RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 PRO0255Q9UI72 69 aa7.28□□□□□ -1.24
UPF3A-212ENST00000619079 GVQW2A0A096LPI5 108 aaPredicted RBP7.27□□□□□ -1.25
UPF3A-212ENST00000619079 ANGP03950 147 aaKnown RBP7.27□□□□□ -1.25
UPF3A-212ENST00000619079 UNQ6190/PRO20217Q6UXQ8 127 aa7.27□□□□□ -1.25
UPF3A-212ENST00000619079 IGLV10-54A0A075B6I4 117 aa7.26□□□□□ -1.25
UPF3A-212ENST00000619079 hDV103S1A0JD37 113 aa7.25□□□□□ -1.25
UPF3A-212ENST00000619079 Q1T7F1 81 aa7.25□□□□□ -1.25
UPF3A-212ENST00000619079 HIGD2BQ4VC39 106 aa7.25□□□□□ -1.25
UPF3A-212ENST00000619079 C10orf25Q5T742 122 aa7.25□□□□□ -1.25
UPF3A-212ENST00000619079 Q8N9L7 120 aa7.25□□□□□ -1.25
UPF3A-212ENST00000619079 HIGD2AQ9BW72 106 aa7.25□□□□□ -1.25
UPF3A-212ENST00000619079 CELA1Q9UNI1 258 aa7.24□□□□□ -1.25
UPF3A-212ENST00000619079 Q6ZRU5 148 aa7.23□□□□□ -1.25
UPF3A-212ENST00000619079 WFDC10AQ9H1F0 79 aa7.23□□□□□ -1.25
UPF3A-212ENST00000619079 C19orf73Q9NVV2 129 aa7.23□□□□□ -1.25
UPF3A-212ENST00000619079 PKD1L1Q8TDX9 2849 aa7.23□□□□□ -1.25
UPF3A-212ENST00000619079 A0A1B0GW54 56 aa7.23□□□□□ -1.25
UPF3A-212ENST00000619079 PMAIP1Q13794 54 aa7.23□□□□□ -1.25
UPF3A-212ENST00000619079 LCE6AA0A183 80 aa7.22□□□□□ -1.25
UPF3A-212ENST00000619079 MGAM2Q2M2H8 2515 aa7.22□□□□□ -1.25
UPF3A-212ENST00000619079 A0A096LPF7 62 aa7.21□□□□□ -1.25
UPF3A-212ENST00000619079 IGLV1-51P01701 117 aa7.21□□□□□ -1.26
UPF3A-212ENST00000619079 CMYA5Q8N3K9 4069 aa7.21□□□□□ -1.26
UPF3A-212ENST00000619079 LINC00528Q8N1L1 170 aa7.2□□□□□ -1.26
UPF3A-212ENST00000619079 DAD1P61803 113 aa7.2□□□□□ -1.26
UPF3A-212ENST00000619079 M0R378 163 aa7.19□□□□□ -1.26
UPF3A-212ENST00000619079 XAGE1AQ9HD64 81 aa7.19□□□□□ -1.26
UPF3A-212ENST00000619079 C6orf48Q9UBA6 75 aa7.18□□□□□ -1.26
UPF3A-212ENST00000619079 LYRM9A8MSI8 78 aa7.18□□□□□ -1.26
UPF3A-212ENST00000619079 Q6ZRP5 223 aa7.18□□□□□ -1.26
UPF3A-212ENST00000619079 SMIM29Q86T20 159 aa7.18□□□□□ -1.26
UPF3A-212ENST00000619079 C1orf64Q8NEQ6 169 aa7.18□□□□□ -1.26
UPF3A-212ENST00000619079 VPREB1P12018 145 aa7.17□□□□□ -1.26
UPF3A-212ENST00000619079 C3orf84H3BNL1 204 aa7.17□□□□□ -1.26
UPF3A-212ENST00000619079 FAM30AQ9NZY2 134 aa7.17□□□□□ -1.26
UPF3A-212ENST00000619079 ZCCHC13Q8WW36 166 aaKnown RBP7.16□□□□□ -1.26
UPF3A-212ENST00000619079 PRR34Q9NV39 138 aa7.16□□□□□ -1.26
UPF3A-212ENST00000619079 PRB2P02812 416 aaPredicted RBP7.16□□□□□ -1.26
UPF3A-212ENST00000619079 CYP4F30PQ9H0H9 118 aa7.16□□□□□ -1.26
UPF3A-212ENST00000619079 KLK12Q9UKR0 248 aa7.16□□□□□ -1.26
UPF3A-212ENST00000619079 NOTCH1P46531 2555 aa7.15□□□□□ -1.26
UPF3A-212ENST00000619079 IGLV5-48A0A075B6I7 105 aa7.15□□□□□ -1.26
UPF3A-212ENST00000619079 ETDCA0A1B0GVM5 59 aa7.15□□□□□ -1.27
UPF3A-212ENST00000619079 KRTAP10-11P60412 298 aa7.15□□□□□ -1.27
UPF3A-212ENST00000619079 NDUFB1O75438 58 aa7.14□□□□□ -1.27
UPF3A-212ENST00000619079 EGFEM1PQ0D2K5 195 aa7.14□□□□□ -1.27
UPF3A-212ENST00000619079 KPRPQ5T749 579 aaPredicted RBP7.14□□□□□ -1.27
UPF3A-212ENST00000619079 LELP1Q5T871 98 aa7.14□□□□□ -1.27
UPF3A-212ENST00000619079 X6R8D5 127 aa7.14□□□□□ -1.27
UPF3A-212ENST00000619079 TRAV22A0A0B4J277 110 aa7.13□□□□□ -1.27
UPF3A-212ENST00000619079 NBEAL1Q6ZS30 2694 aa7.13□□□□□ -1.27
UPF3A-212ENST00000619079 CAMK2N2Q96S95 79 aa7.12□□□□□ -1.27
UPF3A-212ENST00000619079 LRCOL1A6NCL2 159 aa7.11□□□□□ -1.27
UPF3A-212ENST00000619079 PSPHP1O15172 72 aa7.1□□□□□ -1.27
UPF3A-212ENST00000619079 CD164Q04900 197 aa7.1□□□□□ -1.27
UPF3A-212ENST00000619079 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.09□□□□□ -1.27
UPF3A-212ENST00000619079 PSCAO43653 123 aa7.09□□□□□ -1.27
UPF3A-212ENST00000619079 Q8N377 158 aa7.09□□□□□ -1.27
UPF3A-212ENST00000619079 DHRS4-AS1Q9P1J3 65 aa7.08□□□□□ -1.28
UPF3A-212ENST00000619079 Q8NBF4 154 aa7.08□□□□□ -1.28
UPF3A-212ENST00000619079 KCNQ1DNQ9H478 68 aa7.08□□□□□ -1.28
UPF3A-212ENST00000619079 K7EIL1 84 aa7.07□□□□□ -1.28
UPF3A-212ENST00000619079 DEFB105AQ8NG35 78 aa7.07□□□□□ -1.28
UPF3A-212ENST00000619079 A0A1W2PNM2 257 aa7.07□□□□□ -1.28
UPF3A-212ENST00000619079 UBE2BP63146 152 aa7.07□□□□□ -1.28
UPF3A-212ENST00000619079 C1orf137Q5JT78 98 aa7.06□□□□□ -1.28
UPF3A-212ENST00000619079 SPRR4Q96PI1 79 aa7.06□□□□□ -1.28
UPF3A-212ENST00000619079 HCG22E2RYF7 251 aa7.06□□□□□ -1.28
UPF3A-212ENST00000619079 DNAH3Q8TD57 4116 aa7.05□□□□□ -1.28
UPF3A-212ENST00000619079 DSCR10P59022 87 aa7.05□□□□□ -1.28
UPF3A-212ENST00000619079 MP68P56378 58 aa7.05□□□□□ -1.28
UPF3A-212ENST00000619079 TNP2Q05952 138 aa7.05□□□□□ -1.28
UPF3A-212ENST00000619079 SYCNQ0VAF6 134 aa7.05□□□□□ -1.28
UPF3A-212ENST00000619079 NKAPP1Q8N9T2 125 aa7.05□□□□□ -1.28
UPF3A-212ENST00000619079 A8MUN3 132 aa7.04□□□□□ -1.28
UPF3A-212ENST00000619079 UBE2AP49459 152 aa7.04□□□□□ -1.28
UPF3A-212ENST00000619079 MEGF8Q7Z7M0 2845 aa7.04□□□□□ -1.28
UPF3A-212ENST00000619079 K7EQZ3 153 aa7.03□□□□□ -1.28
UPF3A-212ENST00000619079 LIMD2Q9BT23 127 aa7.03□□□□□ -1.28
UPF3A-212ENST00000619079 B9D2Q9BPU9 175 aa7.02□□□□□ -1.28
UPF3A-212ENST00000619079 FBN3Q75N90 2809 aa7.02□□□□□ -1.29
UPF3A-212ENST00000619079 Q6ZRX8 168 aa7.02□□□□□ -1.29
UPF3A-212ENST00000619079 SPANXA2-OT1Q8N9U9 137 aa7.02□□□□□ -1.29
UPF3A-212ENST00000619079 ST20-AS1Q8NBB2 130 aa7.02□□□□□ -1.29
UPF3A-212ENST00000619079 Q5VV11 94 aa7.01□□□□□ -1.29
UPF3A-212ENST00000619079 DEFB4AO15263 64 aa7.01□□□□□ -1.29
UPF3A-212ENST00000619079 SPART-AS1P0CW21 52 aa7.01□□□□□ -1.29
UPF3A-212ENST00000619079 APOC4P55056 127 aa7.01□□□□□ -1.29
UPF3A-212ENST00000619079 PRR4Q16378 134 aa7.01□□□□□ -1.29
UPF3A-212ENST00000619079 H3BPC8 53 aa7□□□□□ -1.29
UPF3A-212ENST00000619079 DEFB135Q30KP9 77 aa7□□□□□ -1.29
UPF3A-212ENST00000619079 MRPL55Q7Z7F7 128 aaKnown RBP7□□□□□ -1.29
UPF3A-212ENST00000619079 C15orf56Q8N910 161 aa7□□□□□ -1.29
UPF3A-212ENST00000619079 C7orf33Q8WU49 177 aa7□□□□□ -1.29
UPF3A-212ENST00000619079 HTN3P15516 51 aa6.99□□□□□ -1.29
UPF3A-212ENST00000619079 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
UPF3A-212ENST00000619079 Q9BRP9 147 aa6.99□□□□□ -1.29
UPF3A-212ENST00000619079 PRKDCP78527 4128 aaKnown RBP6.98□□□□□ -1.29
UPF3A-212ENST00000619079 CHKB-CPT1BH3BT56 60 aa6.98□□□□□ -1.29
UPF3A-212ENST00000619079 KRTAP26-1Q6PEX3 210 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms