RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 EIF4EBP3O60516 100 aaPredicted RBP5.83□□□□□ -1.48
HIF3A-219ENST00000600879 VPREB1P12018 145 aa5.83□□□□□ -1.48
HIF3A-219ENST00000600879 IFITM1P13164 125 aa5.83□□□□□ -1.48
HIF3A-219ENST00000600879 MUSTN1Q8IVN3 82 aa5.83□□□□□ -1.48
HIF3A-219ENST00000600879 ARL17AQ8IVW1 177 aa5.83□□□□□ -1.48
HIF3A-219ENST00000600879 Q8NDZ9 215 aa5.83□□□□□ -1.48
HIF3A-219ENST00000600879 TYMSOSQ8TAI1 123 aa5.83□□□□□ -1.48
HIF3A-219ENST00000600879 HIST1H4GQ99525 98 aa5.83□□□□□ -1.48
HIF3A-219ENST00000600879 C22orf24Q9Y442 160 aa5.83□□□□□ -1.48
HIF3A-219ENST00000600879 IGLV5-37A0A075B6J1 123 aa5.82□□□□□ -1.48
HIF3A-219ENST00000600879 NCR3O14931 201 aa5.82□□□□□ -1.48
HIF3A-219ENST00000600879 ZNF861PO60384 105 aa5.82□□□□□ -1.48
HIF3A-219ENST00000600879 ANAPC11Q9NYG5 84 aa5.82□□□□□ -1.48
HIF3A-219ENST00000600879 NDUFC2O95298 119 aa5.81□□□□□ -1.48
HIF3A-219ENST00000600879 LBHQ53QV2 105 aaPredicted RBP5.81□□□□□ -1.48
HIF3A-219ENST00000600879 MRPL55Q7Z7F7 128 aaKnown RBP5.81□□□□□ -1.48
HIF3A-219ENST00000600879 GAGE10A6NGK3 116 aa5.8□□□□□ -1.48
HIF3A-219ENST00000600879 TSTD3H0UI37 97 aa5.8□□□□□ -1.48
HIF3A-219ENST00000600879 M0R378 163 aa5.8□□□□□ -1.48
HIF3A-219ENST00000600879 TAL2Q16559 108 aa5.8□□□□□ -1.48
HIF3A-219ENST00000600879 PPDPFQ9H3Y8 114 aa5.8□□□□□ -1.48
HIF3A-219ENST00000600879 IGLV7-46A0A075B6I9 117 aa5.79□□□□□ -1.48
HIF3A-219ENST00000600879 CRYGAP11844 174 aa5.79□□□□□ -1.48
HIF3A-219ENST00000600879 LINC00167Q96N53 147 aa5.79□□□□□ -1.48
HIF3A-219ENST00000600879 A4D1N5 150 aa5.78□□□□□ -1.48
HIF3A-219ENST00000600879 RPL37AP8A6NKH3 93 aa5.78□□□□□ -1.48
HIF3A-219ENST00000600879 HSD52Q0P140 79 aa5.78□□□□□ -1.48
HIF3A-219ENST00000600879 TPRXLQ17RH7 258 aa5.78□□□□□ -1.48
HIF3A-219ENST00000600879 IGKV2-28A0A075B6P5 120 aa5.77□□□□□ -1.49
HIF3A-219ENST00000600879 TRBV10-2A0A0K0K1G8 114 aa5.77□□□□□ -1.49
HIF3A-219ENST00000600879 IGKV2D-28P01615 120 aa5.77□□□□□ -1.49
HIF3A-219ENST00000600879 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
HIF3A-219ENST00000600879 KRTAP13-2Q52LG2 175 aa5.77□□□□□ -1.49
HIF3A-219ENST00000600879 S100A7L2Q5SY68 101 aa5.77□□□□□ -1.49
HIF3A-219ENST00000600879 CEND1Q8N111 149 aa5.77□□□□□ -1.49
HIF3A-219ENST00000600879 OR13C6PQ8NH95 151 aa5.77□□□□□ -1.49
HIF3A-219ENST00000600879 TRBV10-3A0A0K0K1G6 114 aa5.76□□□□□ -1.49
HIF3A-219ENST00000600879 DDTP30046 118 aa5.76□□□□□ -1.49
HIF3A-219ENST00000600879 KRTAP4-1Q9BYQ7 146 aa5.76□□□□□ -1.49
HIF3A-219ENST00000600879 TMEM238LA0A1B0GVL6 79 aa5.75□□□□□ -1.49
HIF3A-219ENST00000600879 A6NDN8 102 aa5.75□□□□□ -1.49
HIF3A-219ENST00000600879 A6NJY4 79 aa5.75□□□□□ -1.49
HIF3A-219ENST00000600879 FXYD2P54710 66 aa5.75□□□□□ -1.49
HIF3A-219ENST00000600879 CTAG1AP78358 180 aa5.75□□□□□ -1.49
HIF3A-219ENST00000600879 LINC00337Q8N6G1 96 aa5.75□□□□□ -1.49
HIF3A-219ENST00000600879 LINC00304Q8N9R0 145 aa5.75□□□□□ -1.49
HIF3A-219ENST00000600879 PRYO14603 147 aa5.74□□□□□ -1.49
HIF3A-219ENST00000600879 IGLV6-57P01721 117 aa5.74□□□□□ -1.49
HIF3A-219ENST00000600879 RPL28P46779 137 aaKnown RBP5.74□□□□□ -1.49
HIF3A-219ENST00000600879 TMEM126AQ9H061 195 aa5.74□□□□□ -1.49
HIF3A-219ENST00000600879 TRAV13-2A0A0B4J235 113 aa5.73□□□□□ -1.49
HIF3A-219ENST00000600879 BCE1O60756 84 aa5.73□□□□□ -1.49
HIF3A-219ENST00000600879 HINT1P49773 126 aaPredicted RBP5.73□□□□□ -1.49
HIF3A-219ENST00000600879 RAB37Q96AX2 223 aa5.73□□□□□ -1.49
HIF3A-219ENST00000600879 CBY1Q9Y3M2 126 aa5.73□□□□□ -1.49
HIF3A-219ENST00000600879 TRAV23DV6A0A075B6W5 121 aa5.72□□□□□ -1.49
HIF3A-219ENST00000600879 CFC1BP0CG36 223 aa5.72□□□□□ -1.49
HIF3A-219ENST00000600879 CFC1P0CG37 223 aa5.72□□□□□ -1.49
HIF3A-219ENST00000600879 KCNQ1DNQ9H478 68 aa5.72□□□□□ -1.49
HIF3A-219ENST00000600879 A0A0B4J2C4 111 aa5.71□□□□□ -1.5
HIF3A-219ENST00000600879 M0R143 59 aa5.71□□□□□ -1.5
HIF3A-219ENST00000600879 BVES-AS1Q5T3Y7 98 aa5.71□□□□□ -1.5
HIF3A-219ENST00000600879 NHP2Q9NX24 153 aaKnown RBP5.71□□□□□ -1.5
HIF3A-219ENST00000600879 ETDCA0A1B0GVM5 59 aa5.7□□□□□ -1.5
HIF3A-219ENST00000600879 H7C2G1 150 aa5.69□□□□□ -1.5
HIF3A-219ENST00000600879 ZNF73O43830 326 aaPredicted RBP5.69□□□□□ -1.5
HIF3A-219ENST00000600879 UBE2AP49459 152 aa5.69□□□□□ -1.5
HIF3A-219ENST00000600879 FAM19A1Q7Z5A9 133 aa5.69□□□□□ -1.5
HIF3A-219ENST00000600879 PCP4L1A6NKN8 68 aa5.68□□□□□ -1.5
HIF3A-219ENST00000600879 K7ERJ3 54 aa5.68□□□□□ -1.5
HIF3A-219ENST00000600879 SPRR1AP35321 89 aa5.68□□□□□ -1.5
HIF3A-219ENST00000600879 BATFQ16520 125 aa5.68□□□□□ -1.5
HIF3A-219ENST00000600879 C6orf99Q4VX62 202 aa5.68□□□□□ -1.5
HIF3A-219ENST00000600879 SMIM11BQ8TCY0 68 aa5.68□□□□□ -1.5
HIF3A-219ENST00000600879 PRO1854Q9UHT4 67 aa5.68□□□□□ -1.5
HIF3A-219ENST00000600879 A0A1B0GWB2 263 aa5.67□□□□□ -1.5
HIF3A-219ENST00000600879 PRLHP81277 87 aa5.67□□□□□ -1.5
HIF3A-219ENST00000600879 Q1RN00 199 aa5.67□□□□□ -1.5
HIF3A-219ENST00000600879 FAM229BQ4G0N7 80 aa5.67□□□□□ -1.5
HIF3A-219ENST00000600879 B5MCH6 92 aa5.66□□□□□ -1.5
HIF3A-219ENST00000600879 KRTAP4-16G5E9R7 235 aaPredicted RBP5.66□□□□□ -1.5
HIF3A-219ENST00000600879 COX7BP24311 80 aa5.66□□□□□ -1.5
HIF3A-219ENST00000600879 ASB16-AS1Q495Z4 193 aa5.66□□□□□ -1.5
HIF3A-219ENST00000600879 C3orf22Q8N5N4 141 aa5.66□□□□□ -1.5
HIF3A-219ENST00000600879 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
HIF3A-219ENST00000600879 KRTAP13-1Q8IUC0 172 aa5.65□□□□□ -1.5
HIF3A-219ENST00000600879 HIGD2AQ9BW72 106 aa5.65□□□□□ -1.5
HIF3A-219ENST00000600879 TRBV7-6A0A0J9YX20 115 aa5.64□□□□□ -1.51
HIF3A-219ENST00000600879 ELOF1P60002 83 aaKnown RBP5.64□□□□□ -1.51
HIF3A-219ENST00000600879 VAMP3Q15836 100 aa5.64□□□□□ -1.51
HIF3A-219ENST00000600879 Q6ZRX8 168 aa5.64□□□□□ -1.51
HIF3A-219ENST00000600879 KRTAP9-7A8MTY7 169 aa5.63□□□□□ -1.51
HIF3A-219ENST00000600879 PSMB2P49721 201 aa5.63□□□□□ -1.51
HIF3A-219ENST00000600879 KRTAP13-3Q3SY46 172 aa5.63□□□□□ -1.51
HIF3A-219ENST00000600879 SMCR5Q8TEV8 140 aa5.62□□□□□ -1.51
HIF3A-219ENST00000600879 Q9BRP9 147 aa5.62□□□□□ -1.51
HIF3A-219ENST00000600879 TRIAP1O43715 76 aa5.61□□□□□ -1.51
HIF3A-219ENST00000600879 SEC61BP60468 96 aaKnown RBP5.61□□□□□ -1.51
HIF3A-219ENST00000600879 MT1HP80294 61 aa5.61□□□□□ -1.51
HIF3A-219ENST00000600879 FP248Q71RG6 208 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms