RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 DEFB113Q30KQ7 82 aa4.46□□□□□ -1.69
LMO3-235ENST00000616247 H3BQ85 93 aa4.46□□□□□ -1.7
LMO3-235ENST00000616247 FSHBP01225 129 aa4.46□□□□□ -1.7
LMO3-235ENST00000616247 HELZ2Q9BYK8 2649 aaKnown RBP4.46□□□□□ -1.7
LMO3-235ENST00000616247 ELOF1P60002 83 aaKnown RBP4.46□□□□□ -1.7
LMO3-235ENST00000616247 IGKV2D-24A0A075B6R9 120 aa4.45□□□□□ -1.7
LMO3-235ENST00000616247 M0R378 163 aa4.45□□□□□ -1.7
LMO3-235ENST00000616247 Q6ZRU5 148 aa4.45□□□□□ -1.7
LMO3-235ENST00000616247 X6R8D5 127 aa4.45□□□□□ -1.7
LMO3-235ENST00000616247 WFDC13Q8IUB5 93 aa4.45□□□□□ -1.7
LMO3-235ENST00000616247 ATRQ13535 2644 aa4.45□□□□□ -1.7
LMO3-235ENST00000616247 A0A0J9YWU9 116 aa4.44□□□□□ -1.7
LMO3-235ENST00000616247 IGHV4-30-4P0DP06 118 aa4.44□□□□□ -1.7
LMO3-235ENST00000616247 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
LMO3-235ENST00000616247 ZNF469Q96JG9 3925 aaPredicted RBP4.44□□□□□ -1.7
LMO3-235ENST00000616247 TEP1Q99973 2627 aaKnown RBP4.44□□□□□ -1.7
LMO3-235ENST00000616247 BAHCC1Q9P281 2608 aa4.44□□□□□ -1.7
LMO3-235ENST00000616247 C1orf64Q8NEQ6 169 aa4.44□□□□□ -1.7
LMO3-235ENST00000616247 SPTSSBQ8NFR3 76 aa4.44□□□□□ -1.7
LMO3-235ENST00000616247 A0A0G2JQZ4 141 aa4.43□□□□□ -1.7
LMO3-235ENST00000616247 A0A1W2PNN7 141 aa4.43□□□□□ -1.7
LMO3-235ENST00000616247 KPRPQ5T749 579 aaPredicted RBP4.43□□□□□ -1.7
LMO3-235ENST00000616247 FASNP49327 2511 aaKnown RBP4.43□□□□□ -1.7
LMO3-235ENST00000616247 LYRM9A8MSI8 78 aa4.43□□□□□ -1.7
LMO3-235ENST00000616247 VPREB1P12018 145 aa4.43□□□□□ -1.7
LMO3-235ENST00000616247 UBE2BP63146 152 aa4.43□□□□□ -1.7
LMO3-235ENST00000616247 LELP1Q5T871 98 aa4.43□□□□□ -1.7
LMO3-235ENST00000616247 WFDC10BQ8IUB3 73 aa4.43□□□□□ -1.7
LMO3-235ENST00000616247 ETDCA0A1B0GVM5 59 aa4.42□□□□□ -1.7
LMO3-235ENST00000616247 SPART-AS1P0CW21 52 aa4.42□□□□□ -1.7
LMO3-235ENST00000616247 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
LMO3-235ENST00000616247 Q6ZTC4 211 aa4.42□□□□□ -1.7
LMO3-235ENST00000616247 C1orf137Q5JT78 98 aa4.42□□□□□ -1.7
LMO3-235ENST00000616247 LINC00612Q8N6U2 182 aa4.42□□□□□ -1.7
LMO3-235ENST00000616247 A8MUN3 132 aa4.41□□□□□ -1.7
LMO3-235ENST00000616247 ST20-AS1Q8NBB2 130 aa4.41□□□□□ -1.7
LMO3-235ENST00000616247 ERC2-IT1O76042 136 aa4.41□□□□□ -1.7
LMO3-235ENST00000616247 HIVEP1P15822 2718 aa4.41□□□□□ -1.7
LMO3-235ENST00000616247 HECTD1Q9ULT8 2610 aa4.41□□□□□ -1.7
LMO3-235ENST00000616247 LINC00208Q96KT6 92 aa4.4□□□□□ -1.7
LMO3-235ENST00000616247 hDV103S1A0JD37 113 aa4.4□□□□□ -1.71
LMO3-235ENST00000616247 K7EQZ3 153 aa4.4□□□□□ -1.71
LMO3-235ENST00000616247 EGFEM1PQ0D2K5 195 aa4.4□□□□□ -1.71
LMO3-235ENST00000616247 Q8N377 158 aa4.4□□□□□ -1.71
LMO3-235ENST00000616247 VWFP04275 2813 aa4.4□□□□□ -1.71
LMO3-235ENST00000616247 CHKB-CPT1BH3BT56 60 aa4.4□□□□□ -1.71
LMO3-235ENST00000616247 APOC4P55056 127 aa4.4□□□□□ -1.71
LMO3-235ENST00000616247 Q6ZRP5 223 aa4.4□□□□□ -1.71
LMO3-235ENST00000616247 SYCNQ0VAF6 134 aa4.39□□□□□ -1.71
LMO3-235ENST00000616247 TRAV22A0A0B4J277 110 aa4.39□□□□□ -1.71
LMO3-235ENST00000616247 MP68P56378 58 aa4.39□□□□□ -1.71
LMO3-235ENST00000616247 C7orf33Q8WU49 177 aa4.39□□□□□ -1.71
LMO3-235ENST00000616247 ITPR2Q14571 2701 aa4.39□□□□□ -1.71
LMO3-235ENST00000616247 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.38□□□□□ -1.71
LMO3-235ENST00000616247 A0A1W2PNM2 257 aa4.38□□□□□ -1.71
LMO3-235ENST00000616247 SERTAD4-AS1Q5TG53 156 aa4.38□□□□□ -1.71
LMO3-235ENST00000616247 A0A096LNI7 61 aa4.38□□□□□ -1.71
LMO3-235ENST00000616247 RETNQ9HD89 108 aa4.38□□□□□ -1.71
LMO3-235ENST00000616247 A8MU10 97 aa4.37□□□□□ -1.71
LMO3-235ENST00000616247 AKAP9Q99996 3911 aa4.37□□□□□ -1.71
LMO3-235ENST00000616247 GVQW2A0A096LPI5 108 aaPredicted RBP4.37□□□□□ -1.71
LMO3-235ENST00000616247 FAM168BA1KXE4 195 aa4.37□□□□□ -1.71
LMO3-235ENST00000616247 SMR3AQ99954 134 aa4.37□□□□□ -1.71
LMO3-235ENST00000616247 PRR34Q9NV39 138 aa4.37□□□□□ -1.71
LMO3-235ENST00000616247 RPL37AP61513 92 aaKnown RBP4.36□□□□□ -1.71
LMO3-235ENST00000616247 PDZD2O15018 2839 aa4.36□□□□□ -1.71
LMO3-235ENST00000616247 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
LMO3-235ENST00000616247 HCG22E2RYF7 251 aa4.36□□□□□ -1.71
LMO3-235ENST00000616247 PSCAO43653 123 aa4.36□□□□□ -1.71
LMO3-235ENST00000616247 A0A087WSZ3 146 aa4.35□□□□□ -1.71
LMO3-235ENST00000616247 Q8NBF4 154 aa4.35□□□□□ -1.71
LMO3-235ENST00000616247 J3QKU1 62 aa4.35□□□□□ -1.71
LMO3-235ENST00000616247 PKD1L1Q8TDX9 2849 aa4.35□□□□□ -1.71
LMO3-235ENST00000616247 A6NED7 52 aa4.34□□□□□ -1.71
LMO3-235ENST00000616247 DSCR10P59022 87 aa4.34□□□□□ -1.71
LMO3-235ENST00000616247 C15orf56Q8N910 161 aa4.34□□□□□ -1.71
LMO3-235ENST00000616247 DHRS4-AS1Q9P1J3 65 aa4.34□□□□□ -1.71
LMO3-235ENST00000616247 XP32Q5T750 250 aa4.34□□□□□ -1.71
LMO3-235ENST00000616247 Q8NAQ8 132 aa4.34□□□□□ -1.71
LMO3-235ENST00000616247 B9D2Q9BPU9 175 aa4.34□□□□□ -1.71
LMO3-235ENST00000616247 IGKV2-24A0A0C4DH68 120 aa4.34□□□□□ -1.72
LMO3-235ENST00000616247 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.72
LMO3-235ENST00000616247 PRR15Q8IV56 129 aa4.33□□□□□ -1.72
LMO3-235ENST00000616247 KRTAP10-3P60369 221 aa4.33□□□□□ -1.72
LMO3-235ENST00000616247 Q6ZRX8 168 aa4.33□□□□□ -1.72
LMO3-235ENST00000616247 NDUFB1O75438 58 aa4.33□□□□□ -1.72
LMO3-235ENST00000616247 Q1T7F1 81 aa4.33□□□□□ -1.72
LMO3-235ENST00000616247 Q9BRP9 147 aa4.33□□□□□ -1.72
LMO3-235ENST00000616247 IGLV5-48A0A075B6I7 105 aa4.32□□□□□ -1.72
LMO3-235ENST00000616247 H0Y9P7 68 aa4.32□□□□□ -1.72
LMO3-235ENST00000616247 LINC00476Q8WZB0 136 aa4.32□□□□□ -1.72
LMO3-235ENST00000616247 KCNQ1DNQ9H478 68 aa4.32□□□□□ -1.72
LMO3-235ENST00000616247 NOTCH1P46531 2555 aa4.32□□□□□ -1.72
LMO3-235ENST00000616247 H0Y9J4 135 aa4.32□□□□□ -1.72
LMO3-235ENST00000616247 PRLHP81277 87 aa4.32□□□□□ -1.72
LMO3-235ENST00000616247 PCOTHQ58A44 107 aa4.32□□□□□ -1.72
LMO3-235ENST00000616247 FLNBO75369 2602 aaKnown RBP4.31□□□□□ -1.72
LMO3-235ENST00000616247 KRTAP1-3Q8IUG1 177 aa4.31□□□□□ -1.72
LMO3-235ENST00000616247 MAST4O15021 2626 aa4.31□□□□□ -1.72
LMO3-235ENST00000616247 CASC2Q6XLA1 102 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms