RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 A8MUN3 132 aa9.7□□□□□ -0.86
SNPH-203ENST00000614659 BPTFQ12830 3046 aa9.7□□□□□ -0.86
SNPH-203ENST00000614659 A8MWP4 228 aa9.7□□□□□ -0.86
SNPH-203ENST00000614659 WIPF1O43516 503 aa9.7□□□□□ -0.86
SNPH-203ENST00000614659 OBSCN-AS1Q96MR7 158 aa9.68□□□□□ -0.86
SNPH-203ENST00000614659 POLQO75417 2590 aa9.68□□□□□ -0.86
SNPH-203ENST00000614659 COA5Q86WW8 74 aa9.68□□□□□ -0.86
SNPH-203ENST00000614659 LOC101927531A0A1B0GV80 90 aa9.67□□□□□ -0.86
SNPH-203ENST00000614659 ACANP16112 2415 aa9.66□□□□□ -0.86
SNPH-203ENST00000614659 K7EQZ3 153 aa9.66□□□□□ -0.86
SNPH-203ENST00000614659 C9orf129Q5T035 196 aaKnown RBP9.65□□□□□ -0.86
SNPH-203ENST00000614659 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
SNPH-203ENST00000614659 CHD7Q9P2D1 2997 aa9.64□□□□□ -0.87
SNPH-203ENST00000614659 CHD9Q3L8U1 2897 aa9.64□□□□□ -0.87
SNPH-203ENST00000614659 C9orf163Q8N9P6 203 aa9.63□□□□□ -0.87
SNPH-203ENST00000614659 IGLV5-37A0A075B6J1 123 aa9.62□□□□□ -0.87
SNPH-203ENST00000614659 H7BZZ5 65 aa9.62□□□□□ -0.87
SNPH-203ENST00000614659 CHTF8P0CG12 524 aa9.62□□□□□ -0.87
SNPH-203ENST00000614659 Q8N377 158 aa9.62□□□□□ -0.87
SNPH-203ENST00000614659 LINC00313P59037 77 aa9.62□□□□□ -0.87
SNPH-203ENST00000614659 SETD2Q9BYW2 2564 aaPredicted RBP9.61□□□□□ -0.87
SNPH-203ENST00000614659 FAM104AQ969W3 186 aa9.61□□□□□ -0.87
SNPH-203ENST00000614659 IGFL1Q6UW32 110 aa9.6□□□□□ -0.87
SNPH-203ENST00000614659 SSBP3-AS1Q7Z2R9 100 aa9.6□□□□□ -0.87
SNPH-203ENST00000614659 KTN1-AS1Q86SY8 53 aa9.6□□□□□ -0.87
SNPH-203ENST00000614659 CNBPP62633 177 aaKnown RBP9.59□□□□□ -0.87
SNPH-203ENST00000614659 ZNF861PO60384 105 aa9.58□□□□□ -0.88
SNPH-203ENST00000614659 MRPL34Q9BQ48 92 aaKnown RBP9.57□□□□□ -0.88
SNPH-203ENST00000614659 IGLV8-61A0A075B6I0 122 aa9.57□□□□□ -0.88
SNPH-203ENST00000614659 PRR15Q8IV56 129 aa9.57□□□□□ -0.88
SNPH-203ENST00000614659 HECTD1Q9ULT8 2610 aa9.57□□□□□ -0.88
SNPH-203ENST00000614659 FLNBO75369 2602 aaKnown RBP9.56□□□□□ -0.88
SNPH-203ENST00000614659 SPINT4Q6UDR6 99 aa9.56□□□□□ -0.88
SNPH-203ENST00000614659 LINC00304Q8N9R0 145 aa9.56□□□□□ -0.88
SNPH-203ENST00000614659 CEP350Q5VT06 3117 aa9.56□□□□□ -0.88
SNPH-203ENST00000614659 UQCR11O14957 56 aa9.55□□□□□ -0.88
SNPH-203ENST00000614659 HTTP42858 3142 aa9.55□□□□□ -0.88
SNPH-203ENST00000614659 LCA10Q71F78 164 aa9.55□□□□□ -0.88
SNPH-203ENST00000614659 CASC10Q5T4H9 136 aa9.54□□□□□ -0.88
SNPH-203ENST00000614659 TRANK1O15050 2925 aa9.54□□□□□ -0.88
SNPH-203ENST00000614659 IGLV5-48A0A075B6I7 105 aa9.52□□□□□ -0.88
SNPH-203ENST00000614659 C8orf17Q9NRJ1 99 aa9.5□□□□□ -0.89
SNPH-203ENST00000614659 UTRNP46939 3433 aa9.49□□□□□ -0.89
SNPH-203ENST00000614659 IGLV7-43P04211 117 aa9.49□□□□□ -0.89
SNPH-203ENST00000614659 MIR22HGQ0VDD5 57 aa9.48□□□□□ -0.89
SNPH-203ENST00000614659 A0A1B0GVX0 72 aa9.47□□□□□ -0.89
SNPH-203ENST00000614659 Q96NJ1 140 aa9.46□□□□□ -0.9
SNPH-203ENST00000614659 A0A1W2PNM2 257 aa9.46□□□□□ -0.9
SNPH-203ENST00000614659 SPANXA2-OT1Q8N9U9 137 aa9.43□□□□□ -0.9
SNPH-203ENST00000614659 HELZ2Q9BYK8 2649 aaKnown RBP9.43□□□□□ -0.9
SNPH-203ENST00000614659 SMR3BP02814 79 aaPredicted RBP9.42□□□□□ -0.9
SNPH-203ENST00000614659 COX6B2Q6YFQ2 88 aa9.41□□□□□ -0.9
SNPH-203ENST00000614659 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
SNPH-203ENST00000614659 SPRR4Q96PI1 79 aa9.4□□□□□ -0.9
SNPH-203ENST00000614659 CDC42SE1Q9NRR8 79 aa9.38□□□□□ -0.91
SNPH-203ENST00000614659 PSORS1C2Q9UIG4 136 aa9.38□□□□□ -0.91
SNPH-203ENST00000614659 TNP2Q05952 138 aa9.37□□□□□ -0.91
SNPH-203ENST00000614659 DSCR10P59022 87 aa9.36□□□□□ -0.91
SNPH-203ENST00000614659 Q1T7F1 81 aa9.35□□□□□ -0.91
SNPH-203ENST00000614659 OCR1Q9BZK8 76 aa9.34□□□□□ -0.91
SNPH-203ENST00000614659 CRIPTQ9P021 101 aa9.33□□□□□ -0.92
SNPH-203ENST00000614659 C5orf42Q9H799 3197 aa9.33□□□□□ -0.92
SNPH-203ENST00000614659 KRTAP21-3Q3LHN1 58 aa9.32□□□□□ -0.92
SNPH-203ENST00000614659 LCE6AA0A183 80 aa9.31□□□□□ -0.92
SNPH-203ENST00000614659 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
SNPH-203ENST00000614659 PRRC2CQ9Y520 2896 aaKnown RBP9.31□□□□□ -0.92
SNPH-203ENST00000614659 CR1P17927 2039 aa9.31□□□□□ -0.92
SNPH-203ENST00000614659 SPRR1AP35321 89 aa9.29□□□□□ -0.92
SNPH-203ENST00000614659 RBM12B-AS1Q9P1G2 102 aa9.28□□□□□ -0.92
SNPH-203ENST00000614659 FLNAP21333 2647 aaKnown RBP9.27□□□□□ -0.92
SNPH-203ENST00000614659 Q5XG85 94 aa9.27□□□□□ -0.93
SNPH-203ENST00000614659 FAM229BQ4G0N7 80 aa9.26□□□□□ -0.93
SNPH-203ENST00000614659 ITPR3Q14573 2671 aa9.23□□□□□ -0.93
SNPH-203ENST00000614659 H3BS24 57 aa9.23□□□□□ -0.93
SNPH-203ENST00000614659 PLAC8Q9NZF1 115 aa9.22□□□□□ -0.93
SNPH-203ENST00000614659 Q8NDZ9 215 aa9.21□□□□□ -0.93
SNPH-203ENST00000614659 SPRR1BP22528 89 aa9.19□□□□□ -0.94
SNPH-203ENST00000614659 Q75L30 129 aa9.18□□□□□ -0.94
SNPH-203ENST00000614659 MGAM2Q2M2H8 2515 aa9.18□□□□□ -0.94
SNPH-203ENST00000614659 C9orf92A6NGG3 77 aa9.18□□□□□ -0.94
SNPH-203ENST00000614659 KRTAP26-1Q6PEX3 210 aa9.17□□□□□ -0.94
SNPH-203ENST00000614659 PCNTO95613 3336 aa9.16□□□□□ -0.94
SNPH-203ENST00000614659 ZNF292O60281 2723 aa9.15□□□□□ -0.94
SNPH-203ENST00000614659 USP24Q9UPU5 2620 aa9.15□□□□□ -0.94
SNPH-203ENST00000614659 IGLV7-46A0A075B6I9 117 aa9.15□□□□□ -0.94
SNPH-203ENST00000614659 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
SNPH-203ENST00000614659 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.13□□□□□ -0.95
SNPH-203ENST00000614659 LINC01554Q52M75 96 aa9.12□□□□□ -0.95
SNPH-203ENST00000614659 CFAP46Q8IYW2 2715 aa9.11□□□□□ -0.95
SNPH-203ENST00000614659 PRR26Q8N8Z3 221 aa9.11□□□□□ -0.95
SNPH-203ENST00000614659 FP248Q71RG6 208 aaPredicted RBP9.11□□□□□ -0.95
SNPH-203ENST00000614659 CYSTM1Q9H1C7 97 aa9.09□□□□□ -0.95
SNPH-203ENST00000614659 Q6ZSA8 131 aa9.09□□□□□ -0.95
SNPH-203ENST00000614659 MMP24-AS1A0A0U1RRL7 71 aa9.09□□□□□ -0.96
SNPH-203ENST00000614659 Q8N1X5 172 aa9.08□□□□□ -0.96
SNPH-203ENST00000614659 LINC01558Q9Y6Z2 57 aa9.08□□□□□ -0.96
SNPH-203ENST00000614659 RANBP2P49792 3224 aaKnown RBP9.06□□□□□ -0.96
SNPH-203ENST00000614659 Q8N9P0 234 aaPredicted RBP9.06□□□□□ -0.96
SNPH-203ENST00000614659 MAST4O15021 2626 aa9.06□□□□□ -0.96
SNPH-203ENST00000614659 LINC00472Q9H8W2 130 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms