RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 C14orf177Q52M58 125 aa8.67□□□□□ -1.02
MSH6-215ENST00000622629 LINC00612Q8N6U2 182 aa8.67□□□□□ -1.02
MSH6-215ENST00000622629 M0R2N4 97 aa8.67□□□□□ -1.02
MSH6-215ENST00000622629 CSMD1Q96PZ7 3565 aa8.67□□□□□ -1.02
MSH6-215ENST00000622629 TRAV7A0A075B6U4 112 aa8.66□□□□□ -1.02
MSH6-215ENST00000622629 NDUFB1O75438 58 aa8.66□□□□□ -1.02
MSH6-215ENST00000622629 LINC01556Q5JQF7 62 aa8.66□□□□□ -1.02
MSH6-215ENST00000622629 CD164Q04900 197 aa8.65□□□□□ -1.02
MSH6-215ENST00000622629 WFDC13Q8IUB5 93 aa8.65□□□□□ -1.02
MSH6-215ENST00000622629 C7orf33Q8WU49 177 aa8.65□□□□□ -1.02
MSH6-215ENST00000622629 B9D2Q9BPU9 175 aa8.65□□□□□ -1.02
MSH6-215ENST00000622629 MXRA5Q9NR99 2828 aa8.64□□□□□ -1.03
MSH6-215ENST00000622629 Q6ZQT0 140 aa8.63□□□□□ -1.03
MSH6-215ENST00000622629 LINC00336Q6ZUF6 198 aa8.63□□□□□ -1.03
MSH6-215ENST00000622629 FAM30AQ9NZY2 134 aa8.63□□□□□ -1.03
MSH6-215ENST00000622629 PRR4Q16378 134 aa8.61□□□□□ -1.03
MSH6-215ENST00000622629 C22orf24Q9Y442 160 aa8.61□□□□□ -1.03
MSH6-215ENST00000622629 TENM4Q6N022 2769 aa8.61□□□□□ -1.03
MSH6-215ENST00000622629 IGLV6-57P01721 117 aa8.61□□□□□ -1.03
MSH6-215ENST00000622629 ELOF1P60002 83 aaKnown RBP8.61□□□□□ -1.03
MSH6-215ENST00000622629 CELSR1Q9NYQ6 3014 aa8.61□□□□□ -1.03
MSH6-215ENST00000622629 REG3GQ6UW15 175 aa8.61□□□□□ -1.03
MSH6-215ENST00000622629 Q6ZRP5 223 aa8.61□□□□□ -1.03
MSH6-215ENST00000622629 MDFIQ99750 246 aa8.61□□□□□ -1.03
MSH6-215ENST00000622629 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
MSH6-215ENST00000622629 H3BNG1 76 aa8.6□□□□□ -1.03
MSH6-215ENST00000622629 PRLHP81277 87 aa8.6□□□□□ -1.03
MSH6-215ENST00000622629 KMT2BQ9UMN6 2715 aaPredicted RBP8.6□□□□□ -1.03
MSH6-215ENST00000622629 NIPBLQ6KC79 2804 aaeCLIP8.59□□□□□ -1.032e-6■■□□□ 12.2
MSH6-215ENST00000622629 DEFB116Q30KQ4 102 aa8.59□□□□□ -1.03
MSH6-215ENST00000622629 LINC00167Q96N53 147 aa8.59□□□□□ -1.03
MSH6-215ENST00000622629 CRYGAP11844 174 aa8.59□□□□□ -1.03
MSH6-215ENST00000622629 RPS28P62857 69 aaKnown RBP8.58□□□□□ -1.04
MSH6-215ENST00000622629 GVQW2A0A096LPI5 108 aaPredicted RBP8.58□□□□□ -1.04
MSH6-215ENST00000622629 NDUFC1O43677 76 aa8.57□□□□□ -1.04
MSH6-215ENST00000622629 PRYO14603 147 aa8.56□□□□□ -1.04
MSH6-215ENST00000622629 KRTAP10-11P60412 298 aa8.56□□□□□ -1.04
MSH6-215ENST00000622629 CXCL6P80162 114 aa8.56□□□□□ -1.04
MSH6-215ENST00000622629 NSD1Q96L73 2696 aaPredicted RBP8.56□□□□□ -1.04
MSH6-215ENST00000622629 A0A087WSZ3 146 aa8.56□□□□□ -1.04
MSH6-215ENST00000622629 LINC00588Q9Y4M8 146 aa8.55□□□□□ -1.04
MSH6-215ENST00000622629 LOC110117498A0A087WWA1 95 aa8.55□□□□□ -1.04
MSH6-215ENST00000622629 LINC01600Q96MT4 127 aa8.55□□□□□ -1.04
MSH6-215ENST00000622629 SVEP1Q4LDE5 3571 aa8.55□□□□□ -1.04
MSH6-215ENST00000622629 IGLV9-49A0A0B4J1Y8 123 aa8.54□□□□□ -1.04
MSH6-215ENST00000622629 TMEM254Q8TBM7 123 aa8.54□□□□□ -1.04
MSH6-215ENST00000622629 SERP1Q9Y6X1 66 aa8.53□□□□□ -1.04
MSH6-215ENST00000622629 ST20-AS1Q8NBB2 130 aa8.53□□□□□ -1.04
MSH6-215ENST00000622629 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
MSH6-215ENST00000622629 C15orf56Q8N910 161 aa8.52□□□□□ -1.05
MSH6-215ENST00000622629 TRBV7-6A0A0J9YX20 115 aa8.52□□□□□ -1.05
MSH6-215ENST00000622629 CUBNO60494 3623 aa8.52□□□□□ -1.05
MSH6-215ENST00000622629 Q9BRP9 147 aa8.51□□□□□ -1.05
MSH6-215ENST00000622629 LRCOL1A6NCL2 159 aa8.51□□□□□ -1.05
MSH6-215ENST00000622629 SPENQ96T58 3664 aaKnown RBP8.5□□□□□ -1.05
MSH6-215ENST00000622629 Q6ZRX8 168 aa8.5□□□□□ -1.05
MSH6-215ENST00000622629 LINC00528Q8N1L1 170 aa8.5□□□□□ -1.05
MSH6-215ENST00000622629 SPINK6Q6UWN8 80 aa8.49□□□□□ -1.05
MSH6-215ENST00000622629 TM2D3Q9BRN9 247 aa8.49□□□□□ -1.05
MSH6-215ENST00000622629 DNAH10OSP0CZ25 163 aa8.49□□□□□ -1.05
MSH6-215ENST00000622629 IGKV4-1P06312 121 aa8.48□□□□□ -1.05
MSH6-215ENST00000622629 LINC00208Q96KT6 92 aa8.47□□□□□ -1.05
MSH6-215ENST00000622629 CHKB-CPT1BH3BT56 60 aa8.46□□□□□ -1.05
MSH6-215ENST00000622629 ATP5EP56381 51 aaPredicted RBP8.46□□□□□ -1.05
MSH6-215ENST00000622629 SMIM29Q86T20 159 aa8.46□□□□□ -1.05
MSH6-215ENST00000622629 Q8NDZ9 215 aa8.46□□□□□ -1.05
MSH6-215ENST00000622629 A6NED7 52 aa8.46□□□□□ -1.06
MSH6-215ENST00000622629 PSPHP1O15172 72 aa8.45□□□□□ -1.06
MSH6-215ENST00000622629 LINC00474Q9P2X8 69 aa8.45□□□□□ -1.06
MSH6-215ENST00000622629 BSNQ9UPA5 3926 aa8.45□□□□□ -1.06
MSH6-215ENST00000622629 CHTF8P0CG12 524 aa8.44□□□□□ -1.06
MSH6-215ENST00000622629 Q8NBF4 154 aa8.44□□□□□ -1.06
MSH6-215ENST00000622629 OBSCN-AS1Q96MR7 158 aa8.44□□□□□ -1.06
MSH6-215ENST00000622629 KCNQ1DNQ9H478 68 aa8.43□□□□□ -1.06
MSH6-215ENST00000622629 CASC10Q5T4H9 136 aa8.43□□□□□ -1.06
MSH6-215ENST00000622629 LINC00476Q8WZB0 136 aa8.43□□□□□ -1.06
MSH6-215ENST00000622629 PHF5AQ7RTV0 110 aaKnown RBP8.42□□□□□ -1.06
MSH6-215ENST00000622629 ZNF706Q9Y5V0 76 aaPredicted RBP8.42□□□□□ -1.06
MSH6-215ENST00000622629 LY6G6CO95867 125 aa8.42□□□□□ -1.06
MSH6-215ENST00000622629 TRBV7-4A0A0J9YYF1 115 aa8.42□□□□□ -1.06
MSH6-215ENST00000622629 NUPR2A6NF83 97 aa8.41□□□□□ -1.06
MSH6-215ENST00000622629 Q8N377 158 aa8.41□□□□□ -1.06
MSH6-215ENST00000622629 NBPF19A0A087WUL8 3843 aa8.41□□□□□ -1.06
MSH6-215ENST00000622629 HCG22E2RYF7 251 aa8.41□□□□□ -1.06
MSH6-215ENST00000622629 CASC2Q6XLA1 102 aa8.4□□□□□ -1.06
MSH6-215ENST00000622629 BCE1O60756 84 aa8.4□□□□□ -1.06
MSH6-215ENST00000622629 IGLV1-50A0A075B6I6 118 aa8.4□□□□□ -1.07
MSH6-215ENST00000622629 A0A0G2JQZ4 141 aa8.39□□□□□ -1.07
MSH6-215ENST00000622629 A0A1W2PNN7 141 aa8.39□□□□□ -1.07
MSH6-215ENST00000622629 K7EIL1 84 aa8.39□□□□□ -1.07
MSH6-215ENST00000622629 CSMD2Q7Z408 3487 aa8.37□□□□□ -1.07
MSH6-215ENST00000622629 C16orf90A8MZG2 172 aa8.37□□□□□ -1.07
MSH6-215ENST00000622629 EPM2AB3EWF7 344 aa8.35□□□□□ -1.07
MSH6-215ENST00000622629 CYSTM1Q9H1C7 97 aa8.35□□□□□ -1.07
MSH6-215ENST00000622629 IGHV6-1A0A0B4J1U7 121 aa8.35□□□□□ -1.07
MSH6-215ENST00000622629 ERC2-IT1O76042 136 aa8.34□□□□□ -1.07
MSH6-215ENST00000622629 RPL37AP61513 92 aaKnown RBP8.34□□□□□ -1.07
MSH6-215ENST00000622629 K7EQZ3 153 aa8.33□□□□□ -1.08
MSH6-215ENST00000622629 H0Y9P7 68 aa8.33□□□□□ -1.08
MSH6-215ENST00000622629 CIRBP-AS1Q8TBR5 109 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms