RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 C15orf56Q8N910 161 aa9.49□□□□□ -0.89
PTPN9-206ENST00000618819 MUC22E2RYF6 1773 aaPredicted RBP9.49□□□□□ -0.89
PTPN9-206ENST00000618819 COL27A1Q8IZC6 1860 aaPredicted RBP9.49□□□□□ -0.89
PTPN9-206ENST00000618819 LINC00483Q53H64 154 aa9.48□□□□□ -0.89
PTPN9-206ENST00000618819 A0A0A0MQY5 61 aa9.47□□□□□ -0.89
PTPN9-206ENST00000618819 F8P00451 2351 aa9.46□□□□□ -0.9
PTPN9-206ENST00000618819 ZNF861PO60384 105 aa9.44□□□□□ -0.9
PTPN9-206ENST00000618819 FAM229BQ4G0N7 80 aa9.44□□□□□ -0.9
PTPN9-206ENST00000618819 A0A1W2PNM2 257 aa9.43□□□□□ -0.9
PTPN9-206ENST00000618819 CAMK2N1Q7Z7J9 78 aa9.43□□□□□ -0.9
PTPN9-206ENST00000618819 PIEZO2Q9H5I5 2752 aa9.43□□□□□ -0.9
PTPN9-206ENST00000618819 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
PTPN9-206ENST00000618819 A0A1B0GU33 70 aa9.41□□□□□ -0.9
PTPN9-206ENST00000618819 SMR3BP02814 79 aaPredicted RBP9.4□□□□□ -0.9
PTPN9-206ENST00000618819 Q75L30 129 aa9.4□□□□□ -0.9
PTPN9-206ENST00000618819 Q5XG85 94 aa9.36□□□□□ -0.91
PTPN9-206ENST00000618819 OCR1Q9BZK8 76 aa9.36□□□□□ -0.91
PTPN9-206ENST00000618819 PLA2G2DQ9UNK4 145 aa9.36□□□□□ -0.91
PTPN9-206ENST00000618819 TLN1Q9Y490 2541 aaKnown RBP9.36□□□□□ -0.91
PTPN9-206ENST00000618819 TLN2Q9Y4G6 2542 aa9.35□□□□□ -0.91
PTPN9-206ENST00000618819 LRRK2Q5S007 2527 aa9.34□□□□□ -0.91
PTPN9-206ENST00000618819 SPRR4Q96PI1 79 aa9.31□□□□□ -0.92
PTPN9-206ENST00000618819 KRTAP24-1Q3LI83 254 aa9.31□□□□□ -0.92
PTPN9-206ENST00000618819 IGLV7-43P04211 117 aa9.3□□□□□ -0.92
PTPN9-206ENST00000618819 PSORS1C2Q9UIG4 136 aa9.3□□□□□ -0.92
PTPN9-206ENST00000618819 TLX1NBP0CAT3 122 aa9.3□□□□□ -0.92
PTPN9-206ENST00000618819 SPINK7P58062 85 aa9.3□□□□□ -0.92
PTPN9-206ENST00000618819 HRES1P13985 223 aa9.3□□□□□ -0.92
PTPN9-206ENST00000618819 PRR34Q9NV39 138 aa9.29□□□□□ -0.92
PTPN9-206ENST00000618819 IGLV7-46A0A075B6I9 117 aa9.29□□□□□ -0.92
PTPN9-206ENST00000618819 JMJD1CQ15652 2540 aa9.28□□□□□ -0.92
PTPN9-206ENST00000618819 FP248Q71RG6 208 aaPredicted RBP9.26□□□□□ -0.93
PTPN9-206ENST00000618819 DMAC1Q96GE9 116 aa9.26□□□□□ -0.93
PTPN9-206ENST00000618819 CASC10Q5T4H9 136 aa9.26□□□□□ -0.93
PTPN9-206ENST00000618819 Q8N9P0 234 aaPredicted RBP9.25□□□□□ -0.93
PTPN9-206ENST00000618819 SRCAPQ6ZRS2 3230 aa9.24□□□□□ -0.93
PTPN9-206ENST00000618819 A0A087WTM6 91 aa9.24□□□□□ -0.93
PTPN9-206ENST00000618819 CYSTM1Q9H1C7 97 aa9.24□□□□□ -0.93
PTPN9-206ENST00000618819 ABCA12Q86UK0 2595 aa9.24□□□□□ -0.93
PTPN9-206ENST00000618819 ACANP16112 2415 aa9.24□□□□□ -0.93
PTPN9-206ENST00000618819 LINC01558Q9Y6Z2 57 aa9.24□□□□□ -0.93
PTPN9-206ENST00000618819 Q5VV11 94 aa9.23□□□□□ -0.93
PTPN9-206ENST00000618819 WWC2-AS2Q96NR7 200 aa9.22□□□□□ -0.93
PTPN9-206ENST00000618819 IGF2RP11717 2491 aa9.2□□□□□ -0.94
PTPN9-206ENST00000618819 KRTAP10-11P60412 298 aa9.19□□□□□ -0.94
PTPN9-206ENST00000618819 CNBPP62633 177 aaKnown RBP9.19□□□□□ -0.94
PTPN9-206ENST00000618819 GIG44P09565 113 aaPredicted RBP9.19□□□□□ -0.94
PTPN9-206ENST00000618819 Q6ZSA8 131 aa9.18□□□□□ -0.94
PTPN9-206ENST00000618819 CR1P17927 2039 aa9.18□□□□□ -0.94
PTPN9-206ENST00000618819 C10orf142B7Z368 130 aa9.18□□□□□ -0.94
PTPN9-206ENST00000618819 ZFYVE26Q68DK2 2539 aa9.16□□□□□ -0.94
PTPN9-206ENST00000618819 PKD1L2Q7Z442 2459 aa9.16□□□□□ -0.94
PTPN9-206ENST00000618819 SETD2Q9BYW2 2564 aaPredicted RBP9.16□□□□□ -0.94
PTPN9-206ENST00000618819 GOLGB1Q14789 3259 aaKnown RBP9.16□□□□□ -0.94
PTPN9-206ENST00000618819 LINC00612Q8N6U2 182 aa9.14□□□□□ -0.95
PTPN9-206ENST00000618819 WDR87Q6ZQQ6 2873 aa9.13□□□□□ -0.95
PTPN9-206ENST00000618819 M0R2T5 61 aa9.12□□□□□ -0.95
PTPN9-206ENST00000618819 S4R3F8 94 aa9.12□□□□□ -0.95
PTPN9-206ENST00000618819 K7EIL1 84 aa9.11□□□□□ -0.95
PTPN9-206ENST00000618819 PCSK5Q92824 1860 aa9.08□□□□□ -0.96
PTPN9-206ENST00000618819 NCOR2Q9Y618 2525 aa9.08□□□□□ -0.96
PTPN9-206ENST00000618819 C19orf73Q9NVV2 129 aa9.08□□□□□ -0.96
PTPN9-206ENST00000618819 KLK9Q2XQG4 91 aa9.07□□□□□ -0.96
PTPN9-206ENST00000618819 ROMO1P60602 79 aa9.07□□□□□ -0.96
PTPN9-206ENST00000618819 COL4A2P08572 1712 aa9.06□□□□□ -0.96
PTPN9-206ENST00000618819 MMP24-AS1A0A0U1RRL7 71 aa9.06□□□□□ -0.96
PTPN9-206ENST00000618819 USP9XQ93008 2570 aaPredicted RBP9.05□□□□□ -0.96
PTPN9-206ENST00000618819 KRTAP16-1A8MUX0 517 aa9.05□□□□□ -0.96
PTPN9-206ENST00000618819 A0A096LNT2 108 aa9.03□□□□□ -0.96
PTPN9-206ENST00000618819 OXTP01178 125 aa9.03□□□□□ -0.96
PTPN9-206ENST00000618819 ZCCHC13Q8WW36 166 aaKnown RBP9.02□□□□□ -0.97
PTPN9-206ENST00000618819 R4GN34 69 aa9.01□□□□□ -0.97
PTPN9-206ENST00000618819 Q5W150 140 aa9□□□□□ -0.97
PTPN9-206ENST00000618819 H1FX-AS1Q4G0G2 97 aa9□□□□□ -0.97
PTPN9-206ENST00000618819 KRTAP10-3P60369 221 aa8.99□□□□□ -0.97
PTPN9-206ENST00000618819 RPL37P61927 97 aaKnown RBP8.97□□□□□ -0.97
PTPN9-206ENST00000618819 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.96□□□□□ -0.98
PTPN9-206ENST00000618819 SPATA8Q6RVD6 105 aa8.91□□□□□ -0.98
PTPN9-206ENST00000618819 TNP2Q05952 138 aa8.88□□□□□ -0.99
PTPN9-206ENST00000618819 M0QZ58 72 aa8.87□□□□□ -0.99
PTPN9-206ENST00000618819 Q8NDZ9 215 aa8.86□□□□□ -0.99
PTPN9-206ENST00000618819 DNAH12Q6ZR08 3092 aa8.84□□□□□ -1
PTPN9-206ENST00000618819 ANKRD17O75179 2603 aaKnown RBP8.83□□□□□ -1
PTPN9-206ENST00000618819 USP9YO00507 2555 aaPredicted RBP8.83□□□□□ -1
PTPN9-206ENST00000618819 LINC00472Q9H8W2 130 aa8.81□□□□□ -1
PTPN9-206ENST00000618819 CHD8Q9HCK8 2581 aa8.81□□□□□ -1
PTPN9-206ENST00000618819 MTORP42345 2549 aa8.8□□□□□ -1
PTPN9-206ENST00000618819 NDUFAF8A1L188 74 aa8.77□□□□□ -1.01
PTPN9-206ENST00000618819 PLAC4Q8WY50 150 aa8.76□□□□□ -1.01
PTPN9-206ENST00000618819 ADM2Q7Z4H4 148 aa8.76□□□□□ -1.01
PTPN9-206ENST00000618819 UTRNP46939 3433 aa8.76□□□□□ -1.01
PTPN9-206ENST00000618819 C20orf166-AS1Q96NR2 134 aa8.75□□□□□ -1.01
PTPN9-206ENST00000618819 KRTAP26-1Q6PEX3 210 aa8.73□□□□□ -1.01
PTPN9-206ENST00000618819 KRTAP25-1Q3LHN0 102 aa8.72□□□□□ -1.01
PTPN9-206ENST00000618819 SPTBN4Q9H254 2564 aa8.71□□□□□ -1.01
PTPN9-206ENST00000618819 ASB16-AS1Q495Z4 193 aa8.71□□□□□ -1.02
PTPN9-206ENST00000618819 POLQO75417 2590 aa8.7□□□□□ -1.02
PTPN9-206ENST00000618819 CENPFP49454 3210 aa8.69□□□□□ -1.02
PTPN9-206ENST00000618819 FLG2Q5D862 2391 aaPredicted RBP8.69□□□□□ -1.02
PTPN9-206ENST00000618819 SPRR1AP35321 89 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms