RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 C5orf52A6NGY3 159 aa7.25□□□□□ -1.25
LINC00963-217ENST00000624009 SNRPEP62304 92 aaKnown RBP7.25□□□□□ -1.25
LINC00963-217ENST00000624009 JOSD1Q15040 202 aaPredicted RBP7.25□□□□□ -1.25
LINC00963-217ENST00000624009 LINC00483Q53H64 154 aa7.25□□□□□ -1.25
LINC00963-217ENST00000624009 SPAG11AQ6PDA7 123 aa7.25□□□□□ -1.25
LINC00963-217ENST00000624009 LINC00308Q8TCZ7 52 aa7.25□□□□□ -1.25
LINC00963-217ENST00000624009 SMCR5Q8TEV8 140 aa7.25□□□□□ -1.25
LINC00963-217ENST00000624009 COPS9Q8WXC6 57 aa7.25□□□□□ -1.25
LINC00963-217ENST00000624009 TRAV23DV6A0A075B6W5 121 aa7.24□□□□□ -1.25
LINC00963-217ENST00000624009 Q6ZVH6 145 aa7.24□□□□□ -1.25
LINC00963-217ENST00000624009 LINC00518Q8N0U6 118 aa7.24□□□□□ -1.25
LINC00963-217ENST00000624009 ZNF73O43830 326 aaPredicted RBP7.23□□□□□ -1.25
LINC00963-217ENST00000624009 EIF4EBP3O60516 100 aaPredicted RBP7.23□□□□□ -1.25
LINC00963-217ENST00000624009 TSPAN13O95857 204 aa7.22□□□□□ -1.25
LINC00963-217ENST00000624009 PRR4Q16378 134 aa7.22□□□□□ -1.25
LINC00963-217ENST00000624009 SPANXDQ9BXN6 97 aa7.22□□□□□ -1.25
LINC00963-217ENST00000624009 IFITM1P13164 125 aa7.21□□□□□ -1.26
LINC00963-217ENST00000624009 HINT1P49773 126 aaPredicted RBP7.21□□□□□ -1.26
LINC00963-217ENST00000624009 Q9BRP9 147 aa7.21□□□□□ -1.26
LINC00963-217ENST00000624009 NPC2P61916 151 aa7.2□□□□□ -1.26
LINC00963-217ENST00000624009 SCGB1D4Q6XE38 83 aa7.2□□□□□ -1.26
LINC00963-217ENST00000624009 C3orf22Q8N5N4 141 aa7.2□□□□□ -1.26
LINC00963-217ENST00000624009 ANKRD39Q53RE8 183 aa7.19□□□□□ -1.26
LINC00963-217ENST00000624009 HIST3H2BBQ8N257 126 aa7.19□□□□□ -1.26
LINC00963-217ENST00000624009 TTTY13Q9BZ97 58 aa7.19□□□□□ -1.26
LINC00963-217ENST00000624009 S100A2P29034 98 aa7.18□□□□□ -1.26
LINC00963-217ENST00000624009 SSBP3-AS1Q7Z2R9 100 aa7.18□□□□□ -1.26
LINC00963-217ENST00000624009 HIST1H2BLQ99880 126 aa7.18□□□□□ -1.26
LINC00963-217ENST00000624009 ERC2-IT1O76042 136 aa7.17□□□□□ -1.26
LINC00963-217ENST00000624009 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
LINC00963-217ENST00000624009 C4orf48Q5BLP8 95 aa7.17□□□□□ -1.26
LINC00963-217ENST00000624009 GAGE2AQ6NT46 116 aa7.17□□□□□ -1.26
LINC00963-217ENST00000624009 DHRS4-AS1Q9P1J3 65 aa7.17□□□□□ -1.26
LINC00963-217ENST00000624009 TRBV7-6A0A0J9YX20 115 aa7.16□□□□□ -1.26
LINC00963-217ENST00000624009 SPINK1P00995 79 aa7.16□□□□□ -1.26
LINC00963-217ENST00000624009 S100A6P06703 90 aa7.16□□□□□ -1.26
LINC00963-217ENST00000624009 OR13C6PQ8NH95 151 aa7.16□□□□□ -1.26
LINC00963-217ENST00000624009 Q8NBF4 154 aa7.15□□□□□ -1.26
LINC00963-217ENST00000624009 HSBP1L1C9JCN9 74 aa7.14□□□□□ -1.27
LINC00963-217ENST00000624009 ELOF1P60002 83 aaKnown RBP7.14□□□□□ -1.27
LINC00963-217ENST00000624009 TPRXLQ17RH7 258 aa7.14□□□□□ -1.27
LINC00963-217ENST00000624009 FP248Q71RG6 208 aaPredicted RBP7.14□□□□□ -1.27
LINC00963-217ENST00000624009 PCP2Q8IVA1 136 aa7.14□□□□□ -1.27
LINC00963-217ENST00000624009 ATOH7Q8N100 152 aa7.14□□□□□ -1.27
LINC00963-217ENST00000624009 SPRR1BP22528 89 aa7.13□□□□□ -1.27
LINC00963-217ENST00000624009 SLC25A34Q6PIV7 304 aa7.13□□□□□ -1.27
LINC00963-217ENST00000624009 IGLV7-46A0A075B6I9 117 aa7.11□□□□□ -1.27
LINC00963-217ENST00000624009 TRAV13-2A0A0B4J235 113 aa7.11□□□□□ -1.27
LINC00963-217ENST00000624009 A4D1N5 150 aa7.1□□□□□ -1.27
LINC00963-217ENST00000624009 COX7BP24311 80 aa7.1□□□□□ -1.27
LINC00963-217ENST00000624009 MOBPQ13875 183 aa7.1□□□□□ -1.27
LINC00963-217ENST00000624009 C6orf99Q4VX62 202 aa7.1□□□□□ -1.27
LINC00963-217ENST00000624009 MUSTN1Q8IVN3 82 aa7.1□□□□□ -1.27
LINC00963-217ENST00000624009 RETNLBQ9BQ08 111 aa7.1□□□□□ -1.27
LINC00963-217ENST00000624009 MUC2Q02817 5179 aa7.1□□□□□ -1.27
LINC00963-217ENST00000624009 IGLV9-49A0A0B4J1Y8 123 aa7.09□□□□□ -1.27
LINC00963-217ENST00000624009 A0A1B0GWB2 263 aa7.09□□□□□ -1.27
LINC00963-217ENST00000624009 A6NDN8 102 aa7.07□□□□□ -1.28
LINC00963-217ENST00000624009 ST20-AS1Q8NBB2 130 aa7.07□□□□□ -1.28
LINC00963-217ENST00000624009 SLC25A20O43772 301 aa7.06□□□□□ -1.28
LINC00963-217ENST00000624009 NHP2Q9NX24 153 aaKnown RBP7.06□□□□□ -1.28
LINC00963-217ENST00000624009 LAMTOR3Q9UHA4 124 aa7.06□□□□□ -1.28
LINC00963-217ENST00000624009 DLEU1O43261 78 aa7.05□□□□□ -1.28
LINC00963-217ENST00000624009 C9orf153Q5TBE3 101 aa7.05□□□□□ -1.28
LINC00963-217ENST00000624009 CDIP1Q9H305 208 aa7.05□□□□□ -1.28
LINC00963-217ENST00000624009 IGLV5-48A0A075B6I7 105 aa7.04□□□□□ -1.28
LINC00963-217ENST00000624009 TEX49A0A1B0GTD5 131 aa7.04□□□□□ -1.28
LINC00963-217ENST00000624009 SCGB1D1O95968 90 aa7.04□□□□□ -1.28
LINC00963-217ENST00000624009 Q8N377 158 aa7.04□□□□□ -1.28
LINC00963-217ENST00000624009 COX8AP10176 69 aa7.03□□□□□ -1.28
LINC00963-217ENST00000624009 CD164Q04900 197 aa7.02□□□□□ -1.29
LINC00963-217ENST00000624009 VAMP3Q15836 100 aa7.02□□□□□ -1.29
LINC00963-217ENST00000624009 SMIM11BQ8TCY0 68 aa7.02□□□□□ -1.29
LINC00963-217ENST00000624009 TAL2Q16559 108 aa7.01□□□□□ -1.29
LINC00963-217ENST00000624009 KRTAP13-3Q3SY46 172 aa7.01□□□□□ -1.29
LINC00963-217ENST00000624009 LIMD2Q9BT23 127 aa7.01□□□□□ -1.29
LINC00963-217ENST00000624009 A0A0U1RQV1 116 aa7□□□□□ -1.29
LINC00963-217ENST00000624009 LINC01547P58512 204 aaPredicted RBP7□□□□□ -1.29
LINC00963-217ENST00000624009 PRO1933Q9H354 126 aa6.99□□□□□ -1.29
LINC00963-217ENST00000624009 MUC17Q685J3 4493 aa6.99□□□□□ -1.29
LINC00963-217ENST00000624009 Q5XG85 94 aa6.98□□□□□ -1.29
LINC00963-217ENST00000624009 HIST1H4GQ99525 98 aa6.98□□□□□ -1.29
LINC00963-217ENST00000624009 HIGD1BQ9P298 99 aa6.98□□□□□ -1.29
LINC00963-217ENST00000624009 SMIM29Q86T20 159 aa6.97□□□□□ -1.29
LINC00963-217ENST00000624009 Q1RN00 199 aa6.96□□□□□ -1.3
LINC00963-217ENST00000624009 BVES-AS1Q5T3Y7 98 aa6.96□□□□□ -1.3
LINC00963-217ENST00000624009 LINC00575Q6W349 94 aa6.96□□□□□ -1.3
LINC00963-217ENST00000624009 DEFB105AQ8NG35 78 aa6.96□□□□□ -1.3
LINC00963-217ENST00000624009 hADV29S1A0JD25 119 aa6.94□□□□□ -1.3
LINC00963-217ENST00000624009 PPDPFLQ8WWR9 84 aa6.94□□□□□ -1.3
LINC00963-217ENST00000624009 VAMP8Q9BV40 100 aa6.94□□□□□ -1.3
LINC00963-217ENST00000624009 H7C2G1 150 aa6.93□□□□□ -1.3
LINC00963-217ENST00000624009 SPATA45Q537H7 98 aa6.93□□□□□ -1.3
LINC00963-217ENST00000624009 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
LINC00963-217ENST00000624009 ASB16-AS1Q495Z4 193 aa6.92□□□□□ -1.3
LINC00963-217ENST00000624009 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.92□□□□□ -1.3
LINC00963-217ENST00000624009 C14orf144Q96I85 54 aa6.92□□□□□ -1.3
LINC00963-217ENST00000624009 PAM16Q9Y3D7 125 aa6.92□□□□□ -1.3
LINC00963-217ENST00000624009 A0A0B4J2C4 111 aa6.91□□□□□ -1.3
LINC00963-217ENST00000624009 IGLV8-61A0A075B6I0 122 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms