RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 SPTY2D1-AS1A0A0U1RR47 76 aa1.93□□□□□ -2.1
LINC00343-211ENST00000608426 F5P12259 2224 aa1.93□□□□□ -2.1
LINC00343-211ENST00000608426 ANGP03950 147 aaKnown RBP1.92□□□□□ -2.1
LINC00343-211ENST00000608426 LINC00158P58513 81 aa1.92□□□□□ -2.1
LINC00343-211ENST00000608426 RTTNQ86VV8 2226 aa1.91□□□□□ -2.1
LINC00343-211ENST00000608426 TFF3Q07654 80 aa1.91□□□□□ -2.1
LINC00343-211ENST00000608426 SMIM2Q9BVW6 85 aa1.91□□□□□ -2.1
LINC00343-211ENST00000608426 FN1P02751 2386 aaKnown RBP1.91□□□□□ -2.1
LINC00343-211ENST00000608426 LINC00308Q8TCZ7 52 aa1.9□□□□□ -2.11
LINC00343-211ENST00000608426 CDKN2A-AS1Q9UH64 79 aa1.9□□□□□ -2.11
LINC00343-211ENST00000608426 BPTFQ12830 3046 aa1.9□□□□□ -2.11
LINC00343-211ENST00000608426 TNRC6CQ9HCJ0 1690 aaKnown RBP1.9□□□□□ -2.11
LINC00343-211ENST00000608426 IAPPP10997 89 aa1.89□□□□□ -2.11
LINC00343-211ENST00000608426 Q8IZM0 81 aa1.89□□□□□ -2.11
LINC00343-211ENST00000608426 FCGBPQ9Y6R7 5405 aaPredicted RBP1.89□□□□□ -2.11
LINC00343-211ENST00000608426 SPINK13Q1W4C9 94 aa1.88□□□□□ -2.11
LINC00343-211ENST00000608426 CNFNQ9BYD5 112 aa1.88□□□□□ -2.11
LINC00343-211ENST00000608426 FBN3Q75N90 2809 aa1.88□□□□□ -2.11
LINC00343-211ENST00000608426 NDUFA1O15239 70 aa1.87□□□□□ -2.11
LINC00343-211ENST00000608426 TECTAO75443 2155 aa1.87□□□□□ -2.11
LINC00343-211ENST00000608426 GOLGA4Q13439 2230 aaKnown RBP1.87□□□□□ -2.11
LINC00343-211ENST00000608426 ICE1Q9Y2F5 2266 aa1.87□□□□□ -2.11
LINC00343-211ENST00000608426 ABCA1O95477 2261 aa1.86□□□□□ -2.11
LINC00343-211ENST00000608426 KRTAP21-3Q3LHN1 58 aa1.86□□□□□ -2.11
LINC00343-211ENST00000608426 PRO3102Q9H379 93 aa1.86□□□□□ -2.11
LINC00343-211ENST00000608426 LOC730098B7Z3J9 87 aa1.85□□□□□ -2.11
LINC00343-211ENST00000608426 CRIPTQ9P021 101 aa1.85□□□□□ -2.11
LINC00343-211ENST00000608426 CADP27708 2225 aa1.85□□□□□ -2.11
LINC00343-211ENST00000608426 RPL37P61927 97 aaKnown RBP1.84□□□□□ -2.11
LINC00343-211ENST00000608426 PRB3Q04118 309 aaPredicted RBP1.84□□□□□ -2.11
LINC00343-211ENST00000608426 UNQ6190/PRO20217Q6UXQ8 127 aa1.84□□□□□ -2.11
LINC00343-211ENST00000608426 LINC00575Q6W349 94 aa1.84□□□□□ -2.11
LINC00343-211ENST00000608426 UBE2DNLQ8IWF7 75 aa1.84□□□□□ -2.11
LINC00343-211ENST00000608426 ARHGAP5-AS1Q96IT6 56 aa1.84□□□□□ -2.11
LINC00343-211ENST00000608426 RPS27LQ71UM5 84 aaKnown RBP1.83□□□□□ -2.12
LINC00343-211ENST00000608426 LYNX1G3V0Z9 82 aa1.82□□□□□ -2.12
LINC00343-211ENST00000608426 ANKRD17O75179 2603 aaKnown RBP1.81□□□□□ -2.12
LINC00343-211ENST00000608426 URB1O60287 2271 aaKnown RBP1.81□□□□□ -2.12
LINC00343-211ENST00000608426 K7EQZ3 153 aa1.81□□□□□ -2.12
LINC00343-211ENST00000608426 MRPL34Q9BQ48 92 aaKnown RBP1.8□□□□□ -2.12
LINC00343-211ENST00000608426 TTTY10Q9BZA0 68 aa1.8□□□□□ -2.12
LINC00343-211ENST00000608426 ALMS1Q8TCU4 4167 aa1.79□□□□□ -2.12
LINC00343-211ENST00000608426 COX6B2Q6YFQ2 88 aa1.79□□□□□ -2.12
LINC00343-211ENST00000608426 USMG5Q96IX5 58 aa1.79□□□□□ -2.12
LINC00343-211ENST00000608426 MINOS1Q5TGZ0 78 aa1.78□□□□□ -2.12
LINC00343-211ENST00000608426 TP53AIP1Q9HCN2 124 aa1.78□□□□□ -2.12
LINC00343-211ENST00000608426 I3L2K1 104 aa1.77□□□□□ -2.13
LINC00343-211ENST00000608426 C6orf48Q9UBA6 75 aa1.77□□□□□ -2.13
LINC00343-211ENST00000608426 KNTC1P50748 2209 aa1.76□□□□□ -2.13
LINC00343-211ENST00000608426 ASXL3Q9C0F0 2248 aa1.76□□□□□ -2.13
LINC00343-211ENST00000608426 LYNX1P0DP58 116 aa1.76□□□□□ -2.13
LINC00343-211ENST00000608426 PIGYQ3MUY2 71 aa1.76□□□□□ -2.13
LINC00343-211ENST00000608426 LINC01590Q5TEZ4 76 aa1.76□□□□□ -2.13
LINC00343-211ENST00000608426 DEFB123Q8N688 67 aa1.76□□□□□ -2.13
LINC00343-211ENST00000608426 H0YAA0 97 aa1.75□□□□□ -2.13
LINC00343-211ENST00000608426 CCL22O00626 93 aa1.75□□□□□ -2.13
LINC00343-211ENST00000608426 TENM1Q9UKZ4 2725 aa1.75□□□□□ -2.13
LINC00343-211ENST00000608426 POLR2KP53803 58 aaKnown RBP1.74□□□□□ -2.13
LINC00343-211ENST00000608426 C10orf95Q9H7T3 257 aa1.72□□□□□ -2.13
LINC00343-211ENST00000608426 ASCC3Q8N3C0 2202 aaKnown RBP1.71□□□□□ -2.14
LINC00343-211ENST00000608426 RPL39P62891 51 aaKnown RBP1.71□□□□□ -2.14
LINC00343-211ENST00000608426 COX6A2Q02221 97 aa1.71□□□□□ -2.14
LINC00343-211ENST00000608426 Q6ZSA8 131 aa1.71□□□□□ -2.14
LINC00343-211ENST00000608426 WFDC13Q8IUB5 93 aa1.71□□□□□ -2.14
LINC00343-211ENST00000608426 H3BSH0 61 aa1.7□□□□□ -2.14
LINC00343-211ENST00000608426 WFDC10BQ8IUB3 73 aa1.7□□□□□ -2.14
LINC00343-211ENST00000608426 CNOT1A5YKK6 2376 aaKnown RBP1.69□□□□□ -2.14
LINC00343-211ENST00000608426 IGLV5-48A0A075B6I7 105 aa1.69□□□□□ -2.14
LINC00343-211ENST00000608426 K7EIL1 84 aa1.69□□□□□ -2.14
LINC00343-211ENST00000608426 RPS27P42677 84 aaKnown RBP1.69□□□□□ -2.14
LINC00343-211ENST00000608426 LELP1Q5T871 98 aa1.69□□□□□ -2.14
LINC00343-211ENST00000608426 RPL39LQ96EH5 51 aaKnown RBP1.69□□□□□ -2.14
LINC00343-211ENST00000608426 CACNA1EQ15878 2313 aa1.69□□□□□ -2.14
LINC00343-211ENST00000608426 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.69□□□□□ -2.14
LINC00343-211ENST00000608426 AHCTF1Q8WYP5 2266 aa1.69□□□□□ -2.14
LINC00343-211ENST00000608426 HELZ2Q9BYK8 2649 aaKnown RBP1.68□□□□□ -2.14
LINC00343-211ENST00000608426 H1FX-AS1Q4G0G2 97 aa1.67□□□□□ -2.14
LINC00343-211ENST00000608426 CACNA1BQ00975 2339 aa1.65□□□□□ -2.15
LINC00343-211ENST00000608426 DEFB130BP0DP73 79 aa1.65□□□□□ -2.15
LINC00343-211ENST00000608426 DEFB130AP0DP74 79 aa1.65□□□□□ -2.15
LINC00343-211ENST00000608426 SPINK9Q5DT21 86 aa1.65□□□□□ -2.15
LINC00343-211ENST00000608426 KAAG1Q9UBP8 84 aa1.65□□□□□ -2.15
LINC00343-211ENST00000608426 PRO0255Q9UI72 69 aa1.64□□□□□ -2.15
LINC00343-211ENST00000608426 SPRR1AP35321 89 aa1.63□□□□□ -2.15
LINC00343-211ENST00000608426 PRCDQ00LT1 54 aa1.63□□□□□ -2.15
LINC00343-211ENST00000608426 LEAP2Q969E1 77 aa1.63□□□□□ -2.15
LINC00343-211ENST00000608426 APLNQ9ULZ1 77 aa1.63□□□□□ -2.15
LINC00343-211ENST00000608426 COL6A6A6NMZ7 2263 aa1.63□□□□□ -2.15
LINC00343-211ENST00000608426 DEFB131AP59861 70 aa1.62□□□□□ -2.15
LINC00343-211ENST00000608426 DOPEY2Q9Y3R5 2298 aa1.62□□□□□ -2.15
LINC00343-211ENST00000608426 PTPRQQ9UMZ3 2332 aa1.62□□□□□ -2.15
LINC00343-211ENST00000608426 MMP24-AS1A0A0U1RRL7 71 aa1.61□□□□□ -2.15
LINC00343-211ENST00000608426 WT1-ASQ06250 92 aa1.61□□□□□ -2.15
LINC00343-211ENST00000608426 DEFB119Q8N690 84 aa1.61□□□□□ -2.15
LINC00343-211ENST00000608426 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
LINC00343-211ENST00000608426 DEFB105AQ8NG35 78 aa1.6□□□□□ -2.15
LINC00343-211ENST00000608426 PIEZO2Q9H5I5 2752 aa1.6□□□□□ -2.15
LINC00343-211ENST00000608426 FAM208BQ5VWN6 2430 aa1.6□□□□□ -2.15
LINC00343-211ENST00000608426 FLG2Q5D862 2391 aaPredicted RBP1.59□□□□□ -2.16
LINC00343-211ENST00000608426 ZDBF2Q9HCK1 2354 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms