RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 AKAP13Q12802 2813 aa9.14□□□□□ -0.95
PPP4R3B-205ENST00000616288 SPENQ96T58 3664 aaKnown RBP9.13□□□□□ -0.95
PPP4R3B-205ENST00000616288 IGKV2-24A0A0C4DH68 120 aa9.13□□□□□ -0.95
PPP4R3B-205ENST00000616288 LOC101927531A0A1B0GV80 90 aa9.13□□□□□ -0.95
PPP4R3B-205ENST00000616288 C6orf48Q9UBA6 75 aa9.13□□□□□ -0.95
PPP4R3B-205ENST00000616288 EGFEM1PQ0D2K5 195 aa9.12□□□□□ -0.95
PPP4R3B-205ENST00000616288 C16orf90A8MZG2 172 aa9.12□□□□□ -0.95
PPP4R3B-205ENST00000616288 COA5Q86WW8 74 aa9.12□□□□□ -0.95
PPP4R3B-205ENST00000616288 RPL37AP61513 92 aaKnown RBP9.12□□□□□ -0.95
PPP4R3B-205ENST00000616288 Q6YL49 198 aa9.11□□□□□ -0.95
PPP4R3B-205ENST00000616288 Q8NBF4 154 aa9.11□□□□□ -0.95
PPP4R3B-205ENST00000616288 ITPR1Q14643 2758 aa9.1□□□□□ -0.95
PPP4R3B-205ENST00000616288 LINC00588Q9Y4M8 146 aa9.09□□□□□ -0.95
PPP4R3B-205ENST00000616288 LELP1Q5T871 98 aa9.09□□□□□ -0.95
PPP4R3B-205ENST00000616288 A8MU10 97 aa9.08□□□□□ -0.96
PPP4R3B-205ENST00000616288 Q5VV11 94 aa9.08□□□□□ -0.96
PPP4R3B-205ENST00000616288 ASH1LQ9NR48 2969 aaKnown RBP9.08□□□□□ -0.96
PPP4R3B-205ENST00000616288 ACANP16112 2415 aa9.07□□□□□ -0.96
PPP4R3B-205ENST00000616288 DMDP11532 3685 aa9.07□□□□□ -0.96
PPP4R3B-205ENST00000616288 PRAC1Q96KF2 57 aa9.05□□□□□ -0.96
PPP4R3B-205ENST00000616288 A0A0G2JQZ4 141 aa9.04□□□□□ -0.96
PPP4R3B-205ENST00000616288 A0A1W2PNN7 141 aa9.04□□□□□ -0.96
PPP4R3B-205ENST00000616288 CENPEQ02224 2701 aa9.04□□□□□ -0.96
PPP4R3B-205ENST00000616288 C8orf87E5RJ46 101 aa9.04□□□□□ -0.96
PPP4R3B-205ENST00000616288 CDC42SE1Q9NRR8 79 aa9.04□□□□□ -0.96
PPP4R3B-205ENST00000616288 VPREB1P12018 145 aa9.04□□□□□ -0.96
PPP4R3B-205ENST00000616288 LINC00528Q8N1L1 170 aa9.03□□□□□ -0.96
PPP4R3B-205ENST00000616288 Q8N9P0 234 aaPredicted RBP9.03□□□□□ -0.96
PPP4R3B-205ENST00000616288 Q8NDZ9 215 aa9.03□□□□□ -0.96
PPP4R3B-205ENST00000616288 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
PPP4R3B-205ENST00000616288 RETNLBQ9BQ08 111 aa9.02□□□□□ -0.97
PPP4R3B-205ENST00000616288 CHD6Q8TD26 2715 aa9.01□□□□□ -0.97
PPP4R3B-205ENST00000616288 Q8N377 158 aa9□□□□□ -0.97
PPP4R3B-205ENST00000616288 COL12A1Q99715 3063 aa9□□□□□ -0.97
PPP4R3B-205ENST00000616288 LINC00476Q8WZB0 136 aa8.99□□□□□ -0.97
PPP4R3B-205ENST00000616288 A0A1W2PNM2 257 aa8.99□□□□□ -0.97
PPP4R3B-205ENST00000616288 SPINK6Q6UWN8 80 aa8.97□□□□□ -0.97
PPP4R3B-205ENST00000616288 NBEAL2Q6ZNJ1 2754 aa8.97□□□□□ -0.97
PPP4R3B-205ENST00000616288 PRLHP81277 87 aa8.97□□□□□ -0.97
PPP4R3B-205ENST00000616288 A0A1B0GW54 56 aa8.97□□□□□ -0.97
PPP4R3B-205ENST00000616288 H3BPC8 53 aa8.96□□□□□ -0.97
PPP4R3B-205ENST00000616288 IGHV6-1A0A0B4J1U7 121 aa8.96□□□□□ -0.97
PPP4R3B-205ENST00000616288 IGLV1-51P01701 117 aa8.96□□□□□ -0.97
PPP4R3B-205ENST00000616288 Q9BRP9 147 aa8.96□□□□□ -0.97
PPP4R3B-205ENST00000616288 GCN1Q92616 2671 aaKnown RBP8.96□□□□□ -0.98
PPP4R3B-205ENST00000616288 LINC00612Q8N6U2 182 aa8.95□□□□□ -0.98
PPP4R3B-205ENST00000616288 Q6ZRX8 168 aa8.94□□□□□ -0.98
PPP4R3B-205ENST00000616288 A0A1B0GU69 56 aa8.94□□□□□ -0.98
PPP4R3B-205ENST00000616288 REG3GQ6UW15 175 aa8.93□□□□□ -0.98
PPP4R3B-205ENST00000616288 LINC01554Q52M75 96 aa8.93□□□□□ -0.98
PPP4R3B-205ENST00000616288 SVEP1Q4LDE5 3571 aa8.92□□□□□ -0.98
PPP4R3B-205ENST00000616288 IGLV9-49A0A0B4J1Y8 123 aa8.92□□□□□ -0.98
PPP4R3B-205ENST00000616288 DSCR10P59022 87 aa8.92□□□□□ -0.98
PPP4R3B-205ENST00000616288 Q75L30 129 aa8.92□□□□□ -0.98
PPP4R3B-205ENST00000616288 PRO3102Q9H379 93 aa8.91□□□□□ -0.98
PPP4R3B-205ENST00000616288 ZNF706Q9Y5V0 76 aaPredicted RBP8.91□□□□□ -0.98
PPP4R3B-205ENST00000616288 LINC00313P59037 77 aa8.91□□□□□ -0.98
PPP4R3B-205ENST00000616288 LAMA5O15230 3695 aa8.9□□□□□ -0.98
PPP4R3B-205ENST00000616288 MOBPQ13875 183 aa8.9□□□□□ -0.99
PPP4R3B-205ENST00000616288 IGLV8-61A0A075B6I0 122 aa8.89□□□□□ -0.99
PPP4R3B-205ENST00000616288 DCHS2Q6V1P9 2916 aa8.89□□□□□ -0.99
PPP4R3B-205ENST00000616288 SPANXA2-OT1Q8N9U9 137 aa8.89□□□□□ -0.99
PPP4R3B-205ENST00000616288 UBE2DNLQ8IWF7 75 aa8.88□□□□□ -0.99
PPP4R3B-205ENST00000616288 GVQW2A0A096LPI5 108 aaPredicted RBP8.87□□□□□ -0.99
PPP4R3B-205ENST00000616288 UNC79Q9P2D8 2635 aa8.86□□□□□ -0.99
PPP4R3B-205ENST00000616288 GIG44P09565 113 aaPredicted RBP8.85□□□□□ -0.99
PPP4R3B-205ENST00000616288 SPINK7P58062 85 aa8.85□□□□□ -0.99
PPP4R3B-205ENST00000616288 KCNQ1DNQ9H478 68 aa8.85□□□□□ -0.99
PPP4R3B-205ENST00000616288 RELNP78509 3460 aa8.85□□□□□ -0.99
PPP4R3B-205ENST00000616288 PHF5AQ7RTV0 110 aaKnown RBP8.85□□□□□ -0.99
PPP4R3B-205ENST00000616288 FAM168BA1KXE4 195 aa8.84□□□□□ -0.99
PPP4R3B-205ENST00000616288 IGLV5-48A0A075B6I7 105 aa8.84□□□□□ -0.99
PPP4R3B-205ENST00000616288 CUBNO60494 3623 aa8.84□□□□□ -0.99
PPP4R3B-205ENST00000616288 IGFL1Q6UW32 110 aa8.84□□□□□ -1
PPP4R3B-205ENST00000616288 PRR26Q8N8Z3 221 aa8.84□□□□□ -1
PPP4R3B-205ENST00000616288 SPINK1P00995 79 aa8.83□□□□□ -1
PPP4R3B-205ENST00000616288 DEFB113Q30KQ7 82 aa8.82□□□□□ -1
PPP4R3B-205ENST00000616288 DEFB131BA0A096LNP1 70 aa8.81□□□□□ -1
PPP4R3B-205ENST00000616288 USP24Q9UPU5 2620 aa8.81□□□□□ -1
PPP4R3B-205ENST00000616288 TP53AIP1Q9HCN2 124 aa8.8□□□□□ -1
PPP4R3B-205ENST00000616288 X6R8D5 127 aa8.8□□□□□ -1
PPP4R3B-205ENST00000616288 A8MWP4 228 aa8.8□□□□□ -1
PPP4R3B-205ENST00000616288 ACYP2P14621 99 aa8.8□□□□□ -1
PPP4R3B-205ENST00000616288 CSNK1G2-AS1Q8NCQ2 148 aa8.78□□□□□ -1
PPP4R3B-205ENST00000616288 A6NN06 94 aa8.78□□□□□ -1
PPP4R3B-205ENST00000616288 CELSR1Q9NYQ6 3014 aa8.77□□□□□ -1.01
PPP4R3B-205ENST00000616288 ZCCHC13Q8WW36 166 aaKnown RBP8.76□□□□□ -1.01
PPP4R3B-205ENST00000616288 MIR22HGQ0VDD5 57 aa8.76□□□□□ -1.01
PPP4R3B-205ENST00000616288 LINC01558Q9Y6Z2 57 aa8.75□□□□□ -1.01
PPP4R3B-205ENST00000616288 K7ERS5 55 aa8.74□□□□□ -1.01
PPP4R3B-205ENST00000616288 UQCR11O14957 56 aa8.74□□□□□ -1.01
PPP4R3B-205ENST00000616288 IGLV7-46A0A075B6I9 117 aa8.73□□□□□ -1.01
PPP4R3B-205ENST00000616288 IGLV1-50A0A075B6I6 118 aa8.72□□□□□ -1.01
PPP4R3B-205ENST00000616288 Q8NAQ8 132 aa8.72□□□□□ -1.01
PPP4R3B-205ENST00000616288 PRR34Q9NV39 138 aa8.72□□□□□ -1.01
PPP4R3B-205ENST00000616288 APCP25054 2843 aa8.72□□□□□ -1.01
PPP4R3B-205ENST00000616288 HRNRQ86YZ3 2850 aaPredicted RBP8.72□□□□□ -1.01
PPP4R3B-205ENST00000616288 SPRR4Q96PI1 79 aa8.72□□□□□ -1.01
PPP4R3B-205ENST00000616288 CSAG1Q6PB30 78 aa8.7□□□□□ -1.02
PPP4R3B-205ENST00000616288 ADM2Q7Z4H4 148 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms