RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 LINC00588Q9Y4M8 146 aa6.24□□□□□ -1.41
IGHV3-54-201ENST00000622166 A0A1B0GW54 56 aa6.23□□□□□ -1.41
IGHV3-54-201ENST00000622166 KRTAP4-16G5E9R7 235 aaPredicted RBP6.23□□□□□ -1.41
IGHV3-54-201ENST00000622166 Q8N377 158 aa6.23□□□□□ -1.41
IGHV3-54-201ENST00000622166 DPH3Q96FX2 82 aa6.23□□□□□ -1.41
IGHV3-54-201ENST00000622166 HIVEP1P15822 2718 aa6.22□□□□□ -1.41
IGHV3-54-201ENST00000622166 IGLV1-50A0A075B6I6 118 aa6.22□□□□□ -1.41
IGHV3-54-201ENST00000622166 IGLV5-48A0A075B6I7 105 aa6.22□□□□□ -1.41
IGHV3-54-201ENST00000622166 TM2D3Q9BRN9 247 aa6.22□□□□□ -1.41
IGHV3-54-201ENST00000622166 Q6ZRX8 168 aa6.21□□□□□ -1.42
IGHV3-54-201ENST00000622166 FLNBO75369 2602 aaKnown RBP6.2□□□□□ -1.42
IGHV3-54-201ENST00000622166 ATRQ13535 2644 aa6.2□□□□□ -1.42
IGHV3-54-201ENST00000622166 HECTD1Q9ULT8 2610 aa6.2□□□□□ -1.42
IGHV3-54-201ENST00000622166 CASC10Q5T4H9 136 aa6.2□□□□□ -1.42
IGHV3-54-201ENST00000622166 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
IGHV3-54-201ENST00000622166 C20orf197Q8N268 126 aa6.2□□□□□ -1.42
IGHV3-54-201ENST00000622166 ETDCA0A1B0GVM5 59 aa6.19□□□□□ -1.42
IGHV3-54-201ENST00000622166 TNP2Q05952 138 aa6.19□□□□□ -1.42
IGHV3-54-201ENST00000622166 KLKP1Q107X0 134 aa6.19□□□□□ -1.42
IGHV3-54-201ENST00000622166 SCXQ7RTU7 201 aa6.19□□□□□ -1.42
IGHV3-54-201ENST00000622166 IGKV4-1P06312 121 aa6.18□□□□□ -1.42
IGHV3-54-201ENST00000622166 NREPQ16612 68 aa6.18□□□□□ -1.42
IGHV3-54-201ENST00000622166 Q9BRP9 147 aa6.18□□□□□ -1.42
IGHV3-54-201ENST00000622166 FAM168BA1KXE4 195 aa6.17□□□□□ -1.42
IGHV3-54-201ENST00000622166 ERC2-IT1O76042 136 aa6.17□□□□□ -1.42
IGHV3-54-201ENST00000622166 DEFB105AQ8NG35 78 aa6.17□□□□□ -1.42
IGHV3-54-201ENST00000622166 RPL37AP8A6NKH3 93 aa6.16□□□□□ -1.42
IGHV3-54-201ENST00000622166 H7BZZ5 65 aa6.16□□□□□ -1.42
IGHV3-54-201ENST00000622166 K7EIL1 84 aa6.16□□□□□ -1.42
IGHV3-54-201ENST00000622166 FAM19A5Q7Z5A7 132 aaPredicted RBP6.16□□□□□ -1.42
IGHV3-54-201ENST00000622166 MRPL55Q7Z7F7 128 aaKnown RBP6.16□□□□□ -1.42
IGHV3-54-201ENST00000622166 FAM236DA0A1B0GTK5 79 aa6.15□□□□□ -1.42
IGHV3-54-201ENST00000622166 A0A1W2PNM2 257 aa6.15□□□□□ -1.42
IGHV3-54-201ENST00000622166 BPY2O14599 106 aa6.15□□□□□ -1.42
IGHV3-54-201ENST00000622166 FAM236CP0DP71 79 aa6.15□□□□□ -1.42
IGHV3-54-201ENST00000622166 Q8NBF4 154 aa6.15□□□□□ -1.42
IGHV3-54-201ENST00000622166 EPM2AB3EWF7 344 aa6.14□□□□□ -1.43
IGHV3-54-201ENST00000622166 NDUFC1O43677 76 aa6.14□□□□□ -1.43
IGHV3-54-201ENST00000622166 OXTP01178 125 aa6.14□□□□□ -1.43
IGHV3-54-201ENST00000622166 FUSP35637 526 aaKnown RBP eCLIP6.14□□□□□ -1.43
IGHV3-54-201ENST00000622166 C1orf137Q5JT78 98 aa6.14□□□□□ -1.43
IGHV3-54-201ENST00000622166 SPRR4Q96PI1 79 aa6.14□□□□□ -1.43
IGHV3-54-201ENST00000622166 REG3GQ6UW15 175 aa6.13□□□□□ -1.43
IGHV3-54-201ENST00000622166 ST20-AS1Q8NBB2 130 aa6.13□□□□□ -1.43
IGHV3-54-201ENST00000622166 MAST4O15021 2626 aa6.12□□□□□ -1.43
IGHV3-54-201ENST00000622166 C3orf84H3BNL1 204 aa6.12□□□□□ -1.43
IGHV3-54-201ENST00000622166 CNBPP62633 177 aaKnown RBP6.12□□□□□ -1.43
IGHV3-54-201ENST00000622166 OCR1Q9BZK8 76 aa6.12□□□□□ -1.43
IGHV3-54-201ENST00000622166 SERP1Q9Y6X1 66 aa6.12□□□□□ -1.43
IGHV3-54-201ENST00000622166 DNAH3Q8TD57 4116 aa6.11□□□□□ -1.43
IGHV3-54-201ENST00000622166 PRB2P02812 416 aaPredicted RBP6.11□□□□□ -1.43
IGHV3-54-201ENST00000622166 SMIM29Q86T20 159 aa6.11□□□□□ -1.43
IGHV3-54-201ENST00000622166 Q8N9L7 120 aa6.11□□□□□ -1.43
IGHV3-54-201ENST00000622166 TENM3Q9P273 2699 aa6.1□□□□□ -1.43
IGHV3-54-201ENST00000622166 C16orf90A8MZG2 172 aa6.1□□□□□ -1.43
IGHV3-54-201ENST00000622166 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
IGHV3-54-201ENST00000622166 UBE2BP63146 152 aa6.1□□□□□ -1.43
IGHV3-54-201ENST00000622166 SNURFQ9Y675 71 aa6.1□□□□□ -1.43
IGHV3-54-201ENST00000622166 IGLV8-61A0A075B6I0 122 aa6.09□□□□□ -1.43
IGHV3-54-201ENST00000622166 F8P00451 2351 aa6.09□□□□□ -1.43
IGHV3-54-201ENST00000622166 A0A096LNI7 61 aa6.08□□□□□ -1.44
IGHV3-54-201ENST00000622166 A0A0U1RQV1 116 aa6.08□□□□□ -1.44
IGHV3-54-201ENST00000622166 F8WEM9 126 aa6.08□□□□□ -1.44
IGHV3-54-201ENST00000622166 TMEM254Q8TBM7 123 aa6.08□□□□□ -1.44
IGHV3-54-201ENST00000622166 CMYA5Q8N3K9 4069 aa6.07□□□□□ -1.44
IGHV3-54-201ENST00000622166 C14orf177Q52M58 125 aa6.07□□□□□ -1.44
IGHV3-54-201ENST00000622166 KRTAP1-5Q9BYS1 174 aa6.07□□□□□ -1.44
IGHV3-54-201ENST00000622166 APLNQ9ULZ1 77 aa6.07□□□□□ -1.44
IGHV3-54-201ENST00000622166 LCE6AA0A183 80 aa6.06□□□□□ -1.44
IGHV3-54-201ENST00000622166 A0A1W2PNN7 141 aa6.06□□□□□ -1.44
IGHV3-54-201ENST00000622166 DSCR10P59022 87 aa6.06□□□□□ -1.44
IGHV3-54-201ENST00000622166 Q5XG85 94 aa6.06□□□□□ -1.44
IGHV3-54-201ENST00000622166 LINC00476Q8WZB0 136 aa6.06□□□□□ -1.44
IGHV3-54-201ENST00000622166 TRRAPQ9Y4A5 3859 aa6.05□□□□□ -1.44
IGHV3-54-201ENST00000622166 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
IGHV3-54-201ENST00000622166 H0Y9J4 135 aa6.04□□□□□ -1.44
IGHV3-54-201ENST00000622166 SPRR1BP22528 89 aa6.04□□□□□ -1.44
IGHV3-54-201ENST00000622166 IGFL1Q6UW32 110 aa6.04□□□□□ -1.44
IGHV3-54-201ENST00000622166 PKIGQ9Y2B9 76 aa6.04□□□□□ -1.44
IGHV3-54-201ENST00000622166 DNAH1Q9P2D7 4330 aa6.04□□□□□ -1.44
IGHV3-54-201ENST00000622166 PKD1L1Q8TDX9 2849 aa6.03□□□□□ -1.44
IGHV3-54-201ENST00000622166 PSCAO43653 123 aa6.03□□□□□ -1.44
IGHV3-54-201ENST00000622166 UBE2DNLQ8IWF7 75 aa6.02□□□□□ -1.45
IGHV3-54-201ENST00000622166 SMIM26A0A096LP01 95 aa6.01□□□□□ -1.45
IGHV3-54-201ENST00000622166 IGKV2-24A0A0C4DH68 120 aa6.01□□□□□ -1.45
IGHV3-54-201ENST00000622166 PRLHP81277 87 aa6.01□□□□□ -1.45
IGHV3-54-201ENST00000622166 K7EQZ3 153 aa6□□□□□ -1.45
IGHV3-54-201ENST00000622166 C9orf163Q8N9P6 203 aa6□□□□□ -1.45
IGHV3-54-201ENST00000622166 FAM30AQ9NZY2 134 aa6□□□□□ -1.45
IGHV3-54-201ENST00000622166 FBN1P35555 2871 aaKnown RBP5.99□□□□□ -1.45
IGHV3-54-201ENST00000622166 LRCOL1A6NCL2 159 aa5.99□□□□□ -1.45
IGHV3-54-201ENST00000622166 UBE2AP49459 152 aa5.99□□□□□ -1.45
IGHV3-54-201ENST00000622166 C4orf26Q17RF5 130 aa5.99□□□□□ -1.45
IGHV3-54-201ENST00000622166 PHF5AQ7RTV0 110 aaKnown RBP5.99□□□□□ -1.45
IGHV3-54-201ENST00000622166 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
IGHV3-54-201ENST00000622166 ZCCHC13Q8WW36 166 aaKnown RBP5.99□□□□□ -1.45
IGHV3-54-201ENST00000622166 HIGD2AQ9BW72 106 aa5.99□□□□□ -1.45
IGHV3-54-201ENST00000622166 HUWE1Q7Z6Z7 4374 aaKnown RBP5.99□□□□□ -1.45
IGHV3-54-201ENST00000622166 HCG22E2RYF7 251 aa5.98□□□□□ -1.45
IGHV3-54-201ENST00000622166 B9D2Q9BPU9 175 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms