RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 GAGE2AQ6NT46 116 aa10.24□□□□□ -0.77
CHMP2A-203ENST00000597209 MUC2Q02817 5179 aa10.24□□□□□ -0.77
CHMP2A-203ENST00000597209 TRAV23DV6A0A075B6W5 121 aa10.23□□□□□ -0.77
CHMP2A-203ENST00000597209 EIF4EBP3O60516 100 aaPredicted RBP10.23□□□□□ -0.77
CHMP2A-203ENST00000597209 TIMM17BO60830 172 aa10.23□□□□□ -0.77
CHMP2A-203ENST00000597209 JOSD1Q15040 202 aaPredicted RBP10.23□□□□□ -0.77
CHMP2A-203ENST00000597209 CBY1Q9Y3M2 126 aa10.23□□□□□ -0.77
CHMP2A-203ENST00000597209 SPINK1P00995 79 aa10.22□□□□□ -0.77
CHMP2A-203ENST00000597209 NPC2P61916 151 aa10.22□□□□□ -0.77
CHMP2A-203ENST00000597209 FP248Q71RG6 208 aaPredicted RBP10.22□□□□□ -0.77
CHMP2A-203ENST00000597209 SSBP3-AS1Q7Z2R9 100 aa10.22□□□□□ -0.77
CHMP2A-203ENST00000597209 LITAFQ99732 161 aa10.22□□□□□ -0.77
CHMP2A-203ENST00000597209 CDIP1Q9H305 208 aa10.22□□□□□ -0.77
CHMP2A-203ENST00000597209 ZNF73O43830 326 aaPredicted RBP10.21□□□□□ -0.77
CHMP2A-203ENST00000597209 A0A0U1RQV1 116 aa10.2□□□□□ -0.78
CHMP2A-203ENST00000597209 COA6Q5JTJ3 125 aaKnown RBP10.2□□□□□ -0.78
CHMP2A-203ENST00000597209 LINC00308Q8TCZ7 52 aa10.2□□□□□ -0.78
CHMP2A-203ENST00000597209 SPANXCQ9NY87 97 aa10.2□□□□□ -0.78
CHMP2A-203ENST00000597209 C5orf52A6NGY3 159 aa10.19□□□□□ -0.78
CHMP2A-203ENST00000597209 C3orf79P0CE67 100 aa10.18□□□□□ -0.78
CHMP2A-203ENST00000597209 RPS29P62273 56 aaKnown RBP10.18□□□□□ -0.78
CHMP2A-203ENST00000597209 HINT1P49773 126 aaPredicted RBP10.17□□□□□ -0.78
CHMP2A-203ENST00000597209 MOBPQ13875 183 aa10.17□□□□□ -0.78
CHMP2A-203ENST00000597209 IGLV9-49A0A0B4J1Y8 123 aa10.16□□□□□ -0.78
CHMP2A-203ENST00000597209 ZNF815PA8K554 130 aa10.16□□□□□ -0.78
CHMP2A-203ENST00000597209 MUC17Q685J3 4493 aa10.14□□□□□ -0.79
CHMP2A-203ENST00000597209 SPANXDQ9BXN6 97 aa10.14□□□□□ -0.79
CHMP2A-203ENST00000597209 OR13C6PQ8NH95 151 aa10.13□□□□□ -0.79
CHMP2A-203ENST00000597209 KRTDAPP60985 99 aa10.12□□□□□ -0.79
CHMP2A-203ENST00000597209 LINC00518Q8N0U6 118 aa10.12□□□□□ -0.79
CHMP2A-203ENST00000597209 TTTY13Q9BZ97 58 aa10.12□□□□□ -0.79
CHMP2A-203ENST00000597209 KRTAP13-3Q3SY46 172 aa10.11□□□□□ -0.79
CHMP2A-203ENST00000597209 Q8N377 158 aa10.1□□□□□ -0.79
CHMP2A-203ENST00000597209 ST20-AS1Q8NBB2 130 aa10.1□□□□□ -0.79
CHMP2A-203ENST00000597209 DHRS4-AS1Q9P1J3 65 aa10.1□□□□□ -0.79
CHMP2A-203ENST00000597209 C20orf202A1L168 122 aa10.09□□□□□ -0.79
CHMP2A-203ENST00000597209 SPRR1BP22528 89 aa10.09□□□□□ -0.79
CHMP2A-203ENST00000597209 SLC25A20O43772 301 aa10.08□□□□□ -0.8
CHMP2A-203ENST00000597209 AKR1D1P51857 326 aa10.08□□□□□ -0.8
CHMP2A-203ENST00000597209 C9orf153Q5TBE3 101 aa10.07□□□□□ -0.8
CHMP2A-203ENST00000597209 COPS9Q8WXC6 57 aa10.07□□□□□ -0.8
CHMP2A-203ENST00000597209 ELOF1P60002 83 aaKnown RBP10.06□□□□□ -0.8
CHMP2A-203ENST00000597209 SLC25A34Q6PIV7 304 aa10.06□□□□□ -0.8
CHMP2A-203ENST00000597209 SCGB1D4Q6XE38 83 aa10.06□□□□□ -0.8
CHMP2A-203ENST00000597209 IFITM1P13164 125 aa10.05□□□□□ -0.8
CHMP2A-203ENST00000597209 COX7BP24311 80 aa10.05□□□□□ -0.8
CHMP2A-203ENST00000597209 ANKRD39Q53RE8 183 aa10.05□□□□□ -0.8
CHMP2A-203ENST00000597209 Q6ZVH6 145 aa10.05□□□□□ -0.8
CHMP2A-203ENST00000597209 TRBV7-6A0A0J9YX20 115 aa10.03□□□□□ -0.8
CHMP2A-203ENST00000597209 C6orf99Q4VX62 202 aa10.03□□□□□ -0.8
CHMP2A-203ENST00000597209 SNRPEP62304 92 aaKnown RBP10.01□□□□□ -0.81
CHMP2A-203ENST00000597209 ASB16-AS1Q495Z4 193 aa10.01□□□□□ -0.81
CHMP2A-203ENST00000597209 LCE2AQ5TA79 106 aaPredicted RBP10.01□□□□□ -0.81
CHMP2A-203ENST00000597209 LAMTOR3Q9UHA4 124 aa10.01□□□□□ -0.81
CHMP2A-203ENST00000597209 ATOH7Q8N100 152 aa10□□□□□ -0.81
CHMP2A-203ENST00000597209 PCP2Q8IVA1 136 aa9.99□□□□□ -0.81
CHMP2A-203ENST00000597209 FAT4Q6V0I7 4981 aa9.98□□□□□ -0.81
CHMP2A-203ENST00000597209 A0A1B0GWB2 263 aa9.98□□□□□ -0.81
CHMP2A-203ENST00000597209 MUSTN1Q8IVN3 82 aa9.98□□□□□ -0.81
CHMP2A-203ENST00000597209 TAL2Q16559 108 aa9.97□□□□□ -0.81
CHMP2A-203ENST00000597209 TEX49A0A1B0GTD5 131 aa9.96□□□□□ -0.82
CHMP2A-203ENST00000597209 A6NDN8 102 aa9.96□□□□□ -0.82
CHMP2A-203ENST00000597209 SEC61BP60468 96 aaKnown RBP9.96□□□□□ -0.82
CHMP2A-203ENST00000597209 LIMD2Q9BT23 127 aa9.96□□□□□ -0.82
CHMP2A-203ENST00000597209 TRAV13-2A0A0B4J235 113 aa9.93□□□□□ -0.82
CHMP2A-203ENST00000597209 A4D1N5 150 aa9.93□□□□□ -0.82
CHMP2A-203ENST00000597209 CD164Q04900 197 aa9.93□□□□□ -0.82
CHMP2A-203ENST00000597209 XP32Q5T750 250 aa9.93□□□□□ -0.82
CHMP2A-203ENST00000597209 HIST3H2BBQ8N257 126 aa9.93□□□□□ -0.82
CHMP2A-203ENST00000597209 IGLV5-48A0A075B6I7 105 aa9.92□□□□□ -0.82
CHMP2A-203ENST00000597209 DEFB105AQ8NG35 78 aa9.92□□□□□ -0.82
CHMP2A-203ENST00000597209 HIST1H2BLQ99880 126 aa9.92□□□□□ -0.82
CHMP2A-203ENST00000597209 PRO1933Q9H354 126 aa9.92□□□□□ -0.82
CHMP2A-203ENST00000597209 LINC01547P58512 204 aaPredicted RBP9.91□□□□□ -0.82
CHMP2A-203ENST00000597209 Q1RN00 199 aa9.91□□□□□ -0.82
CHMP2A-203ENST00000597209 SMIM29Q86T20 159 aa9.91□□□□□ -0.82
CHMP2A-203ENST00000597209 S100A2P29034 98 aa9.9□□□□□ -0.82
CHMP2A-203ENST00000597209 HRCT1Q6UXD1 115 aa9.9□□□□□ -0.82
CHMP2A-203ENST00000597209 NHP2Q9NX24 153 aaKnown RBP9.89□□□□□ -0.83
CHMP2A-203ENST00000597209 S100A1P23297 94 aa9.88□□□□□ -0.83
CHMP2A-203ENST00000597209 SMIM11BQ8TCY0 68 aa9.88□□□□□ -0.83
CHMP2A-203ENST00000597209 HSBP1L1C9JCN9 74 aa9.87□□□□□ -0.83
CHMP2A-203ENST00000597209 Q5XG85 94 aa9.87□□□□□ -0.83
CHMP2A-203ENST00000597209 H7C2G1 150 aa9.86□□□□□ -0.83
CHMP2A-203ENST00000597209 KRTAP4-1Q9BYQ7 146 aa9.86□□□□□ -0.83
CHMP2A-203ENST00000597209 S100A6P06703 90 aa9.83□□□□□ -0.84
CHMP2A-203ENST00000597209 VAMP3Q15836 100 aa9.83□□□□□ -0.84
CHMP2A-203ENST00000597209 LINC00575Q6W349 94 aa9.8□□□□□ -0.84
CHMP2A-203ENST00000597209 KRTAP9-2Q9BYQ4 174 aa9.79□□□□□ -0.84
CHMP2A-203ENST00000597209 C1orf195Q5TG92 126 aa9.77□□□□□ -0.85
CHMP2A-203ENST00000597209 A0A0G2JQZ4 141 aa9.75□□□□□ -0.85
CHMP2A-203ENST00000597209 hADV29S1A0JD25 119 aa9.75□□□□□ -0.85
CHMP2A-203ENST00000597209 C9orf92A6NGG3 77 aa9.75□□□□□ -0.85
CHMP2A-203ENST00000597209 SCGB1D1O95968 90 aa9.75□□□□□ -0.85
CHMP2A-203ENST00000597209 F8WEM9 126 aa9.74□□□□□ -0.85
CHMP2A-203ENST00000597209 DLEU1O43261 78 aa9.73□□□□□ -0.85
CHMP2A-203ENST00000597209 COX8AP10176 69 aa9.73□□□□□ -0.85
CHMP2A-203ENST00000597209 Q6ZQY7 126 aa9.73□□□□□ -0.85
CHMP2A-203ENST00000597209 HIST1H4GQ99525 98 aa9.73□□□□□ -0.85
CHMP2A-203ENST00000597209 TCL1BO95988 128 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms