RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 S100A7L2Q5SY68 101 aa7.2□□□□□ -1.26
SLIRP-212ENST00000613856 MRPL55Q7Z7F7 128 aaKnown RBP7.2□□□□□ -1.26
SLIRP-212ENST00000613856 OR13C6PQ8NH95 151 aa7.2□□□□□ -1.26
SLIRP-212ENST00000613856 C7orf33Q8WU49 177 aa7.2□□□□□ -1.26
SLIRP-212ENST00000613856 PLAC8Q9NZF1 115 aa7.2□□□□□ -1.26
SLIRP-212ENST00000613856 CBY1Q9Y3M2 126 aa7.2□□□□□ -1.26
SLIRP-212ENST00000613856 TRBV10-3A0A0K0K1G6 114 aa7.19□□□□□ -1.26
SLIRP-212ENST00000613856 C9orf118A6NHY6 69 aa7.19□□□□□ -1.26
SLIRP-212ENST00000613856 LRP1Q07954 4544 aaKnown RBP7.19□□□□□ -1.26
SLIRP-212ENST00000613856 A0A087WYN8 130 aa7.18□□□□□ -1.26
SLIRP-212ENST00000613856 RPL28P46779 137 aaKnown RBP7.18□□□□□ -1.26
SLIRP-212ENST00000613856 Q1RN00 199 aa7.18□□□□□ -1.26
SLIRP-212ENST00000613856 TRAV23DV6A0A075B6W5 121 aa7.17□□□□□ -1.26
SLIRP-212ENST00000613856 H7C2G1 150 aa7.17□□□□□ -1.26
SLIRP-212ENST00000613856 SMIM11BQ8TCY0 68 aa7.17□□□□□ -1.26
SLIRP-212ENST00000613856 LINC00167Q96N53 147 aa7.17□□□□□ -1.26
SLIRP-212ENST00000613856 KCNQ1DNQ9H478 68 aa7.17□□□□□ -1.26
SLIRP-212ENST00000613856 IGLV1-50A0A075B6I6 118 aa7.16□□□□□ -1.26
SLIRP-212ENST00000613856 GAGE10A6NGK3 116 aa7.16□□□□□ -1.26
SLIRP-212ENST00000613856 PRYO14603 147 aa7.16□□□□□ -1.26
SLIRP-212ENST00000613856 FAM30AQ9NZY2 134 aa7.16□□□□□ -1.26
SLIRP-212ENST00000613856 H3BUT2 72 aa7.15□□□□□ -1.26
SLIRP-212ENST00000613856 TRIAP1O43715 76 aa7.15□□□□□ -1.26
SLIRP-212ENST00000613856 PHF5AQ7RTV0 110 aaKnown RBP7.15□□□□□ -1.26
SLIRP-212ENST00000613856 DPH3Q96FX2 82 aa7.15□□□□□ -1.26
SLIRP-212ENST00000613856 A0A1W2PPM0 123 aa7.14□□□□□ -1.27
SLIRP-212ENST00000613856 FAM229AH3BQW9 127 aa7.14□□□□□ -1.27
SLIRP-212ENST00000613856 PSMB2P49721 201 aa7.14□□□□□ -1.27
SLIRP-212ENST00000613856 LYRM7Q5U5X0 104 aa7.14□□□□□ -1.27
SLIRP-212ENST00000613856 NAA38Q9BRA0 125 aaKnown RBP7.14□□□□□ -1.27
SLIRP-212ENST00000613856 TRBV7-6A0A0J9YX20 115 aa7.13□□□□□ -1.27
SLIRP-212ENST00000613856 RPL37AP8A6NKH3 93 aa7.13□□□□□ -1.27
SLIRP-212ENST00000613856 KRTAP29-1A8MX34 341 aaPredicted RBP7.13□□□□□ -1.27
SLIRP-212ENST00000613856 ZNF73O43830 326 aaPredicted RBP7.13□□□□□ -1.27
SLIRP-212ENST00000613856 COX6CP09669 75 aa7.13□□□□□ -1.27
SLIRP-212ENST00000613856 SPRR1AP35321 89 aa7.13□□□□□ -1.27
SLIRP-212ENST00000613856 SCXQ7RTU7 201 aa7.13□□□□□ -1.27
SLIRP-212ENST00000613856 DIRC1Q969H9 104 aa7.13□□□□□ -1.27
SLIRP-212ENST00000613856 UBE2BP63146 152 aa7.12□□□□□ -1.27
SLIRP-212ENST00000613856 C6orf99Q4VX62 202 aa7.12□□□□□ -1.27
SLIRP-212ENST00000613856 CIRBP-AS1Q8TBR5 109 aa7.12□□□□□ -1.27
SLIRP-212ENST00000613856 FABP2P12104 132 aa7.11□□□□□ -1.27
SLIRP-212ENST00000613856 KRTAP4-16G5E9R7 235 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-212ENST00000613856 H0YGX0 51 aa7.1□□□□□ -1.27
SLIRP-212ENST00000613856 VAMP3Q15836 100 aa7.1□□□□□ -1.27
SLIRP-212ENST00000613856 REG3GQ6UW15 175 aa7.1□□□□□ -1.27
SLIRP-212ENST00000613856 KRTAP11-1Q8IUC1 163 aa7.1□□□□□ -1.27
SLIRP-212ENST00000613856 FAT3Q8TDW7 4589 aa7.09□□□□□ -1.27
SLIRP-212ENST00000613856 SCGB1C2P0DMR2 95 aa7.09□□□□□ -1.27
SLIRP-212ENST00000613856 ELOF1P60002 83 aaKnown RBP7.09□□□□□ -1.27
SLIRP-212ENST00000613856 TRBV20-1A0A075B6N2 111 aa7.08□□□□□ -1.28
SLIRP-212ENST00000613856 COX7BP24311 80 aa7.08□□□□□ -1.28
SLIRP-212ENST00000613856 ETDCA0A1B0GVM5 59 aa7.07□□□□□ -1.28
SLIRP-212ENST00000613856 LINC00528Q8N1L1 170 aa7.07□□□□□ -1.28
SLIRP-212ENST00000613856 SPCS1Q9Y6A9 102 aa7.07□□□□□ -1.28
SLIRP-212ENST00000613856 A0A1B0GV90 55 aa7.06□□□□□ -1.28
SLIRP-212ENST00000613856 A0A1B0GX51 115 aa7.06□□□□□ -1.28
SLIRP-212ENST00000613856 B5MCH6 92 aa7.06□□□□□ -1.28
SLIRP-212ENST00000613856 K7EP34 96 aa7.06□□□□□ -1.28
SLIRP-212ENST00000613856 LST1O00453 97 aa7.06□□□□□ -1.28
SLIRP-212ENST00000613856 BCE1O60756 84 aa7.06□□□□□ -1.28
SLIRP-212ENST00000613856 TCL1BO95988 128 aa7.06□□□□□ -1.28
SLIRP-212ENST00000613856 Q6ZRX8 168 aa7.06□□□□□ -1.28
SLIRP-212ENST00000613856 CLEC2BQ92478 149 aa7.06□□□□□ -1.28
SLIRP-212ENST00000613856 H0Y9J4 135 aa7.05□□□□□ -1.28
SLIRP-212ENST00000613856 ATXN8Q156A1 80 aa7.05□□□□□ -1.28
SLIRP-212ENST00000613856 LINC00575Q6W349 94 aa7.05□□□□□ -1.28
SLIRP-212ENST00000613856 FAM218AQ96MZ4 157 aa7.05□□□□□ -1.28
SLIRP-212ENST00000613856 PSORS1C2Q9UIG4 136 aa7.05□□□□□ -1.28
SLIRP-212ENST00000613856 TRACP01848 142 aa7.04□□□□□ -1.28
SLIRP-212ENST00000613856 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
SLIRP-212ENST00000613856 GTF2H5Q6ZYL4 71 aa7.04□□□□□ -1.28
SLIRP-212ENST00000613856 FAM19A1Q7Z5A9 133 aa7.03□□□□□ -1.28
SLIRP-212ENST00000613856 KRTAP13-1Q8IUC0 172 aa7.03□□□□□ -1.28
SLIRP-212ENST00000613856 DHRS4-AS1Q9P1J3 65 aa7.03□□□□□ -1.28
SLIRP-212ENST00000613856 SLC25A20O43772 301 aa7.02□□□□□ -1.29
SLIRP-212ENST00000613856 SNCGO76070 127 aa7.02□□□□□ -1.29
SLIRP-212ENST00000613856 RNF213Q63HN8 5207 aa7.01□□□□□ -1.29
SLIRP-212ENST00000613856 hADV29S1A0JD25 119 aa7.01□□□□□ -1.29
SLIRP-212ENST00000613856 PLA2G1BP04054 148 aaKnown RBP7.01□□□□□ -1.29
SLIRP-212ENST00000613856 UBE2AP49459 152 aa7.01□□□□□ -1.29
SLIRP-212ENST00000613856 PRLHP81277 87 aa7.01□□□□□ -1.29
SLIRP-212ENST00000613856 C1orf137Q5JT78 98 aa7.01□□□□□ -1.29
SLIRP-212ENST00000613856 Q9BRP9 147 aa7.01□□□□□ -1.29
SLIRP-212ENST00000613856 H3BMG7 143 aa7□□□□□ -1.29
SLIRP-212ENST00000613856 DNAL4O96015 105 aa7□□□□□ -1.29
SLIRP-212ENST00000613856 SMCPP49901 116 aaPredicted RBP7□□□□□ -1.29
SLIRP-212ENST00000613856 SMCR5Q8TEV8 140 aa7□□□□□ -1.29
SLIRP-212ENST00000613856 LRP2P98164 4655 aa6.99□□□□□ -1.29
SLIRP-212ENST00000613856 UBE2V1Q13404 147 aa6.99□□□□□ -1.29
SLIRP-212ENST00000613856 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.99□□□□□ -1.29
SLIRP-212ENST00000613856 IGLV7-43P04211 117 aa6.98□□□□□ -1.29
SLIRP-212ENST00000613856 PKHD1L1Q86WI1 4243 aa6.98□□□□□ -1.29
SLIRP-212ENST00000613856 ZNF861PO60384 105 aa6.97□□□□□ -1.29
SLIRP-212ENST00000613856 OCIAD2Q56VL3 154 aa6.97□□□□□ -1.29
SLIRP-212ENST00000613856 C9JAW5 83 aa6.96□□□□□ -1.3
SLIRP-212ENST00000613856 H3BQ85 93 aa6.96□□□□□ -1.3
SLIRP-212ENST00000613856 Q6ZQY7 126 aa6.96□□□□□ -1.3
SLIRP-212ENST00000613856 LINC01600Q96MT4 127 aa6.96□□□□□ -1.3
SLIRP-212ENST00000613856 HIGD2AQ9BW72 106 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms