RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 NAA38Q9BRA0 125 aaKnown RBP13.49□□□□□ -0.25
CBWD3-207ENST00000611426 RPL13AP40429 203 aaKnown RBP13.48□□□□□ -0.25
CBWD3-207ENST00000611426 VAMP3Q15836 100 aa13.48□□□□□ -0.25
CBWD3-207ENST00000611426 LYRM7Q5U5X0 104 aa13.48□□□□□ -0.25
CBWD3-207ENST00000611426 SPINK6Q6UWN8 80 aa13.48□□□□□ -0.25
CBWD3-207ENST00000611426 LINC00337Q8N6G1 96 aa13.48□□□□□ -0.25
CBWD3-207ENST00000611426 TRBV10-2A0A0K0K1G8 114 aa13.45□□□□□ -0.26
CBWD3-207ENST00000611426 K7EP34 96 aa13.45□□□□□ -0.26
CBWD3-207ENST00000611426 REG3GQ6UW15 175 aa13.45□□□□□ -0.26
CBWD3-207ENST00000611426 A0A1W2PNN7 141 aa13.45□□□□□ -0.26
CBWD3-207ENST00000611426 UBE2V1Q13404 147 aa13.45□□□□□ -0.26
CBWD3-207ENST00000611426 RPL18AQ02543 176 aaKnown RBP13.44□□□□□ -0.26
CBWD3-207ENST00000611426 GTF2H5Q6ZYL4 71 aa13.44□□□□□ -0.26
CBWD3-207ENST00000611426 Q8NDZ9 215 aa13.43□□□□□ -0.26
CBWD3-207ENST00000611426 SPCS1Q9Y6A9 102 aa13.43□□□□□ -0.26
CBWD3-207ENST00000611426 Q1RN00 199 aa13.42□□□□□ -0.26
CBWD3-207ENST00000611426 TRBV20-1A0A075B6N2 111 aa13.41□□□□□ -0.26
CBWD3-207ENST00000611426 GAGE10A6NGK3 116 aa13.41□□□□□ -0.26
CBWD3-207ENST00000611426 TRIAP1O43715 76 aa13.41□□□□□ -0.26
CBWD3-207ENST00000611426 XAGE1AQ9HD64 81 aa13.41□□□□□ -0.26
CBWD3-207ENST00000611426 H7C2G1 150 aa13.4□□□□□ -0.26
CBWD3-207ENST00000611426 RPL28P46779 137 aaKnown RBP13.4□□□□□ -0.26
CBWD3-207ENST00000611426 VPREB1P12018 145 aa13.39□□□□□ -0.27
CBWD3-207ENST00000611426 COX6CP09669 75 aa13.38□□□□□ -0.27
CBWD3-207ENST00000611426 PSMB2P49721 201 aa13.38□□□□□ -0.27
CBWD3-207ENST00000611426 KRTAP10-8P60410 259 aa13.38□□□□□ -0.27
CBWD3-207ENST00000611426 C9orf129Q5T035 196 aaKnown RBP13.38□□□□□ -0.27
CBWD3-207ENST00000611426 TMEM126AQ9H061 195 aa13.38□□□□□ -0.27
CBWD3-207ENST00000611426 PSORS1C2Q9UIG4 136 aa13.37□□□□□ -0.27
CBWD3-207ENST00000611426 GAGE2EQ4V326 116 aa13.36□□□□□ -0.27
CBWD3-207ENST00000611426 PHF5AQ7RTV0 110 aaKnown RBP13.36□□□□□ -0.27
CBWD3-207ENST00000611426 GAGE2DQ9UEU5 116 aa13.36□□□□□ -0.27
CBWD3-207ENST00000611426 IGLV5-37A0A075B6J1 123 aa13.35□□□□□ -0.27
CBWD3-207ENST00000611426 IGLV6-57P01721 117 aa13.35□□□□□ -0.27
CBWD3-207ENST00000611426 LRP2P98164 4655 aa13.35□□□□□ -0.27
CBWD3-207ENST00000611426 SCGB1C2P0DMR2 95 aa13.33□□□□□ -0.27
CBWD3-207ENST00000611426 SMIM11BQ8TCY0 68 aa13.33□□□□□ -0.27
CBWD3-207ENST00000611426 M0R378 163 aa13.32□□□□□ -0.28
CBWD3-207ENST00000611426 TCL1BO95988 128 aa13.32□□□□□ -0.28
CBWD3-207ENST00000611426 C1orf137Q5JT78 98 aa13.32□□□□□ -0.28
CBWD3-207ENST00000611426 OR13C6PQ8NH95 151 aa13.32□□□□□ -0.28
CBWD3-207ENST00000611426 NCR3O14931 201 aa13.32□□□□□ -0.28
CBWD3-207ENST00000611426 FAM168BA1KXE4 195 aa13.29□□□□□ -0.28
CBWD3-207ENST00000611426 S100A7L2Q5SY68 101 aa13.29□□□□□ -0.28
CBWD3-207ENST00000611426 CBY1Q9Y3M2 126 aa13.29□□□□□ -0.28
CBWD3-207ENST00000611426 H0YGX0 51 aa13.28□□□□□ -0.28
CBWD3-207ENST00000611426 LST1O00453 97 aa13.28□□□□□ -0.28
CBWD3-207ENST00000611426 ATXN8Q156A1 80 aa13.28□□□□□ -0.28
CBWD3-207ENST00000611426 H3BMG7 143 aa13.27□□□□□ -0.29
CBWD3-207ENST00000611426 FAM19A5Q7Z5A7 132 aaPredicted RBP13.26□□□□□ -0.29
CBWD3-207ENST00000611426 RNF213Q63HN8 5207 aa13.26□□□□□ -0.29
CBWD3-207ENST00000611426 TRBV10-3A0A0K0K1G6 114 aa13.25□□□□□ -0.29
CBWD3-207ENST00000611426 PRO0461Q9UI25 63 aa13.25□□□□□ -0.29
CBWD3-207ENST00000611426 IGLV7-43P04211 117 aa13.24□□□□□ -0.29
CBWD3-207ENST00000611426 NKAPP1Q8N9T2 125 aa13.24□□□□□ -0.29
CBWD3-207ENST00000611426 F8W1H4 67 aa13.23□□□□□ -0.29
CBWD3-207ENST00000611426 KRTAP7-1Q8IUC3 87 aa13.23□□□□□ -0.29
CBWD3-207ENST00000611426 TRACP01848 142 aa13.22□□□□□ -0.29
CBWD3-207ENST00000611426 CLEC2BQ92478 149 aa13.22□□□□□ -0.29
CBWD3-207ENST00000611426 DIRC1Q969H9 104 aa13.22□□□□□ -0.29
CBWD3-207ENST00000611426 TRBV7-6A0A0J9YX20 115 aa13.21□□□□□ -0.29
CBWD3-207ENST00000611426 KRTAP11-1Q8IUC1 163 aa13.21□□□□□ -0.29
CBWD3-207ENST00000611426 TRAV23DV6A0A075B6W5 121 aa13.2□□□□□ -0.3
CBWD3-207ENST00000611426 M0QXV9 152 aa13.2□□□□□ -0.3
CBWD3-207ENST00000611426 A0A1B0GX51 115 aa13.2□□□□□ -0.3
CBWD3-207ENST00000611426 KCNQ1DNQ9H478 68 aa13.2□□□□□ -0.3
CBWD3-207ENST00000611426 UBE2BP63146 152 aa13.19□□□□□ -0.3
CBWD3-207ENST00000611426 C6orf99Q4VX62 202 aa13.18□□□□□ -0.3
CBWD3-207ENST00000611426 FAM218AQ96MZ4 157 aa13.18□□□□□ -0.3
CBWD3-207ENST00000611426 C22orf24Q9Y442 160 aa13.18□□□□□ -0.3
CBWD3-207ENST00000611426 ZNF73O43830 326 aaPredicted RBP13.17□□□□□ -0.3
CBWD3-207ENST00000611426 H0Y9J4 135 aa13.16□□□□□ -0.3
CBWD3-207ENST00000611426 MRPL55Q7Z7F7 128 aaKnown RBP13.16□□□□□ -0.3
CBWD3-207ENST00000611426 IGLV1-50A0A075B6I6 118 aa13.15□□□□□ -0.3
CBWD3-207ENST00000611426 PRR26Q8N8Z3 221 aa13.15□□□□□ -0.3
CBWD3-207ENST00000611426 C9JAW5 83 aa13.14□□□□□ -0.31
CBWD3-207ENST00000611426 PRYO14603 147 aa13.14□□□□□ -0.31
CBWD3-207ENST00000611426 SMCPP49901 116 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-207ENST00000611426 LINC00167Q96N53 147 aa13.13□□□□□ -0.31
CBWD3-207ENST00000611426 H3BT86 120 aa13.12□□□□□ -0.31
CBWD3-207ENST00000611426 SLC25A20O43772 301 aa13.12□□□□□ -0.31
CBWD3-207ENST00000611426 SPRR1AP35321 89 aa13.12□□□□□ -0.31
CBWD3-207ENST00000611426 ELOF1P60002 83 aaKnown RBP13.11□□□□□ -0.31
CBWD3-207ENST00000611426 LINC00575Q6W349 94 aa13.1□□□□□ -0.31
CBWD3-207ENST00000611426 KRTAP4-16G5E9R7 235 aaPredicted RBP13.08□□□□□ -0.31
CBWD3-207ENST00000611426 ANKRD29Q8N6D5 301 aa13.08□□□□□ -0.31
CBWD3-207ENST00000611426 COX7BP24311 80 aa13.07□□□□□ -0.32
CBWD3-207ENST00000611426 MTURNQ8N3F0 131 aa13.07□□□□□ -0.32
CBWD3-207ENST00000611426 SNCGO76070 127 aa13.07□□□□□ -0.32
CBWD3-207ENST00000611426 DNAL4O96015 105 aa13.06□□□□□ -0.32
CBWD3-207ENST00000611426 KRTAP1-4P0C5Y4 121 aa13.06□□□□□ -0.32
CBWD3-207ENST00000611426 LPAP08519 4548 aa13.04□□□□□ -0.32
CBWD3-207ENST00000611426 RPL37AP8A6NKH3 93 aa13.03□□□□□ -0.32
CBWD3-207ENST00000611426 TEN1Q86WV5 123 aa13.03□□□□□ -0.32
CBWD3-207ENST00000611426 hADV29S1A0JD25 119 aa13.02□□□□□ -0.33
CBWD3-207ENST00000611426 ZNF861PO60384 105 aa13.02□□□□□ -0.33
CBWD3-207ENST00000611426 ETDBQ3ZM63 59 aa13.01□□□□□ -0.33
CBWD3-207ENST00000611426 BAALC-AS2P0C853 105 aa13□□□□□ -0.33
CBWD3-207ENST00000611426 Q6ZRX8 168 aa13□□□□□ -0.33
CBWD3-207ENST00000611426 B5MCH6 92 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms