RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 C1orf137Q5JT78 98 aa8.38□□□□□ -1.07
MSH6-213ENST00000614496 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.38□□□□□ -1.07
MSH6-213ENST00000614496 TMEM254Q8TBM7 123 aa8.38□□□□□ -1.07
MSH6-213ENST00000614496 C7orf33Q8WU49 177 aa8.38□□□□□ -1.07
MSH6-213ENST00000614496 CSMD2Q7Z408 3487 aa8.37□□□□□ -1.07
MSH6-213ENST00000614496 LRCOL1A6NCL2 159 aa8.37□□□□□ -1.07
MSH6-213ENST00000614496 Q6ZRP5 223 aa8.37□□□□□ -1.07
MSH6-213ENST00000614496 PRR34Q9NV39 138 aa8.37□□□□□ -1.07
MSH6-213ENST00000614496 DHRS4-AS1Q9P1J3 65 aa8.36□□□□□ -1.07
MSH6-213ENST00000614496 DEFB116Q30KQ4 102 aa8.36□□□□□ -1.07
MSH6-213ENST00000614496 WFDC13Q8IUB5 93 aa8.36□□□□□ -1.07
MSH6-213ENST00000614496 NOTCH1P46531 2555 aa8.36□□□□□ -1.07
MSH6-213ENST00000614496 NDUFC1O43677 76 aa8.35□□□□□ -1.07
MSH6-213ENST00000614496 GVQW2A0A096LPI5 108 aaPredicted RBP8.34□□□□□ -1.07
MSH6-213ENST00000614496 C1orf195Q5TG92 126 aa8.34□□□□□ -1.07
MSH6-213ENST00000614496 SEC61GP60059 68 aa8.34□□□□□ -1.07
MSH6-213ENST00000614496 MRPL55Q7Z7F7 128 aaKnown RBP8.34□□□□□ -1.07
MSH6-213ENST00000614496 MGAM2Q2M2H8 2515 aa8.33□□□□□ -1.08
MSH6-213ENST00000614496 SMIM26A0A096LP01 95 aa8.33□□□□□ -1.08
MSH6-213ENST00000614496 ZFHX3Q15911 3703 aa8.33□□□□□ -1.08
MSH6-213ENST00000614496 PRYO14603 147 aa8.32□□□□□ -1.08
MSH6-213ENST00000614496 ST20-AS1Q8NBB2 130 aa8.32□□□□□ -1.08
MSH6-213ENST00000614496 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
MSH6-213ENST00000614496 TRBV7-6A0A0J9YX20 115 aa8.31□□□□□ -1.08
MSH6-213ENST00000614496 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
MSH6-213ENST00000614496 FAM168BA1KXE4 195 aa8.31□□□□□ -1.08
MSH6-213ENST00000614496 UBE2AP49459 152 aa8.31□□□□□ -1.08
MSH6-213ENST00000614496 C15orf56Q8N910 161 aa8.3□□□□□ -1.08
MSH6-213ENST00000614496 MP68P56378 58 aa8.3□□□□□ -1.08
MSH6-213ENST00000614496 SMIM29Q86T20 159 aa8.3□□□□□ -1.08
MSH6-213ENST00000614496 VPS13CQ709C8 3753 aa8.3□□□□□ -1.08
MSH6-213ENST00000614496 TRBV7-4A0A0J9YYF1 115 aa8.29□□□□□ -1.08
MSH6-213ENST00000614496 H7BZZ5 65 aa8.29□□□□□ -1.08
MSH6-213ENST00000614496 LINC01556Q5JQF7 62 aa8.29□□□□□ -1.08
MSH6-213ENST00000614496 PRLHP81277 87 aa8.28□□□□□ -1.08
MSH6-213ENST00000614496 HIVEP1P15822 2718 aa8.28□□□□□ -1.08
MSH6-213ENST00000614496 H0Y9J4 135 aa8.27□□□□□ -1.09
MSH6-213ENST00000614496 SPTSSBQ8NFR3 76 aa8.27□□□□□ -1.09
MSH6-213ENST00000614496 BCE1O60756 84 aa8.26□□□□□ -1.09
MSH6-213ENST00000614496 ATP5EP56381 51 aaPredicted RBP8.26□□□□□ -1.09
MSH6-213ENST00000614496 STAB1Q9NY15 2570 aa8.26□□□□□ -1.09
MSH6-213ENST00000614496 REG3GQ6UW15 175 aa8.25□□□□□ -1.09
MSH6-213ENST00000614496 A0A087WSZ3 146 aa8.25□□□□□ -1.09
MSH6-213ENST00000614496 A0A0G2JQZ4 141 aa8.25□□□□□ -1.09
MSH6-213ENST00000614496 A0A1W2PNN7 141 aa8.25□□□□□ -1.09
MSH6-213ENST00000614496 LINC00474Q9P2X8 69 aa8.25□□□□□ -1.09
MSH6-213ENST00000614496 NDUFS5O43920 106 aa8.24□□□□□ -1.09
MSH6-213ENST00000614496 Q8N377 158 aa8.24□□□□□ -1.09
MSH6-213ENST00000614496 KLKP1Q107X0 134 aa8.24□□□□□ -1.09
MSH6-213ENST00000614496 Q6ZRX8 168 aa8.24□□□□□ -1.09
MSH6-213ENST00000614496 CDK2AP2O75956 126 aa8.23□□□□□ -1.09
MSH6-213ENST00000614496 KRTAP10-11P60412 298 aa8.23□□□□□ -1.09
MSH6-213ENST00000614496 H3BNG1 76 aa8.22□□□□□ -1.09
MSH6-213ENST00000614496 OXTP01178 125 aa8.22□□□□□ -1.09
MSH6-213ENST00000614496 BAHCC1Q9P281 2608 aa8.22□□□□□ -1.09
MSH6-213ENST00000614496 IGKV4-1P06312 121 aa8.21□□□□□ -1.09
MSH6-213ENST00000614496 CASC10Q5T4H9 136 aa8.21□□□□□ -1.09
MSH6-213ENST00000614496 Q8NBF4 154 aa8.2□□□□□ -1.1
MSH6-213ENST00000614496 LINC00208Q96KT6 92 aa8.2□□□□□ -1.1
MSH6-213ENST00000614496 KCNQ1DNQ9H478 68 aa8.2□□□□□ -1.1
MSH6-213ENST00000614496 LINC00588Q9Y4M8 146 aa8.2□□□□□ -1.1
MSH6-213ENST00000614496 NBEAL1Q6ZS30 2694 aa8.19□□□□□ -1.1
MSH6-213ENST00000614496 NDUFB1O75438 58 aa8.18□□□□□ -1.1
MSH6-213ENST00000614496 F8WDY8 70 aa8.18□□□□□ -1.1
MSH6-213ENST00000614496 COL6A5A8TX70 2615 aa8.18□□□□□ -1.1
MSH6-213ENST00000614496 LINC00476Q8WZB0 136 aa8.18□□□□□ -1.1
MSH6-213ENST00000614496 Q9BRP9 147 aa8.18□□□□□ -1.1
MSH6-213ENST00000614496 K7EQZ3 153 aa8.17□□□□□ -1.1
MSH6-213ENST00000614496 ERC2-IT1O76042 136 aa8.17□□□□□ -1.1
MSH6-213ENST00000614496 HCG22E2RYF7 251 aa8.17□□□□□ -1.1
MSH6-213ENST00000614496 B9D2Q9BPU9 175 aa8.17□□□□□ -1.1
MSH6-213ENST00000614496 PSPHP1O15172 72 aa8.16□□□□□ -1.1
MSH6-213ENST00000614496 A0A1W2PNM2 257 aa8.16□□□□□ -1.1
MSH6-213ENST00000614496 IGLV1-50A0A075B6I6 118 aa8.15□□□□□ -1.1
MSH6-213ENST00000614496 RPL37AP61513 92 aaKnown RBP8.15□□□□□ -1.1
MSH6-213ENST00000614496 KRTAP24-1Q3LI83 254 aa8.15□□□□□ -1.1
MSH6-213ENST00000614496 LINC00336Q6ZUF6 198 aa8.15□□□□□ -1.1
MSH6-213ENST00000614496 IGLV9-49A0A0B4J1Y8 123 aa8.14□□□□□ -1.11
MSH6-213ENST00000614496 DNAH10OSP0CZ25 163 aa8.14□□□□□ -1.11
MSH6-213ENST00000614496 NSD1Q96L73 2696 aaPredicted RBP8.14□□□□□ -1.11
MSH6-213ENST00000614496 VWFP04275 2813 aa8.13□□□□□ -1.11
MSH6-213ENST00000614496 CHTF8P0CG12 524 aa8.13□□□□□ -1.11
MSH6-213ENST00000614496 Q5XG85 94 aa8.12□□□□□ -1.11
MSH6-213ENST00000614496 PRO0628Q9UI54 55 aa8.12□□□□□ -1.11
MSH6-213ENST00000614496 CASC2Q6XLA1 102 aa8.11□□□□□ -1.11
MSH6-213ENST00000614496 C14orf177Q52M58 125 aa8.11□□□□□ -1.11
MSH6-213ENST00000614496 PHF5AQ7RTV0 110 aaKnown RBP8.1□□□□□ -1.11
MSH6-213ENST00000614496 KRTAP26-1Q6PEX3 210 aa8.08□□□□□ -1.12
MSH6-213ENST00000614496 OCR1Q9BZK8 76 aa8.08□□□□□ -1.12
MSH6-213ENST00000614496 H0Y9P7 68 aa8.08□□□□□ -1.12
MSH6-213ENST00000614496 IGLV5-48A0A075B6I7 105 aa8.07□□□□□ -1.12
MSH6-213ENST00000614496 IGFL1Q6UW32 110 aa8.07□□□□□ -1.12
MSH6-213ENST00000614496 TENM1Q9UKZ4 2725 aa8.07□□□□□ -1.12
MSH6-213ENST00000614496 SPINK6Q6UWN8 80 aa8.07□□□□□ -1.12
MSH6-213ENST00000614496 PCOTHQ58A44 107 aa8.06□□□□□ -1.12
MSH6-213ENST00000614496 PMAIP1Q13794 54 aa8.05□□□□□ -1.12
MSH6-213ENST00000614496 A0A1B0GW54 56 aa8.04□□□□□ -1.12
MSH6-213ENST00000614496 EPM2AB3EWF7 344 aa8.04□□□□□ -1.12
MSH6-213ENST00000614496 TLX1NBP0CAT3 122 aa8.03□□□□□ -1.12
MSH6-213ENST00000614496 FP248Q71RG6 208 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms