.76□□□□□ -1.49
LINC01560-202ENST00000624822 TRAV23DV6A0A075B6W5 121 aa5.75□□□□□ -1.49
LINC01560-202ENST00000624822 COX8AP10176 69 aa5.75□□□□□ -1.49
LINC01560-202ENST00000624822 KRTAP13-1Q8IUC0 172 aa5.75□□□□□ -1.49
LINC01560-202ENST00000624822 MUSTN1Q8IVN3 82 aa5.75□□□□□ -1.49
LINC01560-202ENST00000624822 IGLV6-57P01721 117 aa5.74□□□□□ -1.49
LINC01560-202ENST00000624822 MT1HL1P0DM35 61 aa5.74□□□□□ -1.49
LINC01560-202ENST00000624822 BATFQ16520 125 aa5.74□□□□□ -1.49
LINC01560-202ENST00000624822 LINC00337Q8N6G1 96 aa5.74□□□□□ -1.49
LINC01560-202ENST00000624822 PRR26Q8N8Z3 221 aa5.74□□□□□ -1.49
LINC01560-202ENST00000624822 SNHG12Q9BXW3 62 aa5.74□□□□□ -1.49
LINC01560-202ENST00000624822 CBY1Q9Y3M2 126 aa5.74□□□□□ -1.49
LINC01560-202ENST00000624822 KRTAP1-4P0C5Y4 121 aa5.73□□□□□ -1.49
LINC01560-202ENST00000624822 SPRR1AP35321 89 aa5.73□□□□□ -1.49
LINC01560-202ENST00000624822 A6NDN8 102 aa5.72□□□□□ -1.49
LINC01560-202ENST00000624822 ZNF73O43830 326 aaPredicted RBP5.72□□□□□ -1.49
LINC01560-202ENST00000624822 HINT1P49773 126 aaPredicted RBP5.72□□□□□ -1.49
LINC01560-202ENST00000624822 HIST1H4GQ99525 98 aa5.72□□□□□ -1.49
LINC01560-202ENST00000624822 HERC1Q15751 4861 aa5.71□□□□□ -1.5
LINC01560-202ENST00000624822 B5MCH6 92 aa5.71□□□□□ -1.5
LINC01560-202ENST00000624822 KRTAP4-16G5E9R7 235 aaPredicted RBP5.71□□□□□ -1.5
LINC01560-202ENST00000624822 DLEU1O43261 78 aa5.71□□□□□ -1.5
LINC01560-202ENST00000624822 RPL13AP40429 203 aaKnown RBP5.71□□□□□ -1.5
LINC01560-202ENST00000624822 PPDPFQ9H3Y8 114 aa5.71□□□□□ -1.5
LINC01560-202ENST00000624822 CRYGAP11844 174 aa5.7□□□□□ -1.5
LINC01560-202ENST00000624822 KRTAP10-8P60410 259 aa5.7□□□□□ -1.5
LINC01560-202ENST00000624822 Q6ZRX8 168 aa5.7□□□□□ -1.5
LINC01560-202ENST00000624822 C2orf91Q6ZV80 131 aa5.7□□□□□ -1.5
LINC01560-202ENST00000624822 SMCR5Q8TEV8 140 aa5.7□□□□□ -1.5
LINC01560-202ENST00000624822 ANAPC11Q9NYG5 84 aa5.7□□□□□ -1.5
LINC01560-202ENST00000624822 ZNF706Q9Y5V0 76 aaPredicted RBP5.7□□□□□ -1.5
LINC01560-202ENST00000624822 TRAV13-2A0A0B4J235 113 aa5.69□□□□□ -1.5
LINC01560-202ENST00000624822 A0A087X002 238 aa5.68□□□□□ -1.5
LINC01560-202ENST00000624822 A0A1B0GV90 55 aa5.68□□□□□ -1.5
LINC01560-202ENST00000624822 A4D1N5 150 aa5.68□□□□□ -1.5
LINC01560-202ENST00000624822 C6orf99Q4VX62 202 aa5.68□□□□□ -1.5
LINC01560-202ENST00000624822 TYMSOSQ8TAI1 123 aa5.68□□□□□ -1.5
LINC01560-202ENST00000624822 HSD52Q0P140 79 aa5.67□□□□□ -1.5
LINC01560-202ENST00000624822 FAM229BQ4G0N7 80 aa5.67□□□□□ -1.5
LINC01560-202ENST00000624822 COL5A1-AS1Q5SY13 56 aa5.67□□□□□ -1.5
LINC01560-202ENST00000624822 BVES-AS1Q5T3Y7 98 aa5.67□□□□□ -1.5
LINC01560-202ENST00000624822 SPRR4Q96PI1 79 aa5.67□□□□□ -1.5
LINC01560-202ENST00000624822 Q9BRP9 147 aa5.67□□□□□ -1.5
LINC01560-202ENST00000624822 COX7BP24311 80 aa5.66□□□□□ -1.5
LINC01560-202ENST00000624822 GAGE2AQ6NT46 116 aa5.66□□□□□ -1.5
LINC01560-202ENST00000624822 HIGD1BQ9P298 99 aa5.66□□□□□ -1.5
LINC01560-202ENST00000624822 TNXBP22105 4242 aa5.65□□□□□ -1.5
LINC01560-202ENST00000624822 ERC2-IT1O76042 136 aa5.65□□□□□ -1.5
LINC01560-202ENST00000624822 ELOF1P60002 83 aaKnown RBP5.65□□□□□ -1.5
LINC01560-202ENST00000624822 KRTAP13-2Q52LG2 175 aa5.64□□□□□ -1.51
LINC01560-202ENST00000624822 SMIM11BQ8TCY0 68 aa5.64□□□□□ -1.51
LINC01560-202ENST00000624822 DHRS4-AS1Q9P1J3 65 aa5.64□□□□□ -1.51
LINC01560-202ENST00000624822 A0A1B0GWB2 263 aa5.63□□□□□ -1.51
LINC01560-202ENST00000624822 C3orf22Q8N5N4 141 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms