RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TRAV23DV6A0A075B6W5 121 aa6.61□□□□□ -1.35
LIG1-211ENST00000596457 IGLV6-57P01721 117 aa6.61□□□□□ -1.35
LIG1-211ENST00000596457 IFITM1P13164 125 aa6.61□□□□□ -1.35
LIG1-211ENST00000596457 SPRR1AP35321 89 aa6.61□□□□□ -1.35
LIG1-211ENST00000596457 LINC00337Q8N6G1 96 aa6.61□□□□□ -1.35
LIG1-211ENST00000596457 SMCR5Q8TEV8 140 aa6.61□□□□□ -1.35
LIG1-211ENST00000596457 COPS9Q8WXC6 57 aa6.61□□□□□ -1.35
LIG1-211ENST00000596457 LINC00518Q8N0U6 118 aa6.6□□□□□ -1.35
LIG1-211ENST00000596457 PAM16Q9Y3D7 125 aa6.6□□□□□ -1.35
LIG1-211ENST00000596457 LRP2P98164 4655 aa6.59□□□□□ -1.35
LIG1-211ENST00000596457 B5MCH6 92 aa6.59□□□□□ -1.35
LIG1-211ENST00000596457 CRYGAP11844 174 aa6.59□□□□□ -1.35
LIG1-211ENST00000596457 RPL13AP40429 203 aaKnown RBP6.59□□□□□ -1.35
LIG1-211ENST00000596457 SPATA45Q537H7 98 aa6.59□□□□□ -1.35
LIG1-211ENST00000596457 Q6ZVH6 145 aa6.59□□□□□ -1.35
LIG1-211ENST00000596457 A0A087X002 238 aa6.58□□□□□ -1.36
LIG1-211ENST00000596457 A6NDN8 102 aa6.58□□□□□ -1.36
LIG1-211ENST00000596457 KRTAP4-16G5E9R7 235 aaPredicted RBP6.58□□□□□ -1.36
LIG1-211ENST00000596457 ZNF73O43830 326 aaPredicted RBP6.58□□□□□ -1.36
LIG1-211ENST00000596457 HINT1P49773 126 aaPredicted RBP6.58□□□□□ -1.36
LIG1-211ENST00000596457 JOSD1Q15040 202 aaPredicted RBP6.58□□□□□ -1.36
LIG1-211ENST00000596457 TYMSOSQ8TAI1 123 aa6.58□□□□□ -1.36
LIG1-211ENST00000596457 C14orf144Q96I85 54 aa6.58□□□□□ -1.36
LIG1-211ENST00000596457 VAMP8Q9BV40 100 aa6.58□□□□□ -1.36
LIG1-211ENST00000596457 COX8AP10176 69 aa6.57□□□□□ -1.36
LIG1-211ENST00000596457 PPDPFQ9H3Y8 114 aa6.57□□□□□ -1.36
LIG1-211ENST00000596457 CBY1Q9Y3M2 126 aa6.57□□□□□ -1.36
LIG1-211ENST00000596457 MUC2Q02817 5179 aa6.57□□□□□ -1.36
LIG1-211ENST00000596457 Q6ZRX8 168 aa6.56□□□□□ -1.36
LIG1-211ENST00000596457 SPRR4Q96PI1 79 aa6.56□□□□□ -1.36
LIG1-211ENST00000596457 HIST1H4GQ99525 98 aa6.56□□□□□ -1.36
LIG1-211ENST00000596457 ZNF706Q9Y5V0 76 aaPredicted RBP6.56□□□□□ -1.36
LIG1-211ENST00000596457 ERC2-IT1O76042 136 aa6.55□□□□□ -1.36
LIG1-211ENST00000596457 KRTAP13-2Q52LG2 175 aa6.55□□□□□ -1.36
LIG1-211ENST00000596457 Q9BRP9 147 aa6.55□□□□□ -1.36
LIG1-211ENST00000596457 TSPAN13O95857 204 aa6.54□□□□□ -1.36
LIG1-211ENST00000596457 FAM229BQ4G0N7 80 aa6.54□□□□□ -1.36
LIG1-211ENST00000596457 GAGE2AQ6NT46 116 aa6.54□□□□□ -1.36
LIG1-211ENST00000596457 TNXBP22105 4242 aa6.54□□□□□ -1.36
LIG1-211ENST00000596457 TRAV13-2A0A0B4J235 113 aa6.53□□□□□ -1.36
LIG1-211ENST00000596457 A4D1N5 150 aa6.53□□□□□ -1.36
LIG1-211ENST00000596457 COX7BP24311 80 aa6.53□□□□□ -1.36
LIG1-211ENST00000596457 C6orf99Q4VX62 202 aa6.53□□□□□ -1.36
LIG1-211ENST00000596457 SLC25A34Q6PIV7 304 aa6.53□□□□□ -1.36
LIG1-211ENST00000596457 C3orf22Q8N5N4 141 aa6.53□□□□□ -1.36
LIG1-211ENST00000596457 C12orf57Q99622 126 aa6.53□□□□□ -1.36
LIG1-211ENST00000596457 DLEU1O43261 78 aa6.52□□□□□ -1.37
LIG1-211ENST00000596457 PYY3Q5JQD4 70 aa6.52□□□□□ -1.37
LIG1-211ENST00000596457 FAT4Q6V0I7 4981 aa6.51□□□□□ -1.37
LIG1-211ENST00000596457 ST20-AS1Q8NBB2 130 aa6.51□□□□□ -1.37
LIG1-211ENST00000596457 IGLV9-49A0A0B4J1Y8 123 aa6.49□□□□□ -1.37
LIG1-211ENST00000596457 ELOF1P60002 83 aaKnown RBP6.49□□□□□ -1.37
LIG1-211ENST00000596457 SMIM11BQ8TCY0 68 aa6.49□□□□□ -1.37
LIG1-211ENST00000596457 DHRS4-AS1Q9P1J3 65 aa6.49□□□□□ -1.37
LIG1-211ENST00000596457 C2orf91Q6ZV80 131 aa6.48□□□□□ -1.37
LIG1-211ENST00000596457 LINC00304Q8N9R0 145 aa6.48□□□□□ -1.37
LIG1-211ENST00000596457 HIGD1BQ9P298 99 aa6.48□□□□□ -1.37
LIG1-211ENST00000596457 A0A1B0GWB2 263 aa6.47□□□□□ -1.37
LIG1-211ENST00000596457 DEFB105AQ8NG35 78 aa6.47□□□□□ -1.37
LIG1-211ENST00000596457 TRBV7-6A0A0J9YX20 115 aa6.46□□□□□ -1.38
LIG1-211ENST00000596457 H7C2G1 150 aa6.46□□□□□ -1.38
LIG1-211ENST00000596457 TAL2Q16559 108 aa6.46□□□□□ -1.38
LIG1-211ENST00000596457 LINC00483Q53H64 154 aa6.46□□□□□ -1.38
LIG1-211ENST00000596457 RAB37Q96AX2 223 aa6.46□□□□□ -1.38
LIG1-211ENST00000596457 MOBPQ13875 183 aa6.45□□□□□ -1.38
LIG1-211ENST00000596457 VAMP3Q15836 100 aa6.45□□□□□ -1.38
LIG1-211ENST00000596457 PRR4Q16378 134 aa6.45□□□□□ -1.38
LIG1-211ENST00000596457 C4orf48Q5BLP8 95 aa6.45□□□□□ -1.38
LIG1-211ENST00000596457 C9orf153Q5TBE3 101 aa6.45□□□□□ -1.38
LIG1-211ENST00000596457 Q8NBF4 154 aa6.45□□□□□ -1.38
LIG1-211ENST00000596457 CFC1BP0CG36 223 aa6.44□□□□□ -1.38
LIG1-211ENST00000596457 CFC1P0CG37 223 aa6.44□□□□□ -1.38
LIG1-211ENST00000596457 CEND1Q8N111 149 aa6.44□□□□□ -1.38
LIG1-211ENST00000596457 SLC25A20O43772 301 aa6.42□□□□□ -1.38
LIG1-211ENST00000596457 RETNLBQ9BQ08 111 aa6.42□□□□□ -1.38
LIG1-211ENST00000596457 Q1RN00 199 aa6.41□□□□□ -1.38
LIG1-211ENST00000596457 NHP2Q9NX24 153 aaKnown RBP6.41□□□□□ -1.38
LIG1-211ENST00000596457 UQCR10Q9UDW1 63 aa6.41□□□□□ -1.38
LIG1-211ENST00000596457 LAMTOR3Q9UHA4 124 aa6.41□□□□□ -1.38
LIG1-211ENST00000596457 TEX49A0A1B0GTD5 131 aa6.4□□□□□ -1.38
LIG1-211ENST00000596457 TMEM238LA0A1B0GVL6 79 aa6.4□□□□□ -1.38
LIG1-211ENST00000596457 A6NJY4 79 aa6.4□□□□□ -1.38
LIG1-211ENST00000596457 FXYD2P54710 66 aa6.4□□□□□ -1.38
LIG1-211ENST00000596457 SPAG11AQ6PDA7 123 aa6.4□□□□□ -1.38
LIG1-211ENST00000596457 SSBP3-AS1Q7Z2R9 100 aa6.4□□□□□ -1.38
LIG1-211ENST00000596457 PRO1933Q9H354 126 aa6.4□□□□□ -1.38
LIG1-211ENST00000596457 A0A0B4J2C4 111 aa6.39□□□□□ -1.39
LIG1-211ENST00000596457 hADV29S1A0JD25 119 aa6.39□□□□□ -1.39
LIG1-211ENST00000596457 SPRR1BP22528 89 aa6.39□□□□□ -1.39
LIG1-211ENST00000596457 HSD52Q0P140 79 aa6.39□□□□□ -1.39
LIG1-211ENST00000596457 BVES-AS1Q5T3Y7 98 aa6.39□□□□□ -1.39
LIG1-211ENST00000596457 LINC00575Q6W349 94 aa6.39□□□□□ -1.39
LIG1-211ENST00000596457 HRCT1Q6UXD1 115 aa6.38□□□□□ -1.39
LIG1-211ENST00000596457 PRO1854Q9UHT4 67 aa6.37□□□□□ -1.39
LIG1-211ENST00000596457 LINC01547P58512 204 aaPredicted RBP6.36□□□□□ -1.39
LIG1-211ENST00000596457 Q6ZQY7 126 aa6.36□□□□□ -1.39
LIG1-211ENST00000596457 SPINK1P00995 79 aa6.35□□□□□ -1.39
LIG1-211ENST00000596457 CTAG1AP78358 180 aa6.35□□□□□ -1.39
LIG1-211ENST00000596457 Q8N377 158 aa6.35□□□□□ -1.39
LIG1-211ENST00000596457 IGLV5-48A0A075B6I7 105 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms