RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 PRAC1Q96KF2 57 aa6.33□□□□□ -1.4
COL12A1-211ENST00000615798 SPINK7P58062 85 aa6.33□□□□□ -1.4
COL12A1-211ENST00000615798 IGLV6-57P01721 117 aa6.32□□□□□ -1.4
COL12A1-211ENST00000615798 LINC00588Q9Y4M8 146 aa6.31□□□□□ -1.4
COL12A1-211ENST00000615798 FHL3Q13643 280 aa6.31□□□□□ -1.4
COL12A1-211ENST00000615798 ASB16-AS1Q495Z4 193 aa6.3□□□□□ -1.4
COL12A1-211ENST00000615798 IGHV3OR16-9A0A0B4J2B5 98 aa6.3□□□□□ -1.4
COL12A1-211ENST00000615798 IGLV5-48A0A075B6I7 105 aa6.29□□□□□ -1.4
COL12A1-211ENST00000615798 H3BNG1 76 aa6.29□□□□□ -1.4
COL12A1-211ENST00000615798 LY6G6CO95867 125 aa6.29□□□□□ -1.4
COL12A1-211ENST00000615798 LINC00167Q96N53 147 aa6.29□□□□□ -1.4
COL12A1-211ENST00000615798 USP9YO00507 2555 aaPredicted RBP6.28□□□□□ -1.4
COL12A1-211ENST00000615798 Q5XG85 94 aa6.28□□□□□ -1.4
COL12A1-211ENST00000615798 ST20-AS1Q8NBB2 130 aa6.28□□□□□ -1.4
COL12A1-211ENST00000615798 A0A1B0GU33 70 aa6.28□□□□□ -1.4
COL12A1-211ENST00000615798 A0A1B0GVX0 72 aa6.27□□□□□ -1.41
COL12A1-211ENST00000615798 SRCAPQ6ZRS2 3230 aa6.27□□□□□ -1.41
COL12A1-211ENST00000615798 Q6ZRP5 223 aa6.26□□□□□ -1.41
COL12A1-211ENST00000615798 C16orf90A8MZG2 172 aa6.26□□□□□ -1.41
COL12A1-211ENST00000615798 A0A1W2PPR1 153 aa6.25□□□□□ -1.41
COL12A1-211ENST00000615798 Q6ZSN1 163 aa6.24□□□□□ -1.41
COL12A1-211ENST00000615798 TYMSOSQ8TAI1 123 aa6.24□□□□□ -1.41
COL12A1-211ENST00000615798 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
COL12A1-211ENST00000615798 CENPFP49454 3210 aa6.22□□□□□ -1.41
COL12A1-211ENST00000615798 GVQW2A0A096LPI5 108 aaPredicted RBP6.2□□□□□ -1.42
COL12A1-211ENST00000615798 HECTD1Q9ULT8 2610 aa6.2□□□□□ -1.42
COL12A1-211ENST00000615798 C18orf65Q6ZTR6 163 aa6.19□□□□□ -1.42
COL12A1-211ENST00000615798 LITAFQ99732 161 aa6.19□□□□□ -1.42
COL12A1-211ENST00000615798 C9orf163Q8N9P6 203 aa6.19□□□□□ -1.42
COL12A1-211ENST00000615798 ZNF575Q86XF7 245 aa6.18□□□□□ -1.42
COL12A1-211ENST00000615798 DSCR10P59022 87 aa6.18□□□□□ -1.42
COL12A1-211ENST00000615798 Q5VV11 94 aa6.17□□□□□ -1.42
COL12A1-211ENST00000615798 PHF5AQ7RTV0 110 aaKnown RBP6.17□□□□□ -1.42
COL12A1-211ENST00000615798 OBSCN-AS1Q96MR7 158 aa6.17□□□□□ -1.42
COL12A1-211ENST00000615798 ROMO1P60602 79 aa6.17□□□□□ -1.42
COL12A1-211ENST00000615798 Q8N9P0 234 aaPredicted RBP6.17□□□□□ -1.42
COL12A1-211ENST00000615798 OCR1Q9BZK8 76 aa6.16□□□□□ -1.42
COL12A1-211ENST00000615798 INAFM1C9JVW0 142 aa6.16□□□□□ -1.42
COL12A1-211ENST00000615798 COX6B2Q6YFQ2 88 aa6.16□□□□□ -1.42
COL12A1-211ENST00000615798 FP248Q71RG6 208 aaPredicted RBP6.16□□□□□ -1.42
COL12A1-211ENST00000615798 FAM229BQ4G0N7 80 aa6.15□□□□□ -1.42
COL12A1-211ENST00000615798 IGFL1Q6UW32 110 aa6.15□□□□□ -1.43
COL12A1-211ENST00000615798 STAB1Q9NY15 2570 aa6.15□□□□□ -1.43
COL12A1-211ENST00000615798 BPTFQ12830 3046 aa6.14□□□□□ -1.43
COL12A1-211ENST00000615798 IGLV5-37A0A075B6J1 123 aa6.13□□□□□ -1.43
COL12A1-211ENST00000615798 KCNQ1DNQ9H478 68 aa6.13□□□□□ -1.43
COL12A1-211ENST00000615798 C15orf56Q8N910 161 aa6.12□□□□□ -1.43
COL12A1-211ENST00000615798 PRR26Q8N8Z3 221 aa6.12□□□□□ -1.43
COL12A1-211ENST00000615798 Q8N1X5 172 aa6.12□□□□□ -1.43
COL12A1-211ENST00000615798 GOLGB1Q14789 3259 aaKnown RBP6.12□□□□□ -1.43
COL12A1-211ENST00000615798 Q8NAQ8 132 aa6.1□□□□□ -1.43
COL12A1-211ENST00000615798 HRES1P13985 223 aa6.1□□□□□ -1.43
COL12A1-211ENST00000615798 CENPEQ02224 2701 aa6.09□□□□□ -1.43
COL12A1-211ENST00000615798 LINC00528Q8N1L1 170 aa6.09□□□□□ -1.44
COL12A1-211ENST00000615798 PRRC2CQ9Y520 2896 aaKnown RBP6.08□□□□□ -1.44
COL12A1-211ENST00000615798 H1FX-AS1Q4G0G2 97 aa6.08□□□□□ -1.44
COL12A1-211ENST00000615798 PSORS1C2Q9UIG4 136 aa6.07□□□□□ -1.44
COL12A1-211ENST00000615798 LINC00612Q8N6U2 182 aa6.06□□□□□ -1.44
COL12A1-211ENST00000615798 PLAC4Q8WY50 150 aa6.05□□□□□ -1.44
COL12A1-211ENST00000615798 DNAH12Q6ZR08 3092 aa6.05□□□□□ -1.44
COL12A1-211ENST00000615798 AKAP13Q12802 2813 aa6.05□□□□□ -1.44
COL12A1-211ENST00000615798 LINC00304Q8N9R0 145 aa6.05□□□□□ -1.44
COL12A1-211ENST00000615798 RTL8CO15255 209 aa6.04□□□□□ -1.44
COL12A1-211ENST00000615798 PRR34Q9NV39 138 aa6.04□□□□□ -1.44
COL12A1-211ENST00000615798 TRANK1O15050 2925 aa6.03□□□□□ -1.44
COL12A1-211ENST00000615798 Q8N377 158 aa6.03□□□□□ -1.44
COL12A1-211ENST00000615798 BAHCC1Q9P281 2608 aa6.03□□□□□ -1.44
COL12A1-211ENST00000615798 IGLV1-50A0A075B6I6 118 aa6.03□□□□□ -1.44
COL12A1-211ENST00000615798 KRTAP10-9P60411 292 aa6.03□□□□□ -1.44
COL12A1-211ENST00000615798 TNP2Q05952 138 aa6.02□□□□□ -1.45
COL12A1-211ENST00000615798 NDUFAF8A1L188 74 aa6.01□□□□□ -1.45
COL12A1-211ENST00000615798 C19orf73Q9NVV2 129 aa6.01□□□□□ -1.45
COL12A1-211ENST00000615798 A0A096LNT2 108 aa6□□□□□ -1.45
COL12A1-211ENST00000615798 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6□□□□□ -1.45
COL12A1-211ENST00000615798 MGAM2Q2M2H8 2515 aa6□□□□□ -1.45
COL12A1-211ENST00000615798 C9orf92A6NGG3 77 aa6□□□□□ -1.45
COL12A1-211ENST00000615798 FAM168BA1KXE4 195 aa6□□□□□ -1.45
COL12A1-211ENST00000615798 DNAH10OSP0CZ25 163 aa6□□□□□ -1.45
COL12A1-211ENST00000615798 STAB2Q8WWQ8 2551 aa5.99□□□□□ -1.45
COL12A1-211ENST00000615798 NBEAL1Q6ZS30 2694 aa5.99□□□□□ -1.45
COL12A1-211ENST00000615798 NOTCH1P46531 2555 aa5.99□□□□□ -1.45
COL12A1-211ENST00000615798 RPL37P61927 97 aaKnown RBP5.99□□□□□ -1.45
COL12A1-211ENST00000615798 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
COL12A1-211ENST00000615798 S4R3F8 94 aa5.94□□□□□ -1.46
COL12A1-211ENST00000615798 ZNF861PO60384 105 aa5.93□□□□□ -1.46
COL12A1-211ENST00000615798 J3QL48 77 aa5.93□□□□□ -1.46
COL12A1-211ENST00000615798 CHD9Q3L8U1 2897 aa5.93□□□□□ -1.46
COL12A1-211ENST00000615798 A0A1W2PNM2 257 aa5.92□□□□□ -1.46
COL12A1-211ENST00000615798 CHD7Q9P2D1 2997 aa5.92□□□□□ -1.46
COL12A1-211ENST00000615798 A6NN06 94 aa5.9□□□□□ -1.46
COL12A1-211ENST00000615798 GIG44P09565 113 aaPredicted RBP5.9□□□□□ -1.47
COL12A1-211ENST00000615798 SPRR4Q96PI1 79 aa5.9□□□□□ -1.47
COL12A1-211ENST00000615798 CEP350Q5VT06 3117 aa5.9□□□□□ -1.47
COL12A1-211ENST00000615798 CYSTM1Q9H1C7 97 aa5.89□□□□□ -1.47
COL12A1-211ENST00000615798 NSD1Q96L73 2696 aaPredicted RBP5.89□□□□□ -1.47
COL12A1-211ENST00000615798 OXTP01178 125 aa5.88□□□□□ -1.47
COL12A1-211ENST00000615798 NBDYA0A0U1RRE5 68 aa5.87□□□□□ -1.47
COL12A1-211ENST00000615798 CNBPP62633 177 aaKnown RBP5.87□□□□□ -1.47
COL12A1-211ENST00000615798 A0A0G2JQZ4 141 aa5.86□□□□□ -1.47
COL12A1-211ENST00000615798 A0A1W2PNN7 141 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms