RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 PRB2P02812 416 aaPredicted RBP8.19□□□□□ -1.1
CDCA3-212ENST00000604599 VWFP04275 2813 aa8.19□□□□□ -1.1
CDCA3-212ENST00000604599 DEFB113Q30KQ7 82 aa8.19□□□□□ -1.1
CDCA3-212ENST00000604599 LELP1Q5T871 98 aa8.19□□□□□ -1.1
CDCA3-212ENST00000604599 KPRPQ5T749 579 aaPredicted RBP8.18□□□□□ -1.1
CDCA3-212ENST00000604599 Q6ZRU5 148 aa8.18□□□□□ -1.1
CDCA3-212ENST00000604599 PRR15Q8IV56 129 aa8.17□□□□□ -1.1
CDCA3-212ENST00000604599 Q8N377 158 aa8.17□□□□□ -1.1
CDCA3-212ENST00000604599 UNC79Q9P2D8 2635 aa8.17□□□□□ -1.1
CDCA3-212ENST00000604599 Q1T7F1 81 aa8.16□□□□□ -1.1
CDCA3-212ENST00000604599 PMAIP1Q13794 54 aa8.15□□□□□ -1.1
CDCA3-212ENST00000604599 A0A1W2PNM2 257 aa8.15□□□□□ -1.11
CDCA3-212ENST00000604599 LCE6AA0A183 80 aa8.14□□□□□ -1.11
CDCA3-212ENST00000604599 EGFEM1PQ0D2K5 195 aa8.14□□□□□ -1.11
CDCA3-212ENST00000604599 IGLV5-48A0A075B6I7 105 aa8.13□□□□□ -1.11
CDCA3-212ENST00000604599 TRAV22A0A0B4J277 110 aa8.13□□□□□ -1.11
CDCA3-212ENST00000604599 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.13□□□□□ -1.11
CDCA3-212ENST00000604599 K7EQZ3 153 aa8.13□□□□□ -1.11
CDCA3-212ENST00000604599 KRTAP1-3Q8IUG1 177 aa8.13□□□□□ -1.11
CDCA3-212ENST00000604599 ST20-AS1Q8NBB2 130 aa8.13□□□□□ -1.11
CDCA3-212ENST00000604599 ZCCHC13Q8WW36 166 aaKnown RBP8.13□□□□□ -1.11
CDCA3-212ENST00000604599 ETDCA0A1B0GVM5 59 aa8.12□□□□□ -1.11
CDCA3-212ENST00000604599 C1orf137Q5JT78 98 aa8.11□□□□□ -1.11
CDCA3-212ENST00000604599 F8P00451 2351 aa8.11□□□□□ -1.11
CDCA3-212ENST00000604599 DSCR10P59022 87 aa8.11□□□□□ -1.11
CDCA3-212ENST00000604599 WFDC10BQ8IUB3 73 aa8.1□□□□□ -1.11
CDCA3-212ENST00000604599 C15orf56Q8N910 161 aa8.1□□□□□ -1.11
CDCA3-212ENST00000604599 NKAPP1Q8N9T2 125 aa8.1□□□□□ -1.11
CDCA3-212ENST00000604599 HIVEP1P15822 2718 aa8.09□□□□□ -1.11
CDCA3-212ENST00000604599 NOTCH2Q04721 2471 aa8.09□□□□□ -1.11
CDCA3-212ENST00000604599 A8MU10 97 aa8.09□□□□□ -1.11
CDCA3-212ENST00000604599 A8MUN3 132 aa8.09□□□□□ -1.11
CDCA3-212ENST00000604599 SERTAD4-AS1Q5TG53 156 aa8.09□□□□□ -1.11
CDCA3-212ENST00000604599 UBR5O95071 2799 aaPredicted RBP8.09□□□□□ -1.12
CDCA3-212ENST00000604599 Q8NAQ8 132 aa8.08□□□□□ -1.12
CDCA3-212ENST00000604599 Q8NBF4 154 aa8.08□□□□□ -1.12
CDCA3-212ENST00000604599 C7orf33Q8WU49 177 aa8.08□□□□□ -1.12
CDCA3-212ENST00000604599 ANK3Q12955 4377 aaKnown RBP8.08□□□□□ -1.12
CDCA3-212ENST00000604599 RPL37AP8A6NKH3 93 aa8.08□□□□□ -1.12
CDCA3-212ENST00000604599 KCNQ1DNQ9H478 68 aa8.08□□□□□ -1.12
CDCA3-212ENST00000604599 PSCAO43653 123 aa8.07□□□□□ -1.12
CDCA3-212ENST00000604599 SPART-AS1P0CW21 52 aa8.07□□□□□ -1.12
CDCA3-212ENST00000604599 PKD1L1Q8TDX9 2849 aa8.07□□□□□ -1.12
CDCA3-212ENST00000604599 KRTAP26-1Q6PEX3 210 aa8.06□□□□□ -1.12
CDCA3-212ENST00000604599 Q9BRP9 147 aa8.06□□□□□ -1.12
CDCA3-212ENST00000604599 DEFB116Q30KQ4 102 aa8.06□□□□□ -1.12
CDCA3-212ENST00000604599 ITPR2Q14571 2701 aa8.05□□□□□ -1.12
CDCA3-212ENST00000604599 KRTAP10-3P60369 221 aa8.05□□□□□ -1.12
CDCA3-212ENST00000604599 CYP4F30PQ9H0H9 118 aa8.05□□□□□ -1.12
CDCA3-212ENST00000604599 HCG22E2RYF7 251 aa8.05□□□□□ -1.12
CDCA3-212ENST00000604599 TNP2Q05952 138 aa8.05□□□□□ -1.12
CDCA3-212ENST00000604599 Q6ZRX8 168 aa8.05□□□□□ -1.12
CDCA3-212ENST00000604599 A0A0G2JQZ4 141 aa8.04□□□□□ -1.12
CDCA3-212ENST00000604599 A0A1W2PNN7 141 aa8.04□□□□□ -1.12
CDCA3-212ENST00000604599 WFDC13Q8IUB5 93 aa8.04□□□□□ -1.12
CDCA3-212ENST00000604599 APOC4P55056 127 aa8.03□□□□□ -1.12
CDCA3-212ENST00000604599 A0A1B0GW54 56 aa8.03□□□□□ -1.12
CDCA3-212ENST00000604599 DHRS4-AS1Q9P1J3 65 aa8.03□□□□□ -1.12
CDCA3-212ENST00000604599 SYCNQ0VAF6 134 aa8.02□□□□□ -1.12
CDCA3-212ENST00000604599 SPRR4Q96PI1 79 aa8.02□□□□□ -1.12
CDCA3-212ENST00000604599 IGKV2D-24A0A075B6R9 120 aa8.02□□□□□ -1.13
CDCA3-212ENST00000604599 FAM168BA1KXE4 195 aa8.01□□□□□ -1.13
CDCA3-212ENST00000604599 Q5VV11 94 aa8□□□□□ -1.13
CDCA3-212ENST00000604599 LINC00208Q96KT6 92 aa8□□□□□ -1.13
CDCA3-212ENST00000604599 NDUFB1O75438 58 aa7.99□□□□□ -1.13
CDCA3-212ENST00000604599 B9D2Q9BPU9 175 aa7.99□□□□□ -1.13
CDCA3-212ENST00000604599 TENM4Q6N022 2769 aa7.99□□□□□ -1.13
CDCA3-212ENST00000604599 KRTAP4-16G5E9R7 235 aaPredicted RBP7.99□□□□□ -1.13
CDCA3-212ENST00000604599 MP68P56378 58 aa7.99□□□□□ -1.13
CDCA3-212ENST00000604599 HELZ2Q9BYK8 2649 aaKnown RBP7.98□□□□□ -1.13
CDCA3-212ENST00000604599 UBE2BP63146 152 aa7.97□□□□□ -1.13
CDCA3-212ENST00000604599 KRTAP1-1Q07627 177 aa7.97□□□□□ -1.13
CDCA3-212ENST00000604599 TENM1Q9UKZ4 2725 aa7.97□□□□□ -1.13
CDCA3-212ENST00000604599 CHKB-CPT1BH3BT56 60 aa7.97□□□□□ -1.13
CDCA3-212ENST00000604599 LINC00476Q8WZB0 136 aa7.96□□□□□ -1.13
CDCA3-212ENST00000604599 FASNP49327 2511 aaKnown RBP7.96□□□□□ -1.13
CDCA3-212ENST00000604599 BAHCC1Q9P281 2608 aa7.96□□□□□ -1.13
CDCA3-212ENST00000604599 IGLV1-50A0A075B6I6 118 aa7.96□□□□□ -1.14
CDCA3-212ENST00000604599 TEP1Q99973 2627 aaKnown RBP7.95□□□□□ -1.14
CDCA3-212ENST00000604599 RPL37AP61513 92 aaKnown RBP7.95□□□□□ -1.14
CDCA3-212ENST00000604599 PRR15LQ9BU68 103 aa7.94□□□□□ -1.14
CDCA3-212ENST00000604599 SPRR1AP35321 89 aa7.93□□□□□ -1.14
CDCA3-212ENST00000604599 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
CDCA3-212ENST00000604599 A0A087WSZ3 146 aa7.93□□□□□ -1.14
CDCA3-212ENST00000604599 CD164Q04900 197 aa7.93□□□□□ -1.14
CDCA3-212ENST00000604599 Q8N9P0 234 aaPredicted RBP7.93□□□□□ -1.14
CDCA3-212ENST00000604599 HECTD1Q9ULT8 2610 aa7.93□□□□□ -1.14
CDCA3-212ENST00000604599 C16orf90A8MZG2 172 aa7.92□□□□□ -1.14
CDCA3-212ENST00000604599 UBE2AP49459 152 aa7.92□□□□□ -1.14
CDCA3-212ENST00000604599 IGFL1Q6UW32 110 aa7.92□□□□□ -1.14
CDCA3-212ENST00000604599 KRTAP7-1Q8IUC3 87 aa7.92□□□□□ -1.14
CDCA3-212ENST00000604599 H0Y9P7 68 aa7.92□□□□□ -1.14
CDCA3-212ENST00000604599 OTOGQ6ZRI0 2925 aa7.91□□□□□ -1.14
CDCA3-212ENST00000604599 ATRQ13535 2644 aa7.91□□□□□ -1.14
CDCA3-212ENST00000604599 RETNQ9HD89 108 aa7.91□□□□□ -1.14
CDCA3-212ENST00000604599 PDZD2O15018 2839 aa7.9□□□□□ -1.14
CDCA3-212ENST00000604599 TRRAPQ9Y4A5 3859 aa7.9□□□□□ -1.15
CDCA3-212ENST00000604599 MRPL55Q7Z7F7 128 aaKnown RBP7.89□□□□□ -1.15
CDCA3-212ENST00000604599 LIMD2Q9BT23 127 aa7.89□□□□□ -1.15
CDCA3-212ENST00000604599 LINC00588Q9Y4M8 146 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms