RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 ABCC8Q09428 1581 aa2.04□□□□□ -2.08
TUBE1-209ENST00000604814 CACNA1EQ15878 2313 aa2.04□□□□□ -2.08
TUBE1-209ENST00000604814 NRXN3Q9Y4C0 1643 aa2.04□□□□□ -2.08
TUBE1-209ENST00000604814 FAM208AQ9UK61 1670 aaKnown RBP2.04□□□□□ -2.08
TUBE1-209ENST00000604814 MRPL33O75394 65 aaKnown RBP2.03□□□□□ -2.08
TUBE1-209ENST00000604814 CNFNQ9BYD5 112 aa2.03□□□□□ -2.08
TUBE1-209ENST00000604814 C10orf95Q9H7T3 257 aa2.03□□□□□ -2.08
TUBE1-209ENST00000604814 MRPL34Q9BQ48 92 aaKnown RBP2.02□□□□□ -2.09
TUBE1-209ENST00000604814 SORL1Q92673 2214 aa2.02□□□□□ -2.09
TUBE1-209ENST00000604814 OTOGLQ3ZCN5 2332 aa2.01□□□□□ -2.09
TUBE1-209ENST00000604814 ATP7AQ04656 1500 aa2.01□□□□□ -2.09
TUBE1-209ENST00000604814 DEFB131BA0A096LNP1 70 aa2.01□□□□□ -2.09
TUBE1-209ENST00000604814 SMIM27A0A1W2PRY6 76 aa2.01□□□□□ -2.09
TUBE1-209ENST00000604814 IGIPA6NJ69 53 aa2.01□□□□□ -2.09
TUBE1-209ENST00000604814 RP1L1Q8IWN7 2480 aaPredicted RBP2.01□□□□□ -2.09
TUBE1-209ENST00000604814 CLTCL1P53675 1640 aa2.01□□□□□ -2.09
TUBE1-209ENST00000604814 PLNP26678 52 aa2□□□□□ -2.09
TUBE1-209ENST00000604814 CRIP1P50238 77 aa2□□□□□ -2.09
TUBE1-209ENST00000604814 PRO0255Q9UI72 69 aa2□□□□□ -2.09
TUBE1-209ENST00000604814 DDX60LQ5H9U9 1706 aaKnown RBP2□□□□□ -2.09
TUBE1-209ENST00000604814 IQGAP1P46940 1657 aa2□□□□□ -2.09
TUBE1-209ENST00000604814 SNRPGP62308 76 aaKnown RBP2□□□□□ -2.09
TUBE1-209ENST00000604814 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.99□□□□□ -2.095e-7■■□□□ 11.4
TUBE1-209ENST00000604814 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
TUBE1-209ENST00000604814 COX6A2Q02221 97 aa1.99□□□□□ -2.09
TUBE1-209ENST00000604814 DOPEY2Q9Y3R5 2298 aa1.98□□□□□ -2.09
TUBE1-209ENST00000604814 Q8IZM0 81 aa1.96□□□□□ -2.1
TUBE1-209ENST00000604814 ROS1P08922 2347 aa1.95□□□□□ -2.1
TUBE1-209ENST00000604814 CDKN2A-AS1Q9UH64 79 aa1.95□□□□□ -2.1
TUBE1-209ENST00000604814 COL6A6A6NMZ7 2263 aa1.95□□□□□ -2.1
TUBE1-209ENST00000604814 CNOT1A5YKK6 2376 aaKnown RBP1.95□□□□□ -2.1
TUBE1-209ENST00000604814 DEPDC5O75140 1603 aa1.95□□□□□ -2.1
TUBE1-209ENST00000604814 TNRC6CQ9HCJ0 1690 aaKnown RBP1.95□□□□□ -2.1
TUBE1-209ENST00000604814 LINC01546A6NGU7 62 aa1.94□□□□□ -2.1
TUBE1-209ENST00000604814 CCL22O00626 93 aa1.94□□□□□ -2.1
TUBE1-209ENST00000604814 NDUFA3O95167 84 aa1.94□□□□□ -2.1
TUBE1-209ENST00000604814 COX6B1P14854 86 aa1.94□□□□□ -2.1
TUBE1-209ENST00000604814 DDX60Q8IY21 1712 aaKnown RBP1.94□□□□□ -2.1
TUBE1-209ENST00000604814 PLCE1Q9P212 2302 aa1.93□□□□□ -2.1
TUBE1-209ENST00000604814 ASH1LQ9NR48 2969 aaKnown RBP1.93□□□□□ -2.1
TUBE1-209ENST00000604814 A0A0D9SG42 100 aa1.93□□□□□ -2.1
TUBE1-209ENST00000604814 COX6B2Q6YFQ2 88 aa1.93□□□□□ -2.1
TUBE1-209ENST00000604814 SPINK4O60575 86 aa1.93□□□□□ -2.1
TUBE1-209ENST00000604814 HIVEP2P31629 2446 aa1.92□□□□□ -2.1
TUBE1-209ENST00000604814 SAMD9LQ8IVG5 1584 aa1.9□□□□□ -2.11
TUBE1-209ENST00000604814 PIEZO2Q9H5I5 2752 aa1.9□□□□□ -2.11
TUBE1-209ENST00000604814 H0YGX0 51 aa1.9□□□□□ -2.11
TUBE1-209ENST00000604814 PRO3102Q9H379 93 aa1.9□□□□□ -2.11
TUBE1-209ENST00000604814 TIMM8BQ9Y5J9 83 aaPredicted RBP1.9□□□□□ -2.11
TUBE1-209ENST00000604814 C4AP0C0L4 1744 aa1.89□□□□□ -2.11
TUBE1-209ENST00000604814 LINC00158P58513 81 aa1.88□□□□□ -2.11
TUBE1-209ENST00000604814 LELP1Q5T871 98 aa1.88□□□□□ -2.11
TUBE1-209ENST00000604814 APLNQ9ULZ1 77 aa1.88□□□□□ -2.11
TUBE1-209ENST00000604814 GCC2Q8IWJ2 1684 aa1.88□□□□□ -2.11
TUBE1-209ENST00000604814 TOGARAM1Q9Y4F4 1720 aa1.88□□□□□ -2.11
TUBE1-209ENST00000604814 SPRR1AP35321 89 aa1.87□□□□□ -2.11
TUBE1-209ENST00000604814 BPTFQ12830 3046 aa1.87□□□□□ -2.11
TUBE1-209ENST00000604814 DUOX1Q9NRD9 1551 aa1.87□□□□□ -2.11
TUBE1-209ENST00000604814 LOC730098B7Z3J9 87 aa1.86□□□□□ -2.11
TUBE1-209ENST00000604814 KRTAP10-4P60372 401 aaPredicted RBP1.85□□□□□ -2.11
TUBE1-209ENST00000604814 KRTAP21-3Q3LHN1 58 aa1.85□□□□□ -2.11
TUBE1-209ENST00000604814 USF3Q68DE3 2245 aa1.85□□□□□ -2.11
TUBE1-209ENST00000604814 PTPRZ1P23471 2315 aaPredicted RBP1.85□□□□□ -2.11
TUBE1-209ENST00000604814 PTPRQQ9UMZ3 2332 aa1.85□□□□□ -2.11
TUBE1-209ENST00000604814 Q5VSD8 79 aa1.84□□□□□ -2.12
TUBE1-209ENST00000604814 C2CD3Q4AC94 2353 aa1.84□□□□□ -2.12
TUBE1-209ENST00000604814 H1FX-AS1Q4G0G2 97 aa1.83□□□□□ -2.12
TUBE1-209ENST00000604814 DEFB105AQ8NG35 78 aa1.83□□□□□ -2.12
TUBE1-209ENST00000604814 LMO7Q8WWI1 1683 aa1.83□□□□□ -2.12
TUBE1-209ENST00000604814 H0YAA0 97 aa1.82□□□□□ -2.12
TUBE1-209ENST00000604814 SPRR1BP22528 89 aa1.82□□□□□ -2.12
TUBE1-209ENST00000604814 C4BP0C0L5 1744 aa1.82□□□□□ -2.12
TUBE1-209ENST00000604814 LYNX1G3V0Z9 82 aa1.81□□□□□ -2.12
TUBE1-209ENST00000604814 PRB3Q04118 309 aaPredicted RBP1.8□□□□□ -2.12
TUBE1-209ENST00000604814 TMEM167BQ9NRX6 74 aa1.8□□□□□ -2.12
TUBE1-209ENST00000604814 SPTBN2O15020 2390 aa1.79□□□□□ -2.12
TUBE1-209ENST00000604814 MINOS1Q5TGZ0 78 aa1.79□□□□□ -2.12
TUBE1-209ENST00000604814 WFDC13Q8IUB5 93 aa1.79□□□□□ -2.12
TUBE1-209ENST00000604814 LINC00308Q8TCZ7 52 aa1.79□□□□□ -2.12
TUBE1-209ENST00000604814 ZNF462Q96JM2 2506 aa1.77□□□□□ -2.13
TUBE1-209ENST00000604814 CACNA1HO95180 2353 aa1.77□□□□□ -2.13
TUBE1-209ENST00000604814 KLK9Q2XQG4 91 aa1.76□□□□□ -2.13
TUBE1-209ENST00000604814 TRIOBPQ9H2D6 2365 aa1.75□□□□□ -2.13
TUBE1-209ENST00000604814 PDE4DIPQ5VU43 2346 aa1.75□□□□□ -2.13
TUBE1-209ENST00000604814 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
TUBE1-209ENST00000604814 C6orf48Q9UBA6 75 aa1.73□□□□□ -2.13
TUBE1-209ENST00000604814 SPTBN1Q01082 2364 aaKnown RBP1.73□□□□□ -2.13
TUBE1-209ENST00000604814 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
TUBE1-209ENST00000604814 IAPPP10997 89 aa1.72□□□□□ -2.13
TUBE1-209ENST00000604814 TFF3Q07654 80 aa1.72□□□□□ -2.13
TUBE1-209ENST00000604814 SMIM2Q9BVW6 85 aa1.71□□□□□ -2.14
TUBE1-209ENST00000604814 DEFB130BP0DP73 79 aa1.7□□□□□ -2.14
TUBE1-209ENST00000604814 DEFB130AP0DP74 79 aa1.7□□□□□ -2.14
TUBE1-209ENST00000604814 REV3LO60673 3130 aa1.69□□□□□ -2.14
TUBE1-209ENST00000604814 WNK2Q9Y3S1 2297 aa1.69□□□□□ -2.14
TUBE1-209ENST00000604814 HELZ2Q9BYK8 2649 aaKnown RBP1.69□□□□□ -2.14
TUBE1-209ENST00000604814 NDUFA1O15239 70 aa1.68□□□□□ -2.14
TUBE1-209ENST00000604814 TTC28Q96AY4 2481 aa1.68□□□□□ -2.14
TUBE1-209ENST00000604814 ALMS1Q8TCU4 4167 aa1.67□□□□□ -2.14
TUBE1-209ENST00000604814 PKDREJQ9NTG1 2253 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms