RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 Q6ZRP5 223 aa7.32□□□□□ -1.24
CDC42EP3-206ENST00000611976 LINC00528Q8N1L1 170 aa7.32□□□□□ -1.24
CDC42EP3-206ENST00000611976 C1orf64Q8NEQ6 169 aa7.32□□□□□ -1.24
CDC42EP3-206ENST00000611976 OBSCN-AS1Q96MR7 158 aa7.32□□□□□ -1.24
CDC42EP3-206ENST00000611976 HECTD1Q9ULT8 2610 aa7.32□□□□□ -1.24
CDC42EP3-206ENST00000611976 H3BPC8 53 aa7.32□□□□□ -1.24
CDC42EP3-206ENST00000611976 LINC00476Q8WZB0 136 aa7.31□□□□□ -1.24
CDC42EP3-206ENST00000611976 PCOTHQ58A44 107 aa7.31□□□□□ -1.24
CDC42EP3-206ENST00000611976 LIMD2Q9BT23 127 aa7.31□□□□□ -1.24
CDC42EP3-206ENST00000611976 ATMQ13315 3056 aa7.31□□□□□ -1.24
CDC42EP3-206ENST00000611976 ADGRG4Q8IZF6 3080 aa7.31□□□□□ -1.24
CDC42EP3-206ENST00000611976 C9orf129Q5T035 196 aaKnown RBP7.3□□□□□ -1.24
CDC42EP3-206ENST00000611976 TRBV7-4A0A0J9YYF1 115 aa7.3□□□□□ -1.24
CDC42EP3-206ENST00000611976 KCNQ1DNQ9H478 68 aa7.3□□□□□ -1.24
CDC42EP3-206ENST00000611976 CFAP47Q6ZTR5 3102 aa7.29□□□□□ -1.24
CDC42EP3-206ENST00000611976 TP53AIP1Q9HCN2 124 aa7.29□□□□□ -1.24
CDC42EP3-206ENST00000611976 ST20-AS1Q8NBB2 130 aa7.28□□□□□ -1.24
CDC42EP3-206ENST00000611976 FLNBO75369 2602 aaKnown RBP7.28□□□□□ -1.24
CDC42EP3-206ENST00000611976 DCHS1Q96JQ0 3298 aa7.28□□□□□ -1.24
CDC42EP3-206ENST00000611976 DNAH10OSP0CZ25 163 aa7.27□□□□□ -1.24
CDC42EP3-206ENST00000611976 CIRBP-AS1Q8TBR5 109 aa7.26□□□□□ -1.25
CDC42EP3-206ENST00000611976 C16orf90A8MZG2 172 aa7.25□□□□□ -1.25
CDC42EP3-206ENST00000611976 ZZEF1O43149 2961 aa7.25□□□□□ -1.25
CDC42EP3-206ENST00000611976 IGLV1-50A0A075B6I6 118 aa7.25□□□□□ -1.25
CDC42EP3-206ENST00000611976 H7BZZ5 65 aa7.25□□□□□ -1.25
CDC42EP3-206ENST00000611976 SERTAD4-AS1Q5TG53 156 aa7.25□□□□□ -1.25
CDC42EP3-206ENST00000611976 C15orf56Q8N910 161 aa7.24□□□□□ -1.25
CDC42EP3-206ENST00000611976 LINC00588Q9Y4M8 146 aa7.24□□□□□ -1.25
CDC42EP3-206ENST00000611976 IGLV5-52A0A0A0MRZ9 124 aa7.24□□□□□ -1.25
CDC42EP3-206ENST00000611976 USP24Q9UPU5 2620 aa7.24□□□□□ -1.25
CDC42EP3-206ENST00000611976 ZFHX4Q86UP3 3567 aa7.23□□□□□ -1.25
CDC42EP3-206ENST00000611976 K7ERS5 55 aa7.22□□□□□ -1.25
CDC42EP3-206ENST00000611976 K7EQZ3 153 aa7.22□□□□□ -1.25
CDC42EP3-206ENST00000611976 TRAV22A0A0B4J277 110 aa7.22□□□□□ -1.25
CDC42EP3-206ENST00000611976 EPM2AB3EWF7 344 aa7.21□□□□□ -1.25
CDC42EP3-206ENST00000611976 IGSF10Q6WRI0 2623 aa7.21□□□□□ -1.25
CDC42EP3-206ENST00000611976 COL12A1Q99715 3063 aa7.21□□□□□ -1.26
CDC42EP3-206ENST00000611976 LY6G6CO95867 125 aa7.21□□□□□ -1.26
CDC42EP3-206ENST00000611976 FAM168BA1KXE4 195 aa7.21□□□□□ -1.26
CDC42EP3-206ENST00000611976 Q8N377 158 aa7.21□□□□□ -1.26
CDC42EP3-206ENST00000611976 PLA2G2DQ9UNK4 145 aa7.21□□□□□ -1.26
CDC42EP3-206ENST00000611976 PHF5AQ7RTV0 110 aaKnown RBP7.2□□□□□ -1.26
CDC42EP3-206ENST00000611976 TLX1NBP0CAT3 122 aa7.2□□□□□ -1.26
CDC42EP3-206ENST00000611976 CFAP46Q8IYW2 2715 aa7.2□□□□□ -1.26
CDC42EP3-206ENST00000611976 RELNP78509 3460 aa7.19□□□□□ -1.26
CDC42EP3-206ENST00000611976 LRBAP50851 2863 aa7.19□□□□□ -1.26
CDC42EP3-206ENST00000611976 A8MWP4 228 aa7.18□□□□□ -1.26
CDC42EP3-206ENST00000611976 KRTAP10-3P60369 221 aa7.18□□□□□ -1.26
CDC42EP3-206ENST00000611976 KRTAP1-3Q8IUG1 177 aa7.18□□□□□ -1.26
CDC42EP3-206ENST00000611976 RPL37AP61513 92 aaKnown RBP7.17□□□□□ -1.26
CDC42EP3-206ENST00000611976 MOBPQ13875 183 aa7.17□□□□□ -1.26
CDC42EP3-206ENST00000611976 KALRNO60229 2985 aa7.17□□□□□ -1.26
CDC42EP3-206ENST00000611976 C1orf134Q5TEV5 83 aa7.16□□□□□ -1.26
CDC42EP3-206ENST00000611976 IGFL1Q6UW32 110 aa7.16□□□□□ -1.26
CDC42EP3-206ENST00000611976 MDFIQ99750 246 aa7.15□□□□□ -1.26
CDC42EP3-206ENST00000611976 KRTAP24-1Q3LI83 254 aa7.15□□□□□ -1.26
CDC42EP3-206ENST00000611976 FLNCQ14315 2725 aa7.15□□□□□ -1.26
CDC42EP3-206ENST00000611976 ACYP2P14621 99 aa7.14□□□□□ -1.27
CDC42EP3-206ENST00000611976 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
CDC42EP3-206ENST00000611976 IGLV5-48A0A075B6I7 105 aa7.12□□□□□ -1.27
CDC42EP3-206ENST00000611976 LINC00336Q6ZUF6 198 aa7.12□□□□□ -1.27
CDC42EP3-206ENST00000611976 NBDYA0A0U1RRE5 68 aa7.12□□□□□ -1.27
CDC42EP3-206ENST00000611976 PRR15Q8IV56 129 aa7.12□□□□□ -1.27
CDC42EP3-206ENST00000611976 FLNAP21333 2647 aaKnown RBP7.11□□□□□ -1.27
CDC42EP3-206ENST00000611976 KRTAP1-1Q07627 177 aa7.11□□□□□ -1.27
CDC42EP3-206ENST00000611976 SPAG11AQ6PDA7 123 aa7.11□□□□□ -1.27
CDC42EP3-206ENST00000611976 HELZ2Q9BYK8 2649 aaKnown RBP7.11□□□□□ -1.27
CDC42EP3-206ENST00000611976 CHTF8P0CG12 524 aa7.11□□□□□ -1.27
CDC42EP3-206ENST00000611976 KRTAP10-11P60412 298 aa7.11□□□□□ -1.27
CDC42EP3-206ENST00000611976 A0A1W2PNM2 257 aa7.11□□□□□ -1.27
CDC42EP3-206ENST00000611976 CYP4F30PQ9H0H9 118 aa7.1□□□□□ -1.27
CDC42EP3-206ENST00000611976 IGLV5-37A0A075B6J1 123 aa7.1□□□□□ -1.27
CDC42EP3-206ENST00000611976 ITPR3Q14573 2671 aa7.09□□□□□ -1.27
CDC42EP3-206ENST00000611976 LOC101927531A0A1B0GV80 90 aa7.09□□□□□ -1.27
CDC42EP3-206ENST00000611976 A0A1B0GU69 56 aa7.08□□□□□ -1.28
CDC42EP3-206ENST00000611976 A8MUN3 132 aa7.08□□□□□ -1.28
CDC42EP3-206ENST00000611976 COA5Q86WW8 74 aa7.08□□□□□ -1.28
CDC42EP3-206ENST00000611976 TACC2O95359 2948 aa7.08□□□□□ -1.28
CDC42EP3-206ENST00000611976 CHD6Q8TD26 2715 aa7.08□□□□□ -1.28
CDC42EP3-206ENST00000611976 OCR1Q9BZK8 76 aa7.08□□□□□ -1.28
CDC42EP3-206ENST00000611976 MRPL34Q9BQ48 92 aaKnown RBP7.07□□□□□ -1.28
CDC42EP3-206ENST00000611976 RTL8CO15255 209 aa7.07□□□□□ -1.28
CDC42EP3-206ENST00000611976 F8P00451 2351 aa7.05□□□□□ -1.28
CDC42EP3-206ENST00000611976 IGKV2D-30A0A075B6S6 120 aa7.05□□□□□ -1.28
CDC42EP3-206ENST00000611976 IGKV2-30P06310 120 aa7.05□□□□□ -1.28
CDC42EP3-206ENST00000611976 C8orf87E5RJ46 101 aa7.05□□□□□ -1.28
CDC42EP3-206ENST00000611976 WIPF1O43516 503 aa7.04□□□□□ -1.28
CDC42EP3-206ENST00000611976 SPINK1P00995 79 aa7.04□□□□□ -1.28
CDC42EP3-206ENST00000611976 C7orf65Q6ZTY9 151 aa7.04□□□□□ -1.28
CDC42EP3-206ENST00000611976 SPANXA2-OT1Q8N9U9 137 aa7.04□□□□□ -1.28
CDC42EP3-206ENST00000611976 C8orf17Q9NRJ1 99 aa7.04□□□□□ -1.28
CDC42EP3-206ENST00000611976 LINC00313P59037 77 aa7.03□□□□□ -1.28
CDC42EP3-206ENST00000611976 SPRR4Q96PI1 79 aa7.02□□□□□ -1.29
CDC42EP3-206ENST00000611976 UTP20O75691 2785 aaKnown RBP7.02□□□□□ -1.29
CDC42EP3-206ENST00000611976 CNBPP62633 177 aaKnown RBP7.02□□□□□ -1.29
CDC42EP3-206ENST00000611976 Q8NDZ9 215 aa7.02□□□□□ -1.29
CDC42EP3-206ENST00000611976 A0A0G2JQZ4 141 aa7.02□□□□□ -1.29
CDC42EP3-206ENST00000611976 A0A1W2PNN7 141 aa7.02□□□□□ -1.29
CDC42EP3-206ENST00000611976 A0A1B0GVX0 72 aa7.01□□□□□ -1.29
CDC42EP3-206ENST00000611976 FAM229AH3BQW9 127 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms