RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 KIAA0087Q14695 138 aa4.86□□□□□ -1.63
CSDE1-218ENST00000610726 Q6JHZ5 121 aa4.86□□□□□ -1.63
CSDE1-218ENST00000610726 PHF5AQ7RTV0 110 aaKnown RBP4.86□□□□□ -1.63
CSDE1-218ENST00000610726 TM2D3Q9BRN9 247 aa4.86□□□□□ -1.63
CSDE1-218ENST00000610726 DCHS2Q6V1P9 2916 aa4.86□□□□□ -1.63
CSDE1-218ENST00000610726 FBN2P35556 2912 aa4.86□□□□□ -1.63
CSDE1-218ENST00000610726 FAM168BA1KXE4 195 aa4.85□□□□□ -1.63
CSDE1-218ENST00000610726 FAM19A3Q7Z5A8 133 aa4.85□□□□□ -1.63
CSDE1-218ENST00000610726 SNURFQ9Y675 71 aa4.85□□□□□ -1.63
CSDE1-218ENST00000610726 KMT2BQ9UMN6 2715 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-218ENST00000610726 VPREB1P12018 145 aa4.84□□□□□ -1.63
CSDE1-218ENST00000610726 SERP2Q8N6R1 65 aa4.84□□□□□ -1.63
CSDE1-218ENST00000610726 WWC2-AS2Q96NR7 200 aa4.84□□□□□ -1.63
CSDE1-218ENST00000610726 Q6ZVQ6 151 aa4.84□□□□□ -1.64
CSDE1-218ENST00000610726 C15orf56Q8N910 161 aa4.84□□□□□ -1.64
CSDE1-218ENST00000610726 CDIP1Q9H305 208 aa4.83□□□□□ -1.64
CSDE1-218ENST00000610726 C16orf90A8MZG2 172 aa4.83□□□□□ -1.64
CSDE1-218ENST00000610726 RTL8CO15255 209 aa4.83□□□□□ -1.64
CSDE1-218ENST00000610726 ELOF1P60002 83 aaKnown RBP4.83□□□□□ -1.64
CSDE1-218ENST00000610726 STAB2Q8WWQ8 2551 aa4.83□□□□□ -1.64
CSDE1-218ENST00000610726 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
CSDE1-218ENST00000610726 TMEM258P61165 79 aa4.83□□□□□ -1.64
CSDE1-218ENST00000610726 SERTAD4-AS1Q5TG53 156 aa4.83□□□□□ -1.64
CSDE1-218ENST00000610726 FAM30AQ9NZY2 134 aa4.83□□□□□ -1.64
CSDE1-218ENST00000610726 CHKB-CPT1BH3BT56 60 aa4.82□□□□□ -1.64
CSDE1-218ENST00000610726 Q8N9L7 120 aa4.82□□□□□ -1.64
CSDE1-218ENST00000610726 ST20-AS1Q8NBB2 130 aa4.82□□□□□ -1.64
CSDE1-218ENST00000610726 PRR4Q16378 134 aa4.82□□□□□ -1.64
CSDE1-218ENST00000610726 CASC10Q5T4H9 136 aa4.82□□□□□ -1.64
CSDE1-218ENST00000610726 Q6ZRX8 168 aa4.82□□□□□ -1.64
CSDE1-218ENST00000610726 TENM4Q6N022 2769 aa4.82□□□□□ -1.64
CSDE1-218ENST00000610726 COX7CP15954 63 aa4.81□□□□□ -1.64
CSDE1-218ENST00000610726 Q6Q795 121 aa4.81□□□□□ -1.64
CSDE1-218ENST00000610726 IGLV6-57P01721 117 aa4.81□□□□□ -1.64
CSDE1-218ENST00000610726 LINC01547P58512 204 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-218ENST00000610726 IGHV6-1A0A0B4J1U7 121 aa4.8□□□□□ -1.64
CSDE1-218ENST00000610726 EPM2AB3EWF7 344 aa4.8□□□□□ -1.64
CSDE1-218ENST00000610726 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
CSDE1-218ENST00000610726 WIPF1O43516 503 aa4.8□□□□□ -1.64
CSDE1-218ENST00000610726 FAM104AQ969W3 186 aa4.79□□□□□ -1.64
CSDE1-218ENST00000610726 J3KT08 172 aa4.79□□□□□ -1.64
CSDE1-218ENST00000610726 TRBV7-6A0A0J9YX20 115 aa4.79□□□□□ -1.64
CSDE1-218ENST00000610726 MOBPQ13875 183 aa4.78□□□□□ -1.64
CSDE1-218ENST00000610726 FAM236DA0A1B0GTK5 79 aa4.78□□□□□ -1.64
CSDE1-218ENST00000610726 FAM236CP0DP71 79 aa4.78□□□□□ -1.64
CSDE1-218ENST00000610726 ZFHX4Q86UP3 3567 aa4.78□□□□□ -1.64
CSDE1-218ENST00000610726 C9orf129Q5T035 196 aaKnown RBP4.78□□□□□ -1.64
CSDE1-218ENST00000610726 APLNQ9ULZ1 77 aa4.78□□□□□ -1.64
CSDE1-218ENST00000610726 LINC00476Q8WZB0 136 aa4.77□□□□□ -1.65
CSDE1-218ENST00000610726 LINC00208Q96KT6 92 aa4.77□□□□□ -1.65
CSDE1-218ENST00000610726 IGLV1-50A0A075B6I6 118 aa4.76□□□□□ -1.65
CSDE1-218ENST00000610726 CASC2Q6XLA1 102 aa4.76□□□□□ -1.65
CSDE1-218ENST00000610726 MXRA5Q9NR99 2828 aa4.76□□□□□ -1.65
CSDE1-218ENST00000610726 TRAV7A0A075B6U4 112 aa4.76□□□□□ -1.65
CSDE1-218ENST00000610726 Q6ZQT0 140 aa4.76□□□□□ -1.65
CSDE1-218ENST00000610726 KCNQ1DNQ9H478 68 aa4.76□□□□□ -1.65
CSDE1-218ENST00000610726 LINC00528Q8N1L1 170 aa4.75□□□□□ -1.65
CSDE1-218ENST00000610726 A0A087WTM6 91 aa4.75□□□□□ -1.65
CSDE1-218ENST00000610726 C9orf163Q8N9P6 203 aa4.75□□□□□ -1.65
CSDE1-218ENST00000610726 Q8NBF4 154 aa4.75□□□□□ -1.65
CSDE1-218ENST00000610726 BCE1O60756 84 aa4.74□□□□□ -1.65
CSDE1-218ENST00000610726 MPLKIPQ8TAP9 179 aa4.74□□□□□ -1.65
CSDE1-218ENST00000610726 RETNLBQ9BQ08 111 aa4.74□□□□□ -1.65
CSDE1-218ENST00000610726 TRBV7-7A0A0K0K1E9 115 aa4.74□□□□□ -1.65
CSDE1-218ENST00000610726 SPACA4Q8TDM5 124 aa4.73□□□□□ -1.65
CSDE1-218ENST00000610726 A0A1W2PNN7 141 aa4.73□□□□□ -1.65
CSDE1-218ENST00000610726 CXCL6P80162 114 aa4.73□□□□□ -1.65
CSDE1-218ENST00000610726 NDUFC1O43677 76 aa4.73□□□□□ -1.65
CSDE1-218ENST00000610726 HCG22E2RYF7 251 aa4.72□□□□□ -1.65
CSDE1-218ENST00000610726 LOC110117498A0A087WWA1 95 aa4.72□□□□□ -1.65
CSDE1-218ENST00000610726 A0A0G2JQZ4 141 aa4.72□□□□□ -1.65
CSDE1-218ENST00000610726 TLX1NBP0CAT3 122 aa4.71□□□□□ -1.65
CSDE1-218ENST00000610726 PCOTHQ58A44 107 aa4.71□□□□□ -1.66
CSDE1-218ENST00000610726 SMIM29Q86T20 159 aa4.71□□□□□ -1.66
CSDE1-218ENST00000610726 CRYGAP11844 174 aa4.7□□□□□ -1.66
CSDE1-218ENST00000610726 TMEM254Q8TBM7 123 aa4.7□□□□□ -1.66
CSDE1-218ENST00000610726 Q8N377 158 aa4.7□□□□□ -1.66
CSDE1-218ENST00000610726 RPL37AP61513 92 aaKnown RBP4.7□□□□□ -1.66
CSDE1-218ENST00000610726 ERC2-IT1O76042 136 aa4.69□□□□□ -1.66
CSDE1-218ENST00000610726 ANAPC11Q9NYG5 84 aa4.69□□□□□ -1.66
CSDE1-218ENST00000610726 H0Y9P7 68 aa4.68□□□□□ -1.66
CSDE1-218ENST00000610726 CNBPP62633 177 aaKnown RBP4.68□□□□□ -1.66
CSDE1-218ENST00000610726 LIMD2Q9BT23 127 aa4.68□□□□□ -1.66
CSDE1-218ENST00000610726 SMR3BP02814 79 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-218ENST00000610726 TYMSOSQ8TAI1 123 aa4.68□□□□□ -1.66
CSDE1-218ENST00000610726 PLA2G1BP04054 148 aaKnown RBP4.67□□□□□ -1.66
CSDE1-218ENST00000610726 PLA2G2DQ9UNK4 145 aa4.67□□□□□ -1.66
CSDE1-218ENST00000610726 SMG1Q96Q15 3661 aaKnown RBP4.67□□□□□ -1.66
CSDE1-218ENST00000610726 FAM229AH3BQW9 127 aa4.67□□□□□ -1.66
CSDE1-218ENST00000610726 TNP2Q05952 138 aa4.67□□□□□ -1.66
CSDE1-218ENST00000610726 IGFL1Q6UW32 110 aa4.67□□□□□ -1.66
CSDE1-218ENST00000610726 TRBV7-4A0A0J9YYF1 115 aa4.66□□□□□ -1.66
CSDE1-218ENST00000610726 A0A1B0GW54 56 aa4.66□□□□□ -1.66
CSDE1-218ENST00000610726 SEC61GP60059 68 aa4.66□□□□□ -1.66
CSDE1-218ENST00000610726 ZNF861PO60384 105 aa4.66□□□□□ -1.66
CSDE1-218ENST00000610726 PSORS1C2Q9UIG4 136 aa4.66□□□□□ -1.66
CSDE1-218ENST00000610726 hDV103S1A0JD37 113 aa4.66□□□□□ -1.66
CSDE1-218ENST00000610726 BRK1Q8WUW1 75 aa4.65□□□□□ -1.66
CSDE1-218ENST00000610726 ATP5EP56381 51 aaPredicted RBP4.65□□□□□ -1.66
CSDE1-218ENST00000610726 Q8NDZ9 215 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms