RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 NPC2P61916 151 aa13.16□□□□□ -0.3
SSBP4-205ENST00000598159 JOSD1Q15040 202 aaPredicted RBP13.16□□□□□ -0.3
SSBP4-205ENST00000598159 Q9BRP9 147 aa13.16□□□□□ -0.3
SSBP4-205ENST00000598159 CDIP1Q9H305 208 aa13.16□□□□□ -0.3
SSBP4-205ENST00000598159 TRAV23DV6A0A075B6W5 121 aa13.15□□□□□ -0.3
SSBP4-205ENST00000598159 EIF4EBP3O60516 100 aaPredicted RBP13.15□□□□□ -0.3
SSBP4-205ENST00000598159 CBY1Q9Y3M2 126 aa13.15□□□□□ -0.3
SSBP4-205ENST00000598159 SPINK1P00995 79 aa13.14□□□□□ -0.31
SSBP4-205ENST00000598159 MUC2Q02817 5179 aa13.14□□□□□ -0.31
SSBP4-205ENST00000598159 TIMM17BO60830 172 aa13.13□□□□□ -0.31
SSBP4-205ENST00000598159 SSBP3-AS1Q7Z2R9 100 aa13.13□□□□□ -0.31
SSBP4-205ENST00000598159 A0A0U1RQV1 116 aa13.12□□□□□ -0.31
SSBP4-205ENST00000598159 ZNF73O43830 326 aaPredicted RBP13.12□□□□□ -0.31
SSBP4-205ENST00000598159 FP248Q71RG6 208 aaPredicted RBP13.12□□□□□ -0.31
SSBP4-205ENST00000598159 HINT1P49773 126 aaPredicted RBP13.11□□□□□ -0.31
SSBP4-205ENST00000598159 LINC00308Q8TCZ7 52 aa13.11□□□□□ -0.31
SSBP4-205ENST00000598159 LITAFQ99732 161 aa13.11□□□□□ -0.31
SSBP4-205ENST00000598159 SPANXCQ9NY87 97 aa13.1□□□□□ -0.31
SSBP4-205ENST00000598159 IGLV9-49A0A0B4J1Y8 123 aa13.09□□□□□ -0.31
SSBP4-205ENST00000598159 ZNF815PA8K554 130 aa13.08□□□□□ -0.32
SSBP4-205ENST00000598159 C3orf79P0CE67 100 aa13.08□□□□□ -0.32
SSBP4-205ENST00000598159 MOBPQ13875 183 aa13.08□□□□□ -0.32
SSBP4-205ENST00000598159 C5orf52A6NGY3 159 aa13.07□□□□□ -0.32
SSBP4-205ENST00000598159 COA6Q5JTJ3 125 aaKnown RBP13.07□□□□□ -0.32
SSBP4-205ENST00000598159 OR13C6PQ8NH95 151 aa13.05□□□□□ -0.32
SSBP4-205ENST00000598159 RPS29P62273 56 aaKnown RBP13.04□□□□□ -0.32
SSBP4-205ENST00000598159 KRTDAPP60985 99 aa13.02□□□□□ -0.33
SSBP4-205ENST00000598159 LINC00518Q8N0U6 118 aa13.02□□□□□ -0.33
SSBP4-205ENST00000598159 SPANXDQ9BXN6 97 aa13.02□□□□□ -0.33
SSBP4-205ENST00000598159 TTTY13Q9BZ97 58 aa13.01□□□□□ -0.33
SSBP4-205ENST00000598159 ST20-AS1Q8NBB2 130 aa12.99□□□□□ -0.33
SSBP4-205ENST00000598159 DHRS4-AS1Q9P1J3 65 aa12.99□□□□□ -0.33
SSBP4-205ENST00000598159 C20orf202A1L168 122 aa12.98□□□□□ -0.33
SSBP4-205ENST00000598159 C9orf153Q5TBE3 101 aa12.97□□□□□ -0.33
SSBP4-205ENST00000598159 Q8N377 158 aa12.97□□□□□ -0.33
SSBP4-205ENST00000598159 SLC25A20O43772 301 aa12.96□□□□□ -0.33
SSBP4-205ENST00000598159 KRTAP13-3Q3SY46 172 aa12.96□□□□□ -0.33
SSBP4-205ENST00000598159 SCGB1D4Q6XE38 83 aa12.96□□□□□ -0.33
SSBP4-205ENST00000598159 COPS9Q8WXC6 57 aa12.95□□□□□ -0.34
SSBP4-205ENST00000598159 SPRR1BP22528 89 aa12.94□□□□□ -0.34
SSBP4-205ENST00000598159 AKR1D1P51857 326 aa12.94□□□□□ -0.34
SSBP4-205ENST00000598159 SLC25A34Q6PIV7 304 aa12.94□□□□□ -0.34
SSBP4-205ENST00000598159 IFITM1P13164 125 aa12.92□□□□□ -0.34
SSBP4-205ENST00000598159 COX7BP24311 80 aa12.92□□□□□ -0.34
SSBP4-205ENST00000598159 MUC17Q685J3 4493 aa12.92□□□□□ -0.34
SSBP4-205ENST00000598159 ELOF1P60002 83 aaKnown RBP12.91□□□□□ -0.34
SSBP4-205ENST00000598159 C6orf99Q4VX62 202 aa12.91□□□□□ -0.34
SSBP4-205ENST00000598159 ANKRD39Q53RE8 183 aa12.91□□□□□ -0.34
SSBP4-205ENST00000598159 Q6ZVH6 145 aa12.91□□□□□ -0.34
SSBP4-205ENST00000598159 S100A1P23297 94 aa12.89□□□□□ -0.35
SSBP4-205ENST00000598159 LAMTOR3Q9UHA4 124 aa12.89□□□□□ -0.35
SSBP4-205ENST00000598159 ATOH7Q8N100 152 aa12.88□□□□□ -0.35
SSBP4-205ENST00000598159 TRBV7-6A0A0J9YX20 115 aa12.87□□□□□ -0.35
SSBP4-205ENST00000598159 SNRPEP62304 92 aaKnown RBP12.86□□□□□ -0.35
SSBP4-205ENST00000598159 TAL2Q16559 108 aa12.86□□□□□ -0.35
SSBP4-205ENST00000598159 MUSTN1Q8IVN3 82 aa12.85□□□□□ -0.35
SSBP4-205ENST00000598159 ASB16-AS1Q495Z4 193 aa12.84□□□□□ -0.35
SSBP4-205ENST00000598159 PCP2Q8IVA1 136 aa12.84□□□□□ -0.35
SSBP4-205ENST00000598159 A6NDN8 102 aa12.83□□□□□ -0.36
SSBP4-205ENST00000598159 A0A1B0GWB2 263 aa12.82□□□□□ -0.36
SSBP4-205ENST00000598159 TEX49A0A1B0GTD5 131 aa12.81□□□□□ -0.36
SSBP4-205ENST00000598159 LCE2AQ5TA79 106 aaPredicted RBP12.81□□□□□ -0.36
SSBP4-205ENST00000598159 DEFB105AQ8NG35 78 aa12.81□□□□□ -0.36
SSBP4-205ENST00000598159 SEC61BP60468 96 aaKnown RBP12.8□□□□□ -0.36
SSBP4-205ENST00000598159 FAT4Q6V0I7 4981 aa12.79□□□□□ -0.36
SSBP4-205ENST00000598159 LIMD2Q9BT23 127 aa12.79□□□□□ -0.36
SSBP4-205ENST00000598159 TRAV13-2A0A0B4J235 113 aa12.78□□□□□ -0.36
SSBP4-205ENST00000598159 A4D1N5 150 aa12.77□□□□□ -0.37
SSBP4-205ENST00000598159 HRCT1Q6UXD1 115 aa12.77□□□□□ -0.37
SSBP4-205ENST00000598159 S100A2P29034 98 aa12.76□□□□□ -0.37
SSBP4-205ENST00000598159 PRO1933Q9H354 126 aa12.76□□□□□ -0.37
SSBP4-205ENST00000598159 CD164Q04900 197 aa12.75□□□□□ -0.37
SSBP4-205ENST00000598159 Q1RN00 199 aa12.75□□□□□ -0.37
SSBP4-205ENST00000598159 HIST3H2BBQ8N257 126 aa12.75□□□□□ -0.37
SSBP4-205ENST00000598159 HIST1H2BLQ99880 126 aa12.74□□□□□ -0.37
SSBP4-205ENST00000598159 XP32Q5T750 250 aa12.73□□□□□ -0.37
SSBP4-205ENST00000598159 HSBP1L1C9JCN9 74 aa12.72□□□□□ -0.37
SSBP4-205ENST00000598159 NHP2Q9NX24 153 aaKnown RBP12.72□□□□□ -0.37
SSBP4-205ENST00000598159 IGLV5-48A0A075B6I7 105 aa12.71□□□□□ -0.37
SSBP4-205ENST00000598159 LINC01547P58512 204 aaPredicted RBP12.71□□□□□ -0.37
SSBP4-205ENST00000598159 SMIM29Q86T20 159 aa12.71□□□□□ -0.37
SSBP4-205ENST00000598159 SMIM11BQ8TCY0 68 aa12.71□□□□□ -0.37
SSBP4-205ENST00000598159 H7C2G1 150 aa12.69□□□□□ -0.38
SSBP4-205ENST00000598159 S100A6P06703 90 aa12.67□□□□□ -0.38
SSBP4-205ENST00000598159 VAMP3Q15836 100 aa12.67□□□□□ -0.38
SSBP4-205ENST00000598159 Q5XG85 94 aa12.65□□□□□ -0.38
SSBP4-205ENST00000598159 KRTAP4-1Q9BYQ7 146 aa12.65□□□□□ -0.38
SSBP4-205ENST00000598159 LINC00575Q6W349 94 aa12.59□□□□□ -0.39
SSBP4-205ENST00000598159 A0A0G2JQZ4 141 aa12.56□□□□□ -0.4
SSBP4-205ENST00000598159 hADV29S1A0JD25 119 aa12.56□□□□□ -0.4
SSBP4-205ENST00000598159 C9orf92A6NGG3 77 aa12.56□□□□□ -0.4
SSBP4-205ENST00000598159 SCGB1D1O95968 90 aa12.56□□□□□ -0.4
SSBP4-205ENST00000598159 C1orf195Q5TG92 126 aa12.55□□□□□ -0.4
SSBP4-205ENST00000598159 KRTAP9-2Q9BYQ4 174 aa12.55□□□□□ -0.4
SSBP4-205ENST00000598159 F8WEM9 126 aa12.54□□□□□ -0.4
SSBP4-205ENST00000598159 HIST1H4GQ99525 98 aa12.53□□□□□ -0.4
SSBP4-205ENST00000598159 TCL1BO95988 128 aa12.51□□□□□ -0.41
SSBP4-205ENST00000598159 COX8AP10176 69 aa12.51□□□□□ -0.41
SSBP4-205ENST00000598159 Q6ZQY7 126 aa12.51□□□□□ -0.41
SSBP4-205ENST00000598159 PCOTHQ58A44 107 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms