RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 A0A0C4DFX4 3053 aa12.29□□□□□ -0.44
AC008878.3-201ENST00000617428 CHD9Q3L8U1 2897 aa12.28□□□□□ -0.44
AC008878.3-201ENST00000617428 LOC110117498A0A087WWA1 95 aa12.28□□□□□ -0.44
AC008878.3-201ENST00000617428 J3QL48 77 aa12.27□□□□□ -0.44
AC008878.3-201ENST00000617428 BRCA2P51587 3418 aa12.27□□□□□ -0.45
AC008878.3-201ENST00000617428 IGLV1-50A0A075B6I6 118 aa12.27□□□□□ -0.45
AC008878.3-201ENST00000617428 TM2D3Q9BRN9 247 aa12.26□□□□□ -0.45
AC008878.3-201ENST00000617428 C15orf56Q8N910 161 aa12.26□□□□□ -0.45
AC008878.3-201ENST00000617428 CHD6Q8TD26 2715 aa12.25□□□□□ -0.45
AC008878.3-201ENST00000617428 COL6A5A8TX70 2615 aa12.25□□□□□ -0.45
AC008878.3-201ENST00000617428 LINC00612Q8N6U2 182 aa12.24□□□□□ -0.45
AC008878.3-201ENST00000617428 EIF4EBP3O60516 100 aaPredicted RBP12.24□□□□□ -0.45
AC008878.3-201ENST00000617428 MGAQ8IWI9 3026 aa12.24□□□□□ -0.45
AC008878.3-201ENST00000617428 A0A087WTM6 91 aa12.23□□□□□ -0.45
AC008878.3-201ENST00000617428 PMAIP1Q13794 54 aa12.23□□□□□ -0.45
AC008878.3-201ENST00000617428 KCNQ1DNQ9H478 68 aa12.23□□□□□ -0.45
AC008878.3-201ENST00000617428 ZNF292O60281 2723 aa12.23□□□□□ -0.45
AC008878.3-201ENST00000617428 Q96NJ1 140 aa12.23□□□□□ -0.45
AC008878.3-201ENST00000617428 TRBV7-4A0A0J9YYF1 115 aa12.21□□□□□ -0.45
AC008878.3-201ENST00000617428 SMR3BP02814 79 aaPredicted RBP12.21□□□□□ -0.46
AC008878.3-201ENST00000617428 TRAV22A0A0B4J277 110 aa12.2□□□□□ -0.46
AC008878.3-201ENST00000617428 LINC00528Q8N1L1 170 aa12.19□□□□□ -0.46
AC008878.3-201ENST00000617428 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
AC008878.3-201ENST00000617428 ACYP2P14621 99 aa12.18□□□□□ -0.46
AC008878.3-201ENST00000617428 ATP11AUNQ6ZP68 121 aa12.17□□□□□ -0.46
AC008878.3-201ENST00000617428 CFAP54Q96N23 3096 aa12.16□□□□□ -0.46
AC008878.3-201ENST00000617428 C9orf129Q5T035 196 aaKnown RBP12.16□□□□□ -0.46
AC008878.3-201ENST00000617428 ZNF861PO60384 105 aa12.15□□□□□ -0.46
AC008878.3-201ENST00000617428 C1orf195Q5TG92 126 aa12.15□□□□□ -0.46
AC008878.3-201ENST00000617428 A0A1B0GU69 56 aa12.13□□□□□ -0.47
AC008878.3-201ENST00000617428 CASC10Q5T4H9 136 aa12.13□□□□□ -0.47
AC008878.3-201ENST00000617428 LAMA2P24043 3122 aaKnown RBP12.12□□□□□ -0.47
AC008878.3-201ENST00000617428 APLNQ9ULZ1 77 aa12.12□□□□□ -0.47
AC008878.3-201ENST00000617428 MAP1AP78559 2803 aaPredicted RBP12.11□□□□□ -0.47
AC008878.3-201ENST00000617428 NOTCH1P46531 2555 aa12.11□□□□□ -0.47
AC008878.3-201ENST00000617428 A8MWP4 228 aa12.11□□□□□ -0.47
AC008878.3-201ENST00000617428 K7EQZ3 153 aa12.1□□□□□ -0.47
AC008878.3-201ENST00000617428 WDFY4Q6ZS81 3184 aa12.1□□□□□ -0.47
AC008878.3-201ENST00000617428 PRUNE2Q8WUY3 3088 aa12.1□□□□□ -0.47
AC008878.3-201ENST00000617428 IGFL1Q6UW32 110 aa12.1□□□□□ -0.47
AC008878.3-201ENST00000617428 NBEAL1Q6ZS30 2694 aa12.09□□□□□ -0.47
AC008878.3-201ENST00000617428 H3BPC8 53 aa12.09□□□□□ -0.47
AC008878.3-201ENST00000617428 ANAPC11Q9NYG5 84 aa12.09□□□□□ -0.47
AC008878.3-201ENST00000617428 SPAG11AQ6PDA7 123 aa12.08□□□□□ -0.48
AC008878.3-201ENST00000617428 LINC00304Q8N9R0 145 aa12.08□□□□□ -0.48
AC008878.3-201ENST00000617428 C8orf87E5RJ46 101 aa12.08□□□□□ -0.48
AC008878.3-201ENST00000617428 SSBP3-AS1Q7Z2R9 100 aa12.08□□□□□ -0.48
AC008878.3-201ENST00000617428 MRPL34Q9BQ48 92 aaKnown RBP12.07□□□□□ -0.48
AC008878.3-201ENST00000617428 A0A0G2JQZ4 141 aa12.07□□□□□ -0.48
AC008878.3-201ENST00000617428 A0A1W2PNN7 141 aa12.07□□□□□ -0.48
AC008878.3-201ENST00000617428 TRANK1O15050 2925 aa12.06□□□□□ -0.48
AC008878.3-201ENST00000617428 Q8N377 158 aa12.06□□□□□ -0.48
AC008878.3-201ENST00000617428 TLX1NBP0CAT3 122 aa12.05□□□□□ -0.48
AC008878.3-201ENST00000617428 DSPP15924 2871 aaKnown RBP12.05□□□□□ -0.48
AC008878.3-201ENST00000617428 UNC79Q9P2D8 2635 aa12.04□□□□□ -0.48
AC008878.3-201ENST00000617428 PSORS1C2Q9UIG4 136 aa12.03□□□□□ -0.48
AC008878.3-201ENST00000617428 ZNF575Q86XF7 245 aa12.02□□□□□ -0.48
AC008878.3-201ENST00000617428 LOC101927531A0A1B0GV80 90 aa12.02□□□□□ -0.49
AC008878.3-201ENST00000617428 DSCR10P59022 87 aa12.01□□□□□ -0.49
AC008878.3-201ENST00000617428 LINC00336Q6ZUF6 198 aa12.01□□□□□ -0.49
AC008878.3-201ENST00000617428 IGLV8-61A0A075B6I0 122 aa12□□□□□ -0.49
AC008878.3-201ENST00000617428 IGLV7-43P04211 117 aa12□□□□□ -0.49
AC008878.3-201ENST00000617428 COX6B2Q6YFQ2 88 aa11.99□□□□□ -0.49
AC008878.3-201ENST00000617428 OBSCN-AS1Q96MR7 158 aa11.99□□□□□ -0.49
AC008878.3-201ENST00000617428 PLA2G2DQ9UNK4 145 aa11.98□□□□□ -0.49
AC008878.3-201ENST00000617428 TRIOO75962 3097 aa11.98□□□□□ -0.49
AC008878.3-201ENST00000617428 C9orf92A6NGG3 77 aa11.98□□□□□ -0.49
AC008878.3-201ENST00000617428 CNBPP62633 177 aaKnown RBP11.98□□□□□ -0.49
AC008878.3-201ENST00000617428 UNC80Q8N2C7 3258 aa11.96□□□□□ -0.5
AC008878.3-201ENST00000617428 PRR15Q8IV56 129 aa11.96□□□□□ -0.5
AC008878.3-201ENST00000617428 C8orf17Q9NRJ1 99 aa11.96□□□□□ -0.5
AC008878.3-201ENST00000617428 ERC2-IT1O76042 136 aa11.96□□□□□ -0.5
AC008878.3-201ENST00000617428 BAHCC1Q9P281 2608 aa11.94□□□□□ -0.5
AC008878.3-201ENST00000617428 UBR5O95071 2799 aaPredicted RBP11.92□□□□□ -0.5
AC008878.3-201ENST00000617428 TNP2Q05952 138 aa11.92□□□□□ -0.5
AC008878.3-201ENST00000617428 A0A1B0GVX0 72 aa11.91□□□□□ -0.5
AC008878.3-201ENST00000617428 SPRR4Q96PI1 79 aa11.9□□□□□ -0.5
AC008878.3-201ENST00000617428 GCN1Q92616 2671 aaKnown RBP11.87□□□□□ -0.51
AC008878.3-201ENST00000617428 IGSF10Q6WRI0 2623 aa11.86□□□□□ -0.51
AC008878.3-201ENST00000617428 A0A1W2PNM2 257 aa11.82□□□□□ -0.52
AC008878.3-201ENST00000617428 LINC01600Q96MT4 127 aa11.8□□□□□ -0.52
AC008878.3-201ENST00000617428 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
AC008878.3-201ENST00000617428 WIPF1O43516 503 aa11.8□□□□□ -0.52
AC008878.3-201ENST00000617428 CR1P17927 2039 aa11.79□□□□□ -0.52
AC008878.3-201ENST00000617428 COA5Q86WW8 74 aa11.79□□□□□ -0.52
AC008878.3-201ENST00000617428 RPS28P62857 69 aaKnown RBP11.78□□□□□ -0.52
AC008878.3-201ENST00000617428 C4orf26Q17RF5 130 aa11.77□□□□□ -0.53
AC008878.3-201ENST00000617428 NSD1Q96L73 2696 aaPredicted RBP11.76□□□□□ -0.53
AC008878.3-201ENST00000617428 FLG2Q5D862 2391 aaPredicted RBP11.76□□□□□ -0.53
AC008878.3-201ENST00000617428 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.75□□□□□ -0.53
AC008878.3-201ENST00000617428 IGLV5-37A0A075B6J1 123 aa11.74□□□□□ -0.53
AC008878.3-201ENST00000617428 CDH23Q9H251 3354 aa11.73□□□□□ -0.53
AC008878.3-201ENST00000617428 PRO0628Q9UI54 55 aa11.72□□□□□ -0.53
AC008878.3-201ENST00000617428 NBEAL2Q6ZNJ1 2754 aa11.69□□□□□ -0.54
AC008878.3-201ENST00000617428 A8MUN3 132 aa11.69□□□□□ -0.54
AC008878.3-201ENST00000617428 IGLV5-48A0A075B6I7 105 aa11.68□□□□□ -0.54
AC008878.3-201ENST00000617428 FRYQ5TBA9 3013 aa11.68□□□□□ -0.54
AC008878.3-201ENST00000617428 VPS13AQ96RL7 3174 aa11.68□□□□□ -0.54
AC008878.3-201ENST00000617428 KLKP1Q107X0 134 aa11.65□□□□□ -0.54
AC008878.3-201ENST00000617428 RBM12B-AS1Q9P1G2 102 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms