RNA–Protein interactions for RNA: ENST00000601453.2

ATM-225, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-225ENST00000601453 CNOT1A5YKK6 2376 aaKnown RBP-0.01□□□□□ -2.41
ATM-225ENST00000601453 URB2Q14146 1524 aaKnown RBP-0.01□□□□□ -2.41
ATM-225ENST00000601453 CCDC18Q5T9S5 1454 aa-0.01□□□□□ -2.41
ATM-225ENST00000601453 SMIM13P0DJ93 91 aa-0.01□□□□□ -2.41
ATM-225ENST00000601453 SPRR2BP35325 72 aa-0.01□□□□□ -2.41
ATM-225ENST00000601453 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
ATM-225ENST00000601453 ATP5EP2Q5VTU8 51 aa-0.01□□□□□ -2.41
ATM-225ENST00000601453 PRO3102Q9H379 93 aa-0.01□□□□□ -2.41
ATM-225ENST00000601453 ANKRD36A6QL64 1941 aa-0.01□□□□□ -2.41
ATM-225ENST00000601453 KIF20BQ96Q89 1820 aa-0.01□□□□□ -2.41
ATM-225ENST00000601453 HIVEP1P15822 2718 aa-0.01□□□□□ -2.41
ATM-225ENST00000601453 KMT2AQ03164 3969 aa-0.02□□□□□ -2.41
ATM-225ENST00000601453 NCOA2Q15596 1464 aa-0.02□□□□□ -2.41
ATM-225ENST00000601453 MACF1Q9UPN3 7388 aaKnown RBP-0.02□□□□□ -2.41
ATM-225ENST00000601453 ITPR3Q14573 2671 aa-0.02□□□□□ -2.41
ATM-225ENST00000601453 DEFB121Q5J5C9 76 aa-0.02□□□□□ -2.41
ATM-225ENST00000601453 HMCN2Q8NDA2 5059 aa-0.02□□□□□ -2.41
ATM-225ENST00000601453 DOPEY1Q5JWR5 2465 aa-0.02□□□□□ -2.41
ATM-225ENST00000601453 EP300Q09472 2414 aaPredicted RBP-0.02□□□□□ -2.41
ATM-225ENST00000601453 RGPD4Q7Z3J3 1758 aa-0.02□□□□□ -2.41
ATM-225ENST00000601453 KIAA1551Q9HCM1 1747 aa-0.02□□□□□ -2.41
ATM-225ENST00000601453 COL6A3P12111 3177 aa-0.02□□□□□ -2.41
ATM-225ENST00000601453 USP9YO00507 2555 aaPredicted RBP-0.03□□□□□ -2.41
ATM-225ENST00000601453 HMGA1P17096 107 aaKnown RBP-0.03□□□□□ -2.41
ATM-225ENST00000601453 SPRR2AP35326 72 aa-0.03□□□□□ -2.41
ATM-225ENST00000601453 BVES-AS1Q5T3Y7 98 aa-0.03□□□□□ -2.41
ATM-225ENST00000601453 KIF14Q15058 1648 aa-0.03□□□□□ -2.41
ATM-225ENST00000601453 RGPD2P0DJD1 1756 aa-0.04□□□□□ -2.42
ATM-225ENST00000601453 SPG11Q96JI7 2443 aa-0.04□□□□□ -2.42
ATM-225ENST00000601453 LINC00158P58513 81 aa-0.04□□□□□ -2.42
ATM-225ENST00000601453 RGPD3A6NKT7 1758 aaPredicted RBP-0.04□□□□□ -2.42
ATM-225ENST00000601453 COL14A1Q05707 1796 aaKnown RBP-0.04□□□□□ -2.42
ATM-225ENST00000601453 PKD1L3Q7Z443 1732 aa-0.04□□□□□ -2.42
ATM-225ENST00000601453 TACC2O95359 2948 aa-0.05□□□□□ -2.42
ATM-225ENST00000601453 C9orf92A6NGG3 77 aa-0.05□□□□□ -2.42
ATM-225ENST00000601453 NREPQ16612 68 aa-0.05□□□□□ -2.42
ATM-225ENST00000601453 FASNP49327 2511 aaKnown RBP-0.05□□□□□ -2.42
ATM-225ENST00000601453 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.05□□□□□ -2.42
ATM-225ENST00000601453 MED14O60244 1454 aa-0.05□□□□□ -2.42
ATM-225ENST00000601453 ALKQ9UM73 1620 aa-0.05□□□□□ -2.42
ATM-225ENST00000601453 RB1CC1Q8TDY2 1594 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 NDUFA4O00483 81 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 SPRR2EP22531 72 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 KRTAP19-7Q3SYF9 63 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 PCNX1Q96RV3 2341 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 TRANK1O15050 2925 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 HSPG2P98160 4391 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 PRRC2CQ9Y520 2896 aaKnown RBP-0.06□□□□□ -2.42
ATM-225ENST00000601453 MYCBP2O75592 4640 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 HECTD4Q9Y4D8 3996 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 MYO18BQ8IUG5 2567 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 SPTBN4Q9H254 2564 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 BCORQ6W2J9 1755 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 LPAP08519 4548 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 BSNQ9UPA5 3926 aa-0.06□□□□□ -2.42
ATM-225ENST00000601453 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.07□□□□□ -2.427e-8■■■□□ 16.4
ATM-225ENST00000601453 MRPL33O75394 65 aaKnown RBP-0.07□□□□□ -2.42
ATM-225ENST00000601453 MT1AP04731 61 aa-0.07□□□□□ -2.42
ATM-225ENST00000601453 DEFA5Q01523 94 aa-0.07□□□□□ -2.42
ATM-225ENST00000601453 KRTAP19-8Q3LI54 63 aa-0.07□□□□□ -2.42
ATM-225ENST00000601453 C18orf32Q8TCD1 76 aa-0.07□□□□□ -2.42
ATM-225ENST00000601453 ANKRD50Q9ULJ7 1429 aa-0.07□□□□□ -2.42
ATM-225ENST00000601453 AKAP13Q12802 2813 aa-0.07□□□□□ -2.42
ATM-225ENST00000601453 ANKRD11Q6UB99 2663 aaPredicted RBP-0.08□□□□□ -2.42
ATM-225ENST00000601453 KNL1Q8NG31 2342 aa-0.08□□□□□ -2.42
ATM-225ENST00000601453 CEP290O15078 2479 aa-0.08□□□□□ -2.42
ATM-225ENST00000601453 HTTP42858 3142 aa-0.08□□□□□ -2.42
ATM-225ENST00000601453 HECTD1Q9ULT8 2610 aa-0.08□□□□□ -2.42
ATM-225ENST00000601453 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.08□□□□□ -2.42
ATM-225ENST00000601453 LRP2P98164 4655 aa-0.08□□□□□ -2.42
ATM-225ENST00000601453 H3BNG1 76 aa-0.08□□□□□ -2.42
ATM-225ENST00000601453 MT4P47944 62 aa-0.08□□□□□ -2.42
ATM-225ENST00000601453 LRRK2Q5S007 2527 aa-0.08□□□□□ -2.42
ATM-225ENST00000601453 UBR1Q8IWV7 1749 aa-0.08□□□□□ -2.42
ATM-225ENST00000601453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.08□□□□□ -2.42
ATM-225ENST00000601453 MUC2Q02817 5179 aa-0.08□□□□□ -2.42
ATM-225ENST00000601453 ZZEF1O43149 2961 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 NBASA2RRP1 2371 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 RGPD8O14715 1765 aaPredicted RBP-0.09□□□□□ -2.42
ATM-225ENST00000601453 RGPD5Q99666 1765 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 USP32Q8NFA0 1604 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 CICQ96RK0 1608 aaPredicted RBP-0.09□□□□□ -2.42
ATM-225ENST00000601453 PTPN23Q9H3S7 1636 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 MAP3K4Q9Y6R4 1608 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 CCDC88BA6NC98 1476 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 ERVK-7P63135 1459 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 NBEAQ8NFP9 2946 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 UTP20O75691 2785 aaKnown RBP-0.09□□□□□ -2.42
ATM-225ENST00000601453 RGPD1P0DJD0 1748 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 PRLHP81277 87 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 SPRR2FQ96RM1 72 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.09□□□□□ -2.42
ATM-225ENST00000601453 TEX15Q9BXT5 2789 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 TEP1Q99973 2627 aaKnown RBP-0.09□□□□□ -2.42
ATM-225ENST00000601453 RIF1Q5UIP0 2472 aaKnown RBP-0.09□□□□□ -2.42
ATM-225ENST00000601453 NBPF19A0A087WUL8 3843 aa-0.09□□□□□ -2.42
ATM-225ENST00000601453 USP9XQ93008 2570 aaPredicted RBP-0.09□□□□□ -2.42
ATM-225ENST00000601453 SUPT6HQ7KZ85 1726 aaKnown RBP-0.1□□□□□ -2.42
ATM-225ENST00000601453 TNXBP22105 4242 aa-0.1□□□□□ -2.42
ATM-225ENST00000601453 ADAMTS12P58397 1594 aa-0.1□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms