RNA–Protein interactions for RNA: ENST00000617697.4

SLC39A1-210, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLC39A1, Length 2,214 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-210ENST00000617697 Q6ZRX8 168 aa11.6□□□□□ -0.55
SLC39A1-210ENST00000617697 LOC107984640A0A0U1RRK4 108 aa11.59□□□□□ -0.55
SLC39A1-210ENST00000617697 TENM3Q9P273 2699 aa11.59□□□□□ -0.55
SLC39A1-210ENST00000617697 IGLV1-50A0A075B6I6 118 aa11.59□□□□□ -0.55
SLC39A1-210ENST00000617697 TRAV7A0A075B6U4 112 aa11.59□□□□□ -0.55
SLC39A1-210ENST00000617697 J3KT08 172 aa11.58□□□□□ -0.56
SLC39A1-210ENST00000617697 A0A1B0GW54 56 aa11.56□□□□□ -0.56
SLC39A1-210ENST00000617697 K7EIL1 84 aa11.56□□□□□ -0.56
SLC39A1-210ENST00000617697 SPRR1AP35321 89 aa11.56□□□□□ -0.56
SLC39A1-210ENST00000617697 DEFB105AQ8NG35 78 aa11.56□□□□□ -0.56
SLC39A1-210ENST00000617697 CASC10Q5T4H9 136 aa11.56□□□□□ -0.56
SLC39A1-210ENST00000617697 RPL37AP8A6NKH3 93 aa11.55□□□□□ -0.56
SLC39A1-210ENST00000617697 PRB2P02812 416 aaPredicted RBP11.55□□□□□ -0.56
SLC39A1-210ENST00000617697 Q8N377 158 aa11.55□□□□□ -0.56
SLC39A1-210ENST00000617697 IGLV5-48A0A075B6I7 105 aa11.55□□□□□ -0.56
SLC39A1-210ENST00000617697 MRPL55Q7Z7F7 128 aaKnown RBP11.55□□□□□ -0.56
SLC39A1-210ENST00000617697 NREPQ16612 68 aa11.54□□□□□ -0.56
SLC39A1-210ENST00000617697 PKD1L1Q8TDX9 2849 aa11.54□□□□□ -0.56
SLC39A1-210ENST00000617697 KRTAP4-16G5E9R7 235 aaPredicted RBP11.54□□□□□ -0.56
SLC39A1-210ENST00000617697 CYSTM1Q9H1C7 97 aa11.54□□□□□ -0.56
SLC39A1-210ENST00000617697 STAB1Q9NY15 2570 aa11.53□□□□□ -0.56
SLC39A1-210ENST00000617697 DNAH3Q8TD57 4116 aa11.53□□□□□ -0.56
SLC39A1-210ENST00000617697 FAM168BA1KXE4 195 aa11.53□□□□□ -0.56
SLC39A1-210ENST00000617697 FUSP35637 526 aaKnown RBP eCLIP11.53□□□□□ -0.56
SLC39A1-210ENST00000617697 RPS28P62857 69 aaKnown RBP11.53□□□□□ -0.56
SLC39A1-210ENST00000617697 SCXQ7RTU7 201 aa11.52□□□□□ -0.57
SLC39A1-210ENST00000617697 FAM19A5Q7Z5A7 132 aaPredicted RBP11.52□□□□□ -0.57
SLC39A1-210ENST00000617697 CMYA5Q8N3K9 4069 aa11.51□□□□□ -0.57
SLC39A1-210ENST00000617697 MAST4O15021 2626 aa11.51□□□□□ -0.57
SLC39A1-210ENST00000617697 C20orf197Q8N268 126 aa11.51□□□□□ -0.57
SLC39A1-210ENST00000617697 Q9BRP9 147 aa11.5□□□□□ -0.57
SLC39A1-210ENST00000617697 FBN1P35555 2871 aaKnown RBP11.49□□□□□ -0.57
SLC39A1-210ENST00000617697 BPY2O14599 106 aa11.47□□□□□ -0.57
SLC39A1-210ENST00000617697 UBE2BP63146 152 aa11.47□□□□□ -0.57
SLC39A1-210ENST00000617697 REG3GQ6UW15 175 aa11.47□□□□□ -0.57
SLC39A1-210ENST00000617697 C3orf84H3BNL1 204 aa11.46□□□□□ -0.57
SLC39A1-210ENST00000617697 BAHCC1Q9P281 2608 aa11.46□□□□□ -0.58
SLC39A1-210ENST00000617697 KRTAP7-1Q8IUC3 87 aa11.45□□□□□ -0.58
SLC39A1-210ENST00000617697 ANK2Q01484 3957 aa11.45□□□□□ -0.58
SLC39A1-210ENST00000617697 C1orf137Q5JT78 98 aa11.45□□□□□ -0.58
SLC39A1-210ENST00000617697 FLNBO75369 2602 aaKnown RBP11.45□□□□□ -0.58
SLC39A1-210ENST00000617697 PSCAO43653 123 aa11.44□□□□□ -0.58
SLC39A1-210ENST00000617697 DPH3Q96FX2 82 aa11.44□□□□□ -0.58
SLC39A1-210ENST00000617697 TNP2Q05952 138 aa11.44□□□□□ -0.58
SLC39A1-210ENST00000617697 KLKP1Q107X0 134 aa11.44□□□□□ -0.58
SLC39A1-210ENST00000617697 UBE2DNLQ8IWF7 75 aa11.44□□□□□ -0.58
SLC39A1-210ENST00000617697 SVIPQ8NHG7 77 aa11.44□□□□□ -0.58
SLC39A1-210ENST00000617697 CNBPP62633 177 aaKnown RBP11.43□□□□□ -0.58
SLC39A1-210ENST00000617697 C14orf177Q52M58 125 aa11.43□□□□□ -0.58
SLC39A1-210ENST00000617697 C16orf90A8MZG2 172 aa11.42□□□□□ -0.58
SLC39A1-210ENST00000617697 IGKV4-1P06312 121 aa11.42□□□□□ -0.58
SLC39A1-210ENST00000617697 Q8NBF4 154 aa11.42□□□□□ -0.58
SLC39A1-210ENST00000617697 ST20-AS1Q8NBB2 130 aa11.41□□□□□ -0.58
SLC39A1-210ENST00000617697 F8WEM9 126 aa11.41□□□□□ -0.58
SLC39A1-210ENST00000617697 NDUFC1O43677 76 aa11.39□□□□□ -0.59
SLC39A1-210ENST00000617697 FAM236DA0A1B0GTK5 79 aa11.39□□□□□ -0.59
SLC39A1-210ENST00000617697 A0A1W2PNM2 257 aa11.39□□□□□ -0.59
SLC39A1-210ENST00000617697 FAM236CP0DP71 79 aa11.39□□□□□ -0.59
SLC39A1-210ENST00000617697 PKIGQ9Y2B9 76 aa11.39□□□□□ -0.59
SLC39A1-210ENST00000617697 NOTCH1P46531 2555 aa11.38□□□□□ -0.59
SLC39A1-210ENST00000617697 ERC2-IT1O76042 136 aa11.38□□□□□ -0.59
SLC39A1-210ENST00000617697 SPRR4Q96PI1 79 aa11.37□□□□□ -0.59
SLC39A1-210ENST00000617697 A0A096LNI7 61 aa11.37□□□□□ -0.59
SLC39A1-210ENST00000617697 Q8N9L7 120 aa11.36□□□□□ -0.59
SLC39A1-210ENST00000617697 IGKV2-24A0A0C4DH68 120 aa11.35□□□□□ -0.59
SLC39A1-210ENST00000617697 H7BZZ5 65 aa11.35□□□□□ -0.59
SLC39A1-210ENST00000617697 KRTAP1-5Q9BYS1 174 aa11.35□□□□□ -0.59
SLC39A1-210ENST00000617697 APLNQ9ULZ1 77 aa11.34□□□□□ -0.59
SLC39A1-210ENST00000617697 SNURFQ9Y675 71 aa11.32□□□□□ -0.6
SLC39A1-210ENST00000617697 DNAH1Q9P2D7 4330 aa11.31□□□□□ -0.6
SLC39A1-210ENST00000617697 SMIM29Q86T20 159 aa11.3□□□□□ -0.6
SLC39A1-210ENST00000617697 TMEM254Q8TBM7 123 aa11.3□□□□□ -0.6
SLC39A1-210ENST00000617697 LINC00476Q8WZB0 136 aa11.3□□□□□ -0.6
SLC39A1-210ENST00000617697 ATP5EP56381 51 aaPredicted RBP11.29□□□□□ -0.6
SLC39A1-210ENST00000617697 A0A1W2PNN7 141 aa11.29□□□□□ -0.6
SLC39A1-210ENST00000617697 OCR1Q9BZK8 76 aa11.29□□□□□ -0.6
SLC39A1-210ENST00000617697 HUWE1Q7Z6Z7 4374 aaKnown RBP11.28□□□□□ -0.6
SLC39A1-210ENST00000617697 COL6A5A8TX70 2615 aa11.28□□□□□ -0.6
SLC39A1-210ENST00000617697 NBEAL1Q6ZS30 2694 aa11.28□□□□□ -0.6
SLC39A1-210ENST00000617697 PRLHP81277 87 aa11.28□□□□□ -0.6
SLC39A1-210ENST00000617697 B9D2Q9BPU9 175 aa11.28□□□□□ -0.6
SLC39A1-210ENST00000617697 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.27□□□□□ -0.61
SLC39A1-210ENST00000617697 SERP1Q9Y6X1 66 aa11.27□□□□□ -0.61
SLC39A1-210ENST00000617697 HIGD2AQ9BW72 106 aa11.27□□□□□ -0.61
SLC39A1-210ENST00000617697 IGLV8-61A0A075B6I0 122 aa11.26□□□□□ -0.61
SLC39A1-210ENST00000617697 H0Y9J4 135 aa11.25□□□□□ -0.61
SLC39A1-210ENST00000617697 LINC00474Q9P2X8 69 aa11.25□□□□□ -0.61
SLC39A1-210ENST00000617697 NUPR2A6NF83 97 aa11.24□□□□□ -0.61
SLC39A1-210ENST00000617697 IGFL1Q6UW32 110 aa11.24□□□□□ -0.61
SLC39A1-210ENST00000617697 UBE2AP49459 152 aa11.23□□□□□ -0.61
SLC39A1-210ENST00000617697 C9orf163Q8N9P6 203 aa11.22□□□□□ -0.61
SLC39A1-210ENST00000617697 OXTP01178 125 aa11.21□□□□□ -0.61
SLC39A1-210ENST00000617697 NBDYA0A0U1RRE5 68 aa11.21□□□□□ -0.62
SLC39A1-210ENST00000617697 DSCR10P59022 87 aa11.21□□□□□ -0.62
SLC39A1-210ENST00000617697 A0A0U1RQV1 116 aa11.2□□□□□ -0.62
SLC39A1-210ENST00000617697 PHF5AQ7RTV0 110 aaKnown RBP11.2□□□□□ -0.62
SLC39A1-210ENST00000617697 CHTF8P0CG12 524 aa11.19□□□□□ -0.62
SLC39A1-210ENST00000617697 EPM2AB3EWF7 344 aa11.18□□□□□ -0.62
SLC39A1-210ENST00000617697 SPRR1BP22528 89 aa11.18□□□□□ -0.62
SLC39A1-210ENST00000617697 K7EQZ3 153 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms