RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 LYRM7Q5U5X0 104 aa10.12□□□□□ -0.79
CD40-207ENST00000620709 PSMB2P49721 201 aa10.11□□□□□ -0.79
CD40-207ENST00000620709 A0A096LNI7 61 aa10.1□□□□□ -0.79
CD40-207ENST00000620709 NCR3O14931 201 aa10.1□□□□□ -0.79
CD40-207ENST00000620709 Q8NDZ9 215 aa10.1□□□□□ -0.79
CD40-207ENST00000620709 PKIGQ9Y2B9 76 aa10.1□□□□□ -0.79
CD40-207ENST00000620709 TRBV10-2A0A0K0K1G8 114 aa10.09□□□□□ -0.79
CD40-207ENST00000620709 C9orf129Q5T035 196 aaKnown RBP10.09□□□□□ -0.79
CD40-207ENST00000620709 OR13C6PQ8NH95 151 aa10.09□□□□□ -0.79
CD40-207ENST00000620709 VPREB1P12018 145 aa10.08□□□□□ -0.8
CD40-207ENST00000620709 GAGE2BQ13066 116 aa10.08□□□□□ -0.8
CD40-207ENST00000620709 SPCS1Q9Y6A9 102 aa10.08□□□□□ -0.8
CD40-207ENST00000620709 PRR3P79522 188 aaKnown RBP10.07□□□□□ -0.8
CD40-207ENST00000620709 TRIAP1O43715 76 aa10.07□□□□□ -0.8
CD40-207ENST00000620709 SCGB1C2P0DMR2 95 aa10.07□□□□□ -0.8
CD40-207ENST00000620709 TMEM126AQ9H061 195 aa10.07□□□□□ -0.8
CD40-207ENST00000620709 K7EP34 96 aa10.06□□□□□ -0.8
CD40-207ENST00000620709 COX6CP09669 75 aa10.06□□□□□ -0.8
CD40-207ENST00000620709 S100A7L2Q5SY68 101 aa10.06□□□□□ -0.8
CD40-207ENST00000620709 GTF2H5Q6ZYL4 71 aa10.06□□□□□ -0.8
CD40-207ENST00000620709 GAGE10A6NGK3 116 aa10.05□□□□□ -0.8
CD40-207ENST00000620709 LINC00474Q9P2X8 69 aa10.05□□□□□ -0.8
CD40-207ENST00000620709 UBR4Q5T4S7 5183 aa10.04□□□□□ -0.8
CD40-207ENST00000620709 MT1HL1P0DM35 61 aa10.04□□□□□ -0.8
CD40-207ENST00000620709 RPL28P46779 137 aaKnown RBP10.04□□□□□ -0.8
CD40-207ENST00000620709 M0R378 163 aa10.03□□□□□ -0.8
CD40-207ENST00000620709 NKAPP1Q8N9T2 125 aa10.03□□□□□ -0.8
CD40-207ENST00000620709 SMIM11BQ8TCY0 68 aa10.03□□□□□ -0.8
CD40-207ENST00000620709 UBE2V1Q13404 147 aa10.02□□□□□ -0.8
CD40-207ENST00000620709 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
CD40-207ENST00000620709 TRBV20-1A0A075B6N2 111 aa10.02□□□□□ -0.81
CD40-207ENST00000620709 IGLV6-57P01721 117 aa10.02□□□□□ -0.81
CD40-207ENST00000620709 TNXBP22105 4242 aa10□□□□□ -0.81
CD40-207ENST00000620709 TRBV10-3A0A0K0K1G6 114 aa9.99□□□□□ -0.81
CD40-207ENST00000620709 FAM168BA1KXE4 195 aa9.99□□□□□ -0.81
CD40-207ENST00000620709 TCL1BO95988 128 aa9.99□□□□□ -0.81
CD40-207ENST00000620709 CBY1Q9Y3M2 126 aa9.99□□□□□ -0.81
CD40-207ENST00000620709 ATXN8Q156A1 80 aa9.97□□□□□ -0.81
CD40-207ENST00000620709 FAM19A5Q7Z5A7 132 aaPredicted RBP9.97□□□□□ -0.81
CD40-207ENST00000620709 TRAV23DV6A0A075B6W5 121 aa9.97□□□□□ -0.81
CD40-207ENST00000620709 H0YGX0 51 aa9.96□□□□□ -0.82
CD40-207ENST00000620709 H3BMG7 143 aa9.96□□□□□ -0.82
CD40-207ENST00000620709 KRTAP7-1Q8IUC3 87 aa9.96□□□□□ -0.82
CD40-207ENST00000620709 CLEC2BQ92478 149 aa9.96□□□□□ -0.82
CD40-207ENST00000620709 C22orf24Q9Y442 160 aa9.96□□□□□ -0.82
CD40-207ENST00000620709 C6orf99Q4VX62 202 aa9.95□□□□□ -0.82
CD40-207ENST00000620709 A0A1W2PNN7 141 aa9.94□□□□□ -0.82
CD40-207ENST00000620709 LST1O00453 97 aa9.94□□□□□ -0.82
CD40-207ENST00000620709 SPINK6Q6UWN8 80 aa9.94□□□□□ -0.82
CD40-207ENST00000620709 MRPL55Q7Z7F7 128 aaKnown RBP9.94□□□□□ -0.82
CD40-207ENST00000620709 LINC01600Q96MT4 127 aa9.94□□□□□ -0.82
CD40-207ENST00000620709 M0QXV9 152 aa9.93□□□□□ -0.82
CD40-207ENST00000620709 REG3GQ6UW15 175 aa9.93□□□□□ -0.82
CD40-207ENST00000620709 DIRC1Q969H9 104 aa9.93□□□□□ -0.82
CD40-207ENST00000620709 ZNF73O43830 326 aaPredicted RBP9.92□□□□□ -0.82
CD40-207ENST00000620709 LINC00167Q96N53 147 aa9.92□□□□□ -0.82
CD40-207ENST00000620709 KCNQ1DNQ9H478 68 aa9.91□□□□□ -0.82
CD40-207ENST00000620709 IGLV1-50A0A075B6I6 118 aa9.9□□□□□ -0.82
CD40-207ENST00000620709 PRYO14603 147 aa9.9□□□□□ -0.82
CD40-207ENST00000620709 PHF5AQ7RTV0 110 aaKnown RBP9.9□□□□□ -0.82
CD40-207ENST00000620709 FAM218AQ96MZ4 157 aa9.9□□□□□ -0.82
CD40-207ENST00000620709 TRBV7-6A0A0J9YX20 115 aa9.89□□□□□ -0.83
CD40-207ENST00000620709 RPL37AP8A6NKH3 93 aa9.89□□□□□ -0.83
CD40-207ENST00000620709 TRACP01848 142 aa9.89□□□□□ -0.83
CD40-207ENST00000620709 F8W1H4 67 aa9.88□□□□□ -0.83
CD40-207ENST00000620709 PSORS1C2Q9UIG4 136 aa9.88□□□□□ -0.83
CD40-207ENST00000620709 A0A1B0GX51 115 aa9.87□□□□□ -0.83
CD40-207ENST00000620709 C9JAW5 83 aa9.87□□□□□ -0.83
CD40-207ENST00000620709 C1orf137Q5JT78 98 aa9.87□□□□□ -0.83
CD40-207ENST00000620709 COX7BP24311 80 aa9.87□□□□□ -0.83
CD40-207ENST00000620709 MTURNQ8N3F0 131 aa9.87□□□□□ -0.83
CD40-207ENST00000620709 PRO0461Q9UI25 63 aa9.87□□□□□ -0.83
CD40-207ENST00000620709 SNCGO76070 127 aa9.86□□□□□ -0.83
CD40-207ENST00000620709 DNAL4O96015 105 aa9.86□□□□□ -0.83
CD40-207ENST00000620709 ELOF1P60002 83 aaKnown RBP9.86□□□□□ -0.83
CD40-207ENST00000620709 LRP2P98164 4655 aa9.85□□□□□ -0.83
CD40-207ENST00000620709 LINC00575Q6W349 94 aa9.85□□□□□ -0.83
CD40-207ENST00000620709 SLC25A20O43772 301 aa9.84□□□□□ -0.83
CD40-207ENST00000620709 SPRR1AP35321 89 aa9.84□□□□□ -0.83
CD40-207ENST00000620709 KRTAP10-8P60410 259 aa9.84□□□□□ -0.83
CD40-207ENST00000620709 UBE2BP63146 152 aa9.83□□□□□ -0.84
CD40-207ENST00000620709 ETDCA0A1B0GVM5 59 aa9.82□□□□□ -0.84
CD40-207ENST00000620709 hADV29S1A0JD25 119 aa9.82□□□□□ -0.84
CD40-207ENST00000620709 H3BT86 120 aa9.82□□□□□ -0.84
CD40-207ENST00000620709 SMCPP49901 116 aaPredicted RBP9.81□□□□□ -0.84
CD40-207ENST00000620709 ANKRD29Q8N6D5 301 aa9.81□□□□□ -0.84
CD40-207ENST00000620709 KRTAP4-16G5E9R7 235 aaPredicted RBP9.8□□□□□ -0.84
CD40-207ENST00000620709 B5MCH6 92 aa9.78□□□□□ -0.84
CD40-207ENST00000620709 Q6ZRX8 168 aa9.78□□□□□ -0.84
CD40-207ENST00000620709 IGLV7-43P04211 117 aa9.77□□□□□ -0.84
CD40-207ENST00000620709 KRTAP11-1Q8IUC1 163 aa9.77□□□□□ -0.84
CD40-207ENST00000620709 ORMDL1Q9P0S3 153 aa9.77□□□□□ -0.84
CD40-207ENST00000620709 BAALC-AS2P0C853 105 aa9.76□□□□□ -0.85
CD40-207ENST00000620709 DHRS4-AS1Q9P1J3 65 aa9.76□□□□□ -0.85
CD40-207ENST00000620709 ETDBQ3ZM63 59 aa9.75□□□□□ -0.85
CD40-207ENST00000620709 FAM19A1Q7Z5A9 133 aa9.75□□□□□ -0.85
CD40-207ENST00000620709 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.74□□□□□ -0.85
CD40-207ENST00000620709 Q6ZQY7 126 aa9.73□□□□□ -0.85
CD40-207ENST00000620709 TEN1Q86WV5 123 aa9.73□□□□□ -0.85
CD40-207ENST00000620709 PRR26Q8N8Z3 221 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms