RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 CELSR1Q9NYQ6 3014 aa4.24□□□□□ -1.73
SNX13-213ENST00000611725 A0A096LNI7 61 aa4.24□□□□□ -1.73
SNX13-213ENST00000611725 LINC00528Q8N1L1 170 aa4.24□□□□□ -1.73
SNX13-213ENST00000611725 CR1P17927 2039 aa4.24□□□□□ -1.73
SNX13-213ENST00000611725 DNAH10OSP0CZ25 163 aa4.24□□□□□ -1.73
SNX13-213ENST00000611725 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
SNX13-213ENST00000611725 LOC110117498A0A087WWA1 95 aa4.23□□□□□ -1.73
SNX13-213ENST00000611725 C15orf56Q8N910 161 aa4.23□□□□□ -1.73
SNX13-213ENST00000611725 LINC00167Q96N53 147 aa4.23□□□□□ -1.73
SNX13-213ENST00000611725 MRPL55Q7Z7F7 128 aaKnown RBP4.22□□□□□ -1.73
SNX13-213ENST00000611725 BCE1O60756 84 aa4.22□□□□□ -1.73
SNX13-213ENST00000611725 Q8NDZ9 215 aa4.22□□□□□ -1.73
SNX13-213ENST00000611725 PRYO14603 147 aa4.21□□□□□ -1.73
SNX13-213ENST00000611725 TRAV7A0A075B6U4 112 aa4.21□□□□□ -1.74
SNX13-213ENST00000611725 FAM236DA0A1B0GTK5 79 aa4.21□□□□□ -1.74
SNX13-213ENST00000611725 FAM236CP0DP71 79 aa4.21□□□□□ -1.74
SNX13-213ENST00000611725 Q6ZRX8 168 aa4.21□□□□□ -1.74
SNX13-213ENST00000611725 PDZD2O15018 2839 aa4.21□□□□□ -1.74
SNX13-213ENST00000611725 KCNQ1DNQ9H478 68 aa4.2□□□□□ -1.74
SNX13-213ENST00000611725 TRBV7-4A0A0J9YYF1 115 aa4.2□□□□□ -1.74
SNX13-213ENST00000611725 CXCL6P80162 114 aa4.2□□□□□ -1.74
SNX13-213ENST00000611725 FBN1P35555 2871 aaKnown RBP4.2□□□□□ -1.74
SNX13-213ENST00000611725 REG3GQ6UW15 175 aa4.2□□□□□ -1.74
SNX13-213ENST00000611725 SNURFQ9Y675 71 aa4.2□□□□□ -1.74
SNX13-213ENST00000611725 SERTAD4-AS1Q5TG53 156 aa4.2□□□□□ -1.74
SNX13-213ENST00000611725 Q8N9L7 120 aa4.2□□□□□ -1.74
SNX13-213ENST00000611725 B9D2Q9BPU9 175 aa4.2□□□□□ -1.74
SNX13-213ENST00000611725 K7EIL1 84 aa4.19□□□□□ -1.74
SNX13-213ENST00000611725 MP68P56378 58 aa4.19□□□□□ -1.74
SNX13-213ENST00000611725 NDUFB1O75438 58 aa4.19□□□□□ -1.74
SNX13-213ENST00000611725 PRLHP81277 87 aa4.19□□□□□ -1.74
SNX13-213ENST00000611725 SMG1Q96Q15 3661 aaKnown RBP4.18□□□□□ -1.74
SNX13-213ENST00000611725 A0A087WSZ3 146 aa4.18□□□□□ -1.74
SNX13-213ENST00000611725 CDK2AP2O75956 126 aa4.18□□□□□ -1.74
SNX13-213ENST00000611725 Q8NBF4 154 aa4.18□□□□□ -1.74
SNX13-213ENST00000611725 TMEM254Q8TBM7 123 aa4.17□□□□□ -1.74
SNX13-213ENST00000611725 M0R2N4 97 aa4.17□□□□□ -1.74
SNX13-213ENST00000611725 CASC10Q5T4H9 136 aa4.17□□□□□ -1.74
SNX13-213ENST00000611725 WFDC13Q8IUB5 93 aa4.17□□□□□ -1.74
SNX13-213ENST00000611725 A0A1B0GW54 56 aa4.17□□□□□ -1.74
SNX13-213ENST00000611725 NDUFC1O43677 76 aa4.17□□□□□ -1.74
SNX13-213ENST00000611725 ST20-AS1Q8NBB2 130 aa4.17□□□□□ -1.74
SNX13-213ENST00000611725 TM2D3Q9BRN9 247 aa4.17□□□□□ -1.74
SNX13-213ENST00000611725 LINC00474Q9P2X8 69 aa4.17□□□□□ -1.74
SNX13-213ENST00000611725 IGLV1-50A0A075B6I6 118 aa4.16□□□□□ -1.74
SNX13-213ENST00000611725 NUPR2A6NF83 97 aa4.16□□□□□ -1.74
SNX13-213ENST00000611725 FAM168BA1KXE4 195 aa4.16□□□□□ -1.74
SNX13-213ENST00000611725 TLX1NBP0CAT3 122 aa4.15□□□□□ -1.74
SNX13-213ENST00000611725 H0Y9J4 135 aa4.15□□□□□ -1.74
SNX13-213ENST00000611725 Q9BRP9 147 aa4.15□□□□□ -1.75
SNX13-213ENST00000611725 KLKP1Q107X0 134 aa4.14□□□□□ -1.75
SNX13-213ENST00000611725 KRTAP26-1Q6PEX3 210 aa4.14□□□□□ -1.75
SNX13-213ENST00000611725 Q8N377 158 aa4.14□□□□□ -1.75
SNX13-213ENST00000611725 C16orf90A8MZG2 172 aa4.14□□□□□ -1.75
SNX13-213ENST00000611725 MDFIQ99750 246 aa4.13□□□□□ -1.75
SNX13-213ENST00000611725 NBDYA0A0U1RRE5 68 aa4.12□□□□□ -1.75
SNX13-213ENST00000611725 CHTF8P0CG12 524 aa4.12□□□□□ -1.75
SNX13-213ENST00000611725 IGLV5-48A0A075B6I7 105 aa4.12□□□□□ -1.75
SNX13-213ENST00000611725 LINC00476Q8WZB0 136 aa4.12□□□□□ -1.75
SNX13-213ENST00000611725 PLA2G2DQ9UNK4 145 aa4.12□□□□□ -1.75
SNX13-213ENST00000611725 DEFB116Q30KQ4 102 aa4.12□□□□□ -1.75
SNX13-213ENST00000611725 A0A1W2PNM2 257 aa4.11□□□□□ -1.75
SNX13-213ENST00000611725 TENM2Q9NT68 2774 aa4.11□□□□□ -1.75
SNX13-213ENST00000611725 ATP5EP56381 51 aaPredicted RBP4.11□□□□□ -1.75
SNX13-213ENST00000611725 ERC2-IT1O76042 136 aa4.11□□□□□ -1.75
SNX13-213ENST00000611725 PRR4Q16378 134 aa4.11□□□□□ -1.75
SNX13-213ENST00000611725 C5orf47Q569G3 176 aa4.11□□□□□ -1.75
SNX13-213ENST00000611725 NDUFS5O43920 106 aa4.11□□□□□ -1.75
SNX13-213ENST00000611725 C9orf163Q8N9P6 203 aa4.11□□□□□ -1.75
SNX13-213ENST00000611725 PKD1L1Q8TDX9 2849 aa4.1□□□□□ -1.75
SNX13-213ENST00000611725 EPM2AB3EWF7 344 aa4.1□□□□□ -1.75
SNX13-213ENST00000611725 IGLV5-37A0A075B6J1 123 aa4.1□□□□□ -1.75
SNX13-213ENST00000611725 SMIM26A0A096LP01 95 aa4.1□□□□□ -1.75
SNX13-213ENST00000611725 PHF5AQ7RTV0 110 aaKnown RBP4.1□□□□□ -1.75
SNX13-213ENST00000611725 FAM30AQ9NZY2 134 aa4.1□□□□□ -1.75
SNX13-213ENST00000611725 IGLV9-49A0A0B4J1Y8 123 aa4.1□□□□□ -1.75
SNX13-213ENST00000611725 ZNF706Q9Y5V0 76 aaPredicted RBP4.1□□□□□ -1.75
SNX13-213ENST00000611725 SERP1Q9Y6X1 66 aa4.1□□□□□ -1.75
SNX13-213ENST00000611725 SMIM29Q86T20 159 aa4.09□□□□□ -1.75
SNX13-213ENST00000611725 CNBPP62633 177 aaKnown RBP4.09□□□□□ -1.75
SNX13-213ENST00000611725 H7BZZ5 65 aa4.09□□□□□ -1.75
SNX13-213ENST00000611725 HCG22E2RYF7 251 aa4.09□□□□□ -1.75
SNX13-213ENST00000611725 LINC00208Q96KT6 92 aa4.09□□□□□ -1.75
SNX13-213ENST00000611725 CYSTM1Q9H1C7 97 aa4.09□□□□□ -1.75
SNX13-213ENST00000611725 SPRR1AP35321 89 aa4.09□□□□□ -1.76
SNX13-213ENST00000611725 HRCT1Q6UXD1 115 aa4.08□□□□□ -1.76
SNX13-213ENST00000611725 SVEP1Q4LDE5 3571 aa4.08□□□□□ -1.76
SNX13-213ENST00000611725 LY6G6CO95867 125 aa4.08□□□□□ -1.76
SNX13-213ENST00000611725 CASC2Q6XLA1 102 aa4.08□□□□□ -1.76
SNX13-213ENST00000611725 APLNQ9ULZ1 77 aa4.08□□□□□ -1.76
SNX13-213ENST00000611725 A0A1W2PNN7 141 aa4.07□□□□□ -1.76
SNX13-213ENST00000611725 A0A0G2JQZ4 141 aa4.07□□□□□ -1.76
SNX13-213ENST00000611725 IGFL1Q6UW32 110 aa4.07□□□□□ -1.76
SNX13-213ENST00000611725 SPINK6Q6UWN8 80 aa4.07□□□□□ -1.76
SNX13-213ENST00000611725 IGKV4-1P06312 121 aa4.07□□□□□ -1.76
SNX13-213ENST00000611725 KRTAP1-5Q9BYS1 174 aa4.07□□□□□ -1.76
SNX13-213ENST00000611725 K7EQZ3 153 aa4.07□□□□□ -1.76
SNX13-213ENST00000611725 C1orf134Q5TEV5 83 aa4.05□□□□□ -1.76
SNX13-213ENST00000611725 MPLKIPQ8TAP9 179 aa4.05□□□□□ -1.76
SNX13-213ENST00000611725 IGLV5-52A0A0A0MRZ9 124 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms