RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 LINC00304Q8N9R0 145 aa13.88□□□□□ -0.19
SSX2IP-209ENST00000603677 TRAV23DV6A0A075B6W5 121 aa13.87□□□□□ -0.19
SSX2IP-209ENST00000603677 Q6ZVH6 145 aa13.87□□□□□ -0.19
SSX2IP-209ENST00000603677 HINT1P49773 126 aaPredicted RBP13.86□□□□□ -0.19
SSX2IP-209ENST00000603677 SPAG11AQ6PDA7 123 aa13.86□□□□□ -0.19
SSX2IP-209ENST00000603677 C5orf52A6NGY3 159 aa13.85□□□□□ -0.19
SSX2IP-209ENST00000603677 SPANXDQ9BXN6 97 aa13.85□□□□□ -0.19
SSX2IP-209ENST00000603677 ZNF73O43830 326 aaPredicted RBP13.84□□□□□ -0.19
SSX2IP-209ENST00000603677 EIF4EBP3O60516 100 aaPredicted RBP13.84□□□□□ -0.19
SSX2IP-209ENST00000603677 S100A2P29034 98 aa13.84□□□□□ -0.19
SSX2IP-209ENST00000603677 NPC2P61916 151 aa13.84□□□□□ -0.19
SSX2IP-209ENST00000603677 LINC00483Q53H64 154 aa13.84□□□□□ -0.19
SSX2IP-209ENST00000603677 SCGB1D4Q6XE38 83 aa13.84□□□□□ -0.19
SSX2IP-209ENST00000603677 IFITM1P13164 125 aa13.83□□□□□ -0.2
SSX2IP-209ENST00000603677 HIST3H2BBQ8N257 126 aa13.83□□□□□ -0.2
SSX2IP-209ENST00000603677 TSPAN13O95857 204 aa13.82□□□□□ -0.2
SSX2IP-209ENST00000603677 S100A6P06703 90 aa13.82□□□□□ -0.2
SSX2IP-209ENST00000603677 PRR4Q16378 134 aa13.82□□□□□ -0.2
SSX2IP-209ENST00000603677 ANKRD39Q53RE8 183 aa13.8□□□□□ -0.2
SSX2IP-209ENST00000603677 HIST1H2BLQ99880 126 aa13.8□□□□□ -0.2
SSX2IP-209ENST00000603677 TTTY13Q9BZ97 58 aa13.8□□□□□ -0.2
SSX2IP-209ENST00000603677 Q9BRP9 147 aa13.78□□□□□ -0.2
SSX2IP-209ENST00000603677 C3orf22Q8N5N4 141 aa13.77□□□□□ -0.21
SSX2IP-209ENST00000603677 OR13C6PQ8NH95 151 aa13.77□□□□□ -0.21
SSX2IP-209ENST00000603677 C4orf48Q5BLP8 95 aa13.75□□□□□ -0.21
SSX2IP-209ENST00000603677 ATOH7Q8N100 152 aa13.75□□□□□ -0.21
SSX2IP-209ENST00000603677 HSBP1L1C9JCN9 74 aa13.74□□□□□ -0.21
SSX2IP-209ENST00000603677 SSBP3-AS1Q7Z2R9 100 aa13.74□□□□□ -0.21
SSX2IP-209ENST00000603677 GAGE2AQ6NT46 116 aa13.73□□□□□ -0.21
SSX2IP-209ENST00000603677 DHRS4-AS1Q9P1J3 65 aa13.73□□□□□ -0.21
SSX2IP-209ENST00000603677 ERC2-IT1O76042 136 aa13.72□□□□□ -0.21
SSX2IP-209ENST00000603677 TRBV7-6A0A0J9YX20 115 aa13.7□□□□□ -0.22
SSX2IP-209ENST00000603677 SPINK1P00995 79 aa13.7□□□□□ -0.22
SSX2IP-209ENST00000603677 PCP2Q8IVA1 136 aa13.7□□□□□ -0.22
SSX2IP-209ENST00000603677 RPS29P62273 56 aaKnown RBP13.68□□□□□ -0.22
SSX2IP-209ENST00000603677 SLC25A34Q6PIV7 304 aa13.67□□□□□ -0.22
SSX2IP-209ENST00000603677 ELOF1P60002 83 aaKnown RBP13.66□□□□□ -0.22
SSX2IP-209ENST00000603677 Q8NBF4 154 aa13.66□□□□□ -0.22
SSX2IP-209ENST00000603677 MUSTN1Q8IVN3 82 aa13.65□□□□□ -0.22
SSX2IP-209ENST00000603677 LPAP08519 4548 aa13.63□□□□□ -0.23
SSX2IP-209ENST00000603677 TRAV13-2A0A0B4J235 113 aa13.63□□□□□ -0.23
SSX2IP-209ENST00000603677 SPRR1BP22528 89 aa13.63□□□□□ -0.23
SSX2IP-209ENST00000603677 COX7BP24311 80 aa13.63□□□□□ -0.23
SSX2IP-209ENST00000603677 C6orf99Q4VX62 202 aa13.63□□□□□ -0.23
SSX2IP-209ENST00000603677 FP248Q71RG6 208 aaPredicted RBP13.62□□□□□ -0.23
SSX2IP-209ENST00000603677 A0A1B0GWB2 263 aa13.61□□□□□ -0.23
SSX2IP-209ENST00000603677 A4D1N5 150 aa13.61□□□□□ -0.23
SSX2IP-209ENST00000603677 TPRXLQ17RH7 258 aa13.61□□□□□ -0.23
SSX2IP-209ENST00000603677 MOBPQ13875 183 aa13.6□□□□□ -0.23
SSX2IP-209ENST00000603677 IGLV9-49A0A0B4J1Y8 123 aa13.59□□□□□ -0.23
SSX2IP-209ENST00000603677 A6NDN8 102 aa13.59□□□□□ -0.23
SSX2IP-209ENST00000603677 IGLV7-46A0A075B6I9 117 aa13.57□□□□□ -0.24
SSX2IP-209ENST00000603677 SCGB1D1O95968 90 aa13.57□□□□□ -0.24
SSX2IP-209ENST00000603677 RETNLBQ9BQ08 111 aa13.56□□□□□ -0.24
SSX2IP-209ENST00000603677 ST20-AS1Q8NBB2 130 aa13.55□□□□□ -0.24
SSX2IP-209ENST00000603677 NHP2Q9NX24 153 aaKnown RBP13.54□□□□□ -0.24
SSX2IP-209ENST00000603677 LAMTOR3Q9UHA4 124 aa13.54□□□□□ -0.24
SSX2IP-209ENST00000603677 DLEU1O43261 78 aa13.52□□□□□ -0.25
SSX2IP-209ENST00000603677 C9orf153Q5TBE3 101 aa13.52□□□□□ -0.25
SSX2IP-209ENST00000603677 RNF213Q63HN8 5207 aa13.51□□□□□ -0.25
SSX2IP-209ENST00000603677 TEX49A0A1B0GTD5 131 aa13.5□□□□□ -0.25
SSX2IP-209ENST00000603677 COX8AP10176 69 aa13.5□□□□□ -0.25
SSX2IP-209ENST00000603677 SLC25A20O43772 301 aa13.49□□□□□ -0.25
SSX2IP-209ENST00000603677 VAMP3Q15836 100 aa13.49□□□□□ -0.25
SSX2IP-209ENST00000603677 TAL2Q16559 108 aa13.49□□□□□ -0.25
SSX2IP-209ENST00000603677 CDIP1Q9H305 208 aa13.48□□□□□ -0.25
SSX2IP-209ENST00000603677 SMIM11BQ8TCY0 68 aa13.47□□□□□ -0.25
SSX2IP-209ENST00000603677 Q8N377 158 aa13.46□□□□□ -0.25
SSX2IP-209ENST00000603677 IGLV5-48A0A075B6I7 105 aa13.45□□□□□ -0.26
SSX2IP-209ENST00000603677 HIST1H4GQ99525 98 aa13.43□□□□□ -0.26
SSX2IP-209ENST00000603677 CD164Q04900 197 aa13.42□□□□□ -0.26
SSX2IP-209ENST00000603677 LIMD2Q9BT23 127 aa13.41□□□□□ -0.26
SSX2IP-209ENST00000603677 PRO1933Q9H354 126 aa13.4□□□□□ -0.26
SSX2IP-209ENST00000603677 HIGD1BQ9P298 99 aa13.4□□□□□ -0.26
SSX2IP-209ENST00000603677 DEFB105AQ8NG35 78 aa13.39□□□□□ -0.27
SSX2IP-209ENST00000603677 LINC01547P58512 204 aaPredicted RBP13.37□□□□□ -0.27
SSX2IP-209ENST00000603677 KRTAP13-3Q3SY46 172 aa13.36□□□□□ -0.27
SSX2IP-209ENST00000603677 VAMP8Q9BV40 100 aa13.36□□□□□ -0.27
SSX2IP-209ENST00000603677 A0A0U1RQV1 116 aa13.35□□□□□ -0.27
SSX2IP-209ENST00000603677 SPATA45Q537H7 98 aa13.35□□□□□ -0.27
SSX2IP-209ENST00000603677 BVES-AS1Q5T3Y7 98 aa13.35□□□□□ -0.27
SSX2IP-209ENST00000603677 LINC00575Q6W349 94 aa13.35□□□□□ -0.27
SSX2IP-209ENST00000603677 SMIM29Q86T20 159 aa13.35□□□□□ -0.27
SSX2IP-209ENST00000603677 Q1RN00 199 aa13.34□□□□□ -0.27
SSX2IP-209ENST00000603677 PAM16Q9Y3D7 125 aa13.33□□□□□ -0.28
SSX2IP-209ENST00000603677 hADV29S1A0JD25 119 aa13.32□□□□□ -0.28
SSX2IP-209ENST00000603677 C14orf144Q96I85 54 aa13.32□□□□□ -0.28
SSX2IP-209ENST00000603677 Q5XG85 94 aa13.31□□□□□ -0.28
SSX2IP-209ENST00000603677 H7C2G1 150 aa13.29□□□□□ -0.28
SSX2IP-209ENST00000603677 PPDPFLQ8WWR9 84 aa13.29□□□□□ -0.28
SSX2IP-209ENST00000603677 A0A0B4J2C4 111 aa13.26□□□□□ -0.29
SSX2IP-209ENST00000603677 SNCGO76070 127 aa13.26□□□□□ -0.29
SSX2IP-209ENST00000603677 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.26□□□□□ -0.29
SSX2IP-209ENST00000603677 F8WEM9 126 aa13.25□□□□□ -0.29
SSX2IP-209ENST00000603677 CFC1BP0CG36 223 aa13.25□□□□□ -0.29
SSX2IP-209ENST00000603677 CFC1P0CG37 223 aa13.25□□□□□ -0.29
SSX2IP-209ENST00000603677 RAB37Q96AX2 223 aa13.25□□□□□ -0.29
SSX2IP-209ENST00000603677 TMEM238LA0A1B0GVL6 79 aa13.24□□□□□ -0.29
SSX2IP-209ENST00000603677 A6NJY4 79 aa13.24□□□□□ -0.29
SSX2IP-209ENST00000603677 Q6ZQY7 126 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms