RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TRGV4A0A0C4DH28 118 aa6.99□□□□□ -1.29
VPS11-207ENST00000620429 DIRC1Q969H9 104 aa6.99□□□□□ -1.29
VPS11-207ENST00000620429 HCG22E2RYF7 251 aa6.99□□□□□ -1.29
VPS11-207ENST00000620429 COX17Q14061 63 aa6.99□□□□□ -1.29
VPS11-207ENST00000620429 KRTAP24-1Q3LI83 254 aa6.99□□□□□ -1.29
VPS11-207ENST00000620429 Q8IZM0 81 aa6.99□□□□□ -1.29
VPS11-207ENST00000620429 LINC00612Q8N6U2 182 aa6.99□□□□□ -1.29
VPS11-207ENST00000620429 LIMD2Q9BT23 127 aa6.99□□□□□ -1.29
VPS11-207ENST00000620429 CHKB-CPT1BH3BT56 60 aa6.98□□□□□ -1.29
VPS11-207ENST00000620429 C7orf65Q6ZTY9 151 aa6.98□□□□□ -1.29
VPS11-207ENST00000620429 CCL24O00175 119 aa6.97□□□□□ -1.29
VPS11-207ENST00000620429 SPTSSBQ8NFR3 76 aa6.97□□□□□ -1.29
VPS11-207ENST00000620429 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.96□□□□□ -1.29
VPS11-207ENST00000620429 FAM30AQ9NZY2 134 aa6.96□□□□□ -1.29
VPS11-207ENST00000620429 LCA10Q71F78 164 aa6.96□□□□□ -1.3
VPS11-207ENST00000620429 C16orf74Q96GX8 76 aa6.96□□□□□ -1.3
VPS11-207ENST00000620429 LINC00959A0A1B0GUT2 108 aa6.95□□□□□ -1.3
VPS11-207ENST00000620429 SMIM29Q86T20 159 aa6.95□□□□□ -1.3
VPS11-207ENST00000620429 Q8N9P0 234 aaPredicted RBP6.95□□□□□ -1.3
VPS11-207ENST00000620429 H3BS24 57 aa6.94□□□□□ -1.3
VPS11-207ENST00000620429 WFDC10AQ9H1F0 79 aa6.94□□□□□ -1.3
VPS11-207ENST00000620429 GIG44P09565 113 aaPredicted RBP6.94□□□□□ -1.3
VPS11-207ENST00000620429 NDUFB1O75438 58 aa6.93□□□□□ -1.3
VPS11-207ENST00000620429 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
VPS11-207ENST00000620429 Q75L30 129 aa6.93□□□□□ -1.3
VPS11-207ENST00000620429 CELA1Q9UNI1 258 aa6.93□□□□□ -1.3
VPS11-207ENST00000620429 FBN1P35555 2871 aaKnown RBP6.93□□□□□ -1.3
VPS11-207ENST00000620429 CLPSL2Q6UWE3 100 aa6.93□□□□□ -1.3
VPS11-207ENST00000620429 Q8NDZ9 215 aa6.93□□□□□ -1.3
VPS11-207ENST00000620429 IGLV6-57P01721 117 aa6.92□□□□□ -1.3
VPS11-207ENST00000620429 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.92□□□□□ -1.3
VPS11-207ENST00000620429 IGHV4-30-4P0DP06 118 aa6.92□□□□□ -1.3
VPS11-207ENST00000620429 C10orf25Q5T742 122 aa6.92□□□□□ -1.3
VPS11-207ENST00000620429 ANK2Q01484 3957 aa6.92□□□□□ -1.3
VPS11-207ENST00000620429 ETDCA0A1B0GVM5 59 aa6.92□□□□□ -1.3
VPS11-207ENST00000620429 COL6A5A8TX70 2615 aa6.91□□□□□ -1.3
VPS11-207ENST00000620429 IGHV4-28A0A0C4DH34 117 aa6.91□□□□□ -1.3
VPS11-207ENST00000620429 CDC42SE1Q9NRR8 79 aa6.91□□□□□ -1.3
VPS11-207ENST00000620429 LOC101927531A0A1B0GV80 90 aa6.9□□□□□ -1.3
VPS11-207ENST00000620429 PRR15LQ9BU68 103 aa6.9□□□□□ -1.3
VPS11-207ENST00000620429 DEFB130BP0DP73 79 aa6.9□□□□□ -1.31
VPS11-207ENST00000620429 DEFB130AP0DP74 79 aa6.9□□□□□ -1.31
VPS11-207ENST00000620429 KRTAP10-3P60369 221 aa6.9□□□□□ -1.31
VPS11-207ENST00000620429 VWFP04275 2813 aa6.89□□□□□ -1.31
VPS11-207ENST00000620429 HIGD2BQ4VC39 106 aa6.89□□□□□ -1.31
VPS11-207ENST00000620429 OXLD1Q5BKU9 147 aa6.89□□□□□ -1.31
VPS11-207ENST00000620429 B9D2Q9BPU9 175 aa6.89□□□□□ -1.31
VPS11-207ENST00000620429 KIAA0087Q14695 138 aa6.89□□□□□ -1.31
VPS11-207ENST00000620429 PRR4Q16378 134 aa6.89□□□□□ -1.31
VPS11-207ENST00000620429 Q9BRP9 147 aa6.89□□□□□ -1.31
VPS11-207ENST00000620429 GYPEP15421 78 aa6.88□□□□□ -1.31
VPS11-207ENST00000620429 A0A096LPF7 62 aa6.87□□□□□ -1.31
VPS11-207ENST00000620429 A6NED7 52 aa6.87□□□□□ -1.31
VPS11-207ENST00000620429 CMC4P56277 68 aaPredicted RBP6.87□□□□□ -1.31
VPS11-207ENST00000620429 C9orf116Q5BN46 136 aaPredicted RBP6.87□□□□□ -1.31
VPS11-207ENST00000620429 CSNK1G2-AS1Q8NCQ2 148 aa6.87□□□□□ -1.31
VPS11-207ENST00000620429 KLK12Q9UKR0 248 aa6.87□□□□□ -1.31
VPS11-207ENST00000620429 VPREB1P12018 145 aa6.87□□□□□ -1.31
VPS11-207ENST00000620429 ATRQ13535 2644 aa6.87□□□□□ -1.31
VPS11-207ENST00000620429 TENM1Q9UKZ4 2725 aa6.86□□□□□ -1.31
VPS11-207ENST00000620429 A0A1B0GUV1 79 aa6.86□□□□□ -1.31
VPS11-207ENST00000620429 A0A1B0GW54 56 aa6.86□□□□□ -1.31
VPS11-207ENST00000620429 IGLV1-51P01701 117 aa6.86□□□□□ -1.31
VPS11-207ENST00000620429 SPANXA2-OT1Q8N9U9 137 aa6.86□□□□□ -1.31
VPS11-207ENST00000620429 LINC00208Q96KT6 92 aa6.86□□□□□ -1.31
VPS11-207ENST00000620429 C19orf73Q9NVV2 129 aa6.86□□□□□ -1.31
VPS11-207ENST00000620429 NKAPP1Q8N9T2 125 aa6.85□□□□□ -1.31
VPS11-207ENST00000620429 IGLV10-54A0A075B6I4 117 aa6.85□□□□□ -1.31
VPS11-207ENST00000620429 ST20-AS1Q8NBB2 130 aa6.85□□□□□ -1.31
VPS11-207ENST00000620429 NBEAL2Q6ZNJ1 2754 aa6.84□□□□□ -1.31
VPS11-207ENST00000620429 MOBPQ13875 183 aa6.84□□□□□ -1.31
VPS11-207ENST00000620429 STAB1Q9NY15 2570 aa6.84□□□□□ -1.31
VPS11-207ENST00000620429 CHCHD10Q8WYQ3 142 aaPredicted RBP6.83□□□□□ -1.32
VPS11-207ENST00000620429 C3orf84H3BNL1 204 aa6.83□□□□□ -1.32
VPS11-207ENST00000620429 KCNQ1DNQ9H478 68 aa6.82□□□□□ -1.32
VPS11-207ENST00000620429 PRB2P02812 416 aaPredicted RBP6.82□□□□□ -1.32
VPS11-207ENST00000620429 ANGP03950 147 aaKnown RBP6.82□□□□□ -1.32
VPS11-207ENST00000620429 PRO0255Q9UI72 69 aa6.81□□□□□ -1.32
VPS11-207ENST00000620429 TRRAPQ9Y4A5 3859 aa6.8□□□□□ -1.32
VPS11-207ENST00000620429 REG3AQ06141 175 aa6.79□□□□□ -1.32
VPS11-207ENST00000620429 UNQ6190/PRO20217Q6UXQ8 127 aa6.79□□□□□ -1.32
VPS11-207ENST00000620429 MP68P56378 58 aa6.78□□□□□ -1.32
VPS11-207ENST00000620429 DSCR10P59022 87 aa6.78□□□□□ -1.32
VPS11-207ENST00000620429 PRR26Q8N8Z3 221 aa6.78□□□□□ -1.32
VPS11-207ENST00000620429 IGLV5-48A0A075B6I7 105 aa6.78□□□□□ -1.32
VPS11-207ENST00000620429 A0A0J9YWU9 116 aa6.78□□□□□ -1.32
VPS11-207ENST00000620429 SPAG11BQ08648 103 aa6.78□□□□□ -1.32
VPS11-207ENST00000620429 LINC00528Q8N1L1 170 aa6.77□□□□□ -1.33
VPS11-207ENST00000620429 H3BPC8 53 aa6.76□□□□□ -1.33
VPS11-207ENST00000620429 LINC01554Q52M75 96 aa6.76□□□□□ -1.33
VPS11-207ENST00000620429 PLAC8Q9NZF1 115 aa6.76□□□□□ -1.33
VPS11-207ENST00000620429 KPRPQ5T749 579 aaPredicted RBP6.75□□□□□ -1.33
VPS11-207ENST00000620429 K7EQZ3 153 aa6.75□□□□□ -1.33
VPS11-207ENST00000620429 X6R8D5 127 aa6.75□□□□□ -1.33
VPS11-207ENST00000620429 DEFB4AO15263 64 aa6.74□□□□□ -1.33
VPS11-207ENST00000620429 LINC00313P59037 77 aa6.74□□□□□ -1.33
VPS11-207ENST00000620429 LINC01558Q9Y6Z2 57 aa6.74□□□□□ -1.33
VPS11-207ENST00000620429 XAGE1AQ9HD64 81 aa6.73□□□□□ -1.33
VPS11-207ENST00000620429 A0A1W2PNM2 257 aa6.73□□□□□ -1.33
VPS11-207ENST00000620429 GVQW2A0A096LPI5 108 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms