RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 IGLV1-50A0A075B6I6 118 aa9.02□□□□□ -0.97
USE1-210ENST00000601662 A0A1B0GWB2 263 aa9.02□□□□□ -0.97
USE1-210ENST00000601662 GAGE10A6NGK3 116 aa9.02□□□□□ -0.97
USE1-210ENST00000601662 PRO1854Q9UHT4 67 aa9.02□□□□□ -0.97
USE1-210ENST00000601662 TRBV10-3A0A0K0K1G6 114 aa9.01□□□□□ -0.97
USE1-210ENST00000601662 RPL37AP8A6NKH3 93 aa9□□□□□ -0.97
USE1-210ENST00000601662 KRTAP10-4P60372 401 aaPredicted RBP9□□□□□ -0.97
USE1-210ENST00000601662 BATFQ16520 125 aa9□□□□□ -0.97
USE1-210ENST00000601662 KCNQ1DNQ9H478 68 aa9□□□□□ -0.97
USE1-210ENST00000601662 PRYO14603 147 aa8.98□□□□□ -0.97
USE1-210ENST00000601662 RPL13AP40429 203 aaKnown RBP8.98□□□□□ -0.97
USE1-210ENST00000601662 TRAV23DV6A0A075B6W5 121 aa8.97□□□□□ -0.97
USE1-210ENST00000601662 MYCBP2O75592 4640 aa8.96□□□□□ -0.97
USE1-210ENST00000601662 REG3GQ6UW15 175 aa8.96□□□□□ -0.98
USE1-210ENST00000601662 DMBT1Q9UGM3 2413 aaPredicted RBP8.96□□□□□ -0.98
USE1-210ENST00000601662 K7ERJ3 54 aa8.95□□□□□ -0.98
USE1-210ENST00000601662 SMIM11BQ8TCY0 68 aa8.95□□□□□ -0.98
USE1-210ENST00000601662 SNHG12Q9BXW3 62 aa8.95□□□□□ -0.98
USE1-210ENST00000601662 H7C2G1 150 aa8.94□□□□□ -0.98
USE1-210ENST00000601662 ZNF73O43830 326 aaPredicted RBP8.94□□□□□ -0.98
USE1-210ENST00000601662 RPL28P46779 137 aaKnown RBP8.94□□□□□ -0.98
USE1-210ENST00000601662 VAMP3Q15836 100 aa8.94□□□□□ -0.98
USE1-210ENST00000601662 Q1RN00 199 aa8.94□□□□□ -0.98
USE1-210ENST00000601662 SPRR1AP35321 89 aa8.93□□□□□ -0.98
USE1-210ENST00000601662 DIRC1Q969H9 104 aa8.93□□□□□ -0.98
USE1-210ENST00000601662 PSORS1C2Q9UIG4 136 aa8.93□□□□□ -0.98
USE1-210ENST00000601662 TRBV7-6A0A0J9YX20 115 aa8.92□□□□□ -0.98
USE1-210ENST00000601662 J3QL48 77 aa8.92□□□□□ -0.98
USE1-210ENST00000601662 COL5A1-AS1Q5SY13 56 aa8.92□□□□□ -0.98
USE1-210ENST00000601662 KRTAP11-1Q8IUC1 163 aa8.92□□□□□ -0.98
USE1-210ENST00000601662 ETDCA0A1B0GVM5 59 aa8.91□□□□□ -0.98
USE1-210ENST00000601662 BCE1O60756 84 aa8.91□□□□□ -0.98
USE1-210ENST00000601662 C6orf99Q4VX62 202 aa8.91□□□□□ -0.98
USE1-210ENST00000601662 COX6CP09669 75 aa8.9□□□□□ -0.98
USE1-210ENST00000601662 PSMB2P49721 201 aa8.9□□□□□ -0.98
USE1-210ENST00000601662 C1orf137Q5JT78 98 aa8.9□□□□□ -0.98
USE1-210ENST00000601662 TSPAN13O95857 204 aa8.89□□□□□ -0.99
USE1-210ENST00000601662 PKHD1L1Q86WI1 4243 aa8.89□□□□□ -0.99
USE1-210ENST00000601662 KRTAP4-16G5E9R7 235 aaPredicted RBP8.88□□□□□ -0.99
USE1-210ENST00000601662 H0Y9J4 135 aa8.88□□□□□ -0.99
USE1-210ENST00000601662 H0YGX0 51 aa8.88□□□□□ -0.99
USE1-210ENST00000601662 COX7BP24311 80 aa8.88□□□□□ -0.99
USE1-210ENST00000601662 FAM19A1Q7Z5A9 133 aa8.88□□□□□ -0.99
USE1-210ENST00000601662 LRP1Q07954 4544 aaKnown RBP8.87□□□□□ -0.99
USE1-210ENST00000601662 B5MCH6 92 aa8.87□□□□□ -0.99
USE1-210ENST00000601662 UBE2AP49459 152 aa8.87□□□□□ -0.99
USE1-210ENST00000601662 C9orf118A6NHY6 69 aa8.86□□□□□ -0.99
USE1-210ENST00000601662 KRTAP29-1A8MX34 341 aaPredicted RBP8.86□□□□□ -0.99
USE1-210ENST00000601662 SNCGO76070 127 aa8.86□□□□□ -0.99
USE1-210ENST00000601662 IGLV7-43P04211 117 aa8.86□□□□□ -0.99
USE1-210ENST00000601662 SCGB1C2P0DMR2 95 aa8.86□□□□□ -0.99
USE1-210ENST00000601662 ELOF1P60002 83 aaKnown RBP8.86□□□□□ -0.99
USE1-210ENST00000601662 HERC1Q15751 4861 aa8.86□□□□□ -0.99
USE1-210ENST00000601662 TAX1BP3O14907 124 aa8.85□□□□□ -0.99
USE1-210ENST00000601662 TRIAP1O43715 76 aa8.85□□□□□ -0.99
USE1-210ENST00000601662 Q6ZRX8 168 aa8.85□□□□□ -0.99
USE1-210ENST00000601662 SLC25A20O43772 301 aa8.84□□□□□ -0.99
USE1-210ENST00000601662 ZNF861PO60384 105 aa8.84□□□□□ -0.99
USE1-210ENST00000601662 LYRM7Q5U5X0 104 aa8.84□□□□□ -0.99
USE1-210ENST00000601662 FAT3Q8TDW7 4589 aa8.84□□□□□ -0.99
USE1-210ENST00000601662 DHRS4-AS1Q9P1J3 65 aa8.84□□□□□ -0.99
USE1-210ENST00000601662 OXTP01178 125 aa8.83□□□□□ -1
USE1-210ENST00000601662 H3BUT2 72 aa8.82□□□□□ -1
USE1-210ENST00000601662 PRLHP81277 87 aa8.81□□□□□ -1
USE1-210ENST00000601662 LINC00575Q6W349 94 aa8.81□□□□□ -1
USE1-210ENST00000601662 KRTAP13-1Q8IUC0 172 aa8.81□□□□□ -1
USE1-210ENST00000601662 A0A1B0GX51 115 aa8.8□□□□□ -1
USE1-210ENST00000601662 hADV29S1A0JD25 119 aa8.79□□□□□ -1
USE1-210ENST00000601662 NAA38Q9BRA0 125 aaKnown RBP8.79□□□□□ -1
USE1-210ENST00000601662 HIGD2AQ9BW72 106 aa8.79□□□□□ -1
USE1-210ENST00000601662 TRBV20-1A0A075B6N2 111 aa8.78□□□□□ -1
USE1-210ENST00000601662 A0A1W2PPM0 123 aa8.78□□□□□ -1
USE1-210ENST00000601662 FABP2P12104 132 aa8.78□□□□□ -1
USE1-210ENST00000601662 SMCR5Q8TEV8 140 aa8.78□□□□□ -1
USE1-210ENST00000601662 Q9BRP9 147 aa8.78□□□□□ -1
USE1-210ENST00000601662 SPINK6Q6UWN8 80 aa8.77□□□□□ -1.01
USE1-210ENST00000601662 CLEC2BQ92478 149 aa8.76□□□□□ -1.01
USE1-210ENST00000601662 GHRHP01286 108 aa8.75□□□□□ -1.01
USE1-210ENST00000601662 ATXN8Q156A1 80 aa8.75□□□□□ -1.01
USE1-210ENST00000601662 LST1O00453 97 aa8.74□□□□□ -1.01
USE1-210ENST00000601662 TRACP01848 142 aa8.74□□□□□ -1.01
USE1-210ENST00000601662 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.74□□□□□ -1.01
USE1-210ENST00000601662 FAM218AQ96MZ4 157 aa8.74□□□□□ -1.01
USE1-210ENST00000601662 ZNF706Q9Y5V0 76 aaPredicted RBP8.74□□□□□ -1.01
USE1-210ENST00000601662 DNAL4O96015 105 aa8.73□□□□□ -1.01
USE1-210ENST00000601662 OCIAD2Q56VL3 154 aa8.73□□□□□ -1.01
USE1-210ENST00000601662 ERC2-IT1O76042 136 aa8.72□□□□□ -1.01
USE1-210ENST00000601662 TCL1BO95988 128 aa8.72□□□□□ -1.01
USE1-210ENST00000601662 H3BQ85 93 aa8.71□□□□□ -1.02
USE1-210ENST00000601662 MT1HL1P0DM35 61 aa8.71□□□□□ -1.02
USE1-210ENST00000601662 SPCS1Q9Y6A9 102 aa8.7□□□□□ -1.02
USE1-210ENST00000601662 Q6ZQY7 126 aa8.69□□□□□ -1.02
USE1-210ENST00000601662 PPDPFLQ8WWR9 84 aa8.69□□□□□ -1.02
USE1-210ENST00000601662 LINC01600Q96MT4 127 aa8.69□□□□□ -1.02
USE1-210ENST00000601662 TEX49A0A1B0GTD5 131 aa8.68□□□□□ -1.02
USE1-210ENST00000601662 GTF2H5Q6ZYL4 71 aa8.68□□□□□ -1.02
USE1-210ENST00000601662 SPRR4Q96PI1 79 aa8.68□□□□□ -1.02
USE1-210ENST00000601662 ST20-AS1Q8NBB2 130 aa8.67□□□□□ -1.02
USE1-210ENST00000601662 DEFB105AQ8NG35 78 aa8.67□□□□□ -1.02
USE1-210ENST00000601662 ORMDL1Q9P0S3 153 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms